GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001774-TA|BGIBMGA001774-PA|undefined
         (57 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   0.39 
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          23   0.39 
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   2.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   3.6  

>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 0.39
 Identities = 8/12 (66%), Positives = 9/12 (75%)

Query: 16  PGHDEFGHHVSL 27
           P +DEFGH V L
Sbjct: 520 PKYDEFGHEVDL 531


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.6 bits (46), Expect = 0.39
 Identities = 8/12 (66%), Positives = 9/12 (75%)

Query: 16  PGHDEFGHHVSL 27
           P +DEFGH V L
Sbjct: 146 PKYDEFGHEVDL 157


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.2 bits (40), Expect = 2.1
 Identities = 8/19 (42%), Positives = 8/19 (42%)

Query: 5  GVITAQKPKACPGHDEFGH 23
          G I    P   PGHD   H
Sbjct: 17 GEIAHNDPHFAPGHDAIVH 35


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 6/13 (46%), Positives = 7/13 (53%)

Query: 16  PGHDEFGHHVSLH 28
           P H +  HH S H
Sbjct: 809 PPHQQLHHHQSTH 821


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.132    0.467 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,194
Number of Sequences: 429
Number of extensions: 513
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 57
length of database: 140,377
effective HSP length: 37
effective length of query: 20
effective length of database: 124,504
effective search space:  2490080
effective search space used:  2490080
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.3 bits)
S2: 35 (18.2 bits)