Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001773-TA|BGIBMGA001773-PA|IPR004097|DHHA2
(329 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F3.11 |||exopolyphosphatase |Schizosaccharomyces pombe|chr ... 71 3e-13
SPAC139.03 |||transcription factor, zf-fungal binuclear cluster ... 33 0.042
SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces pom... 28 2.1
SPAC23G3.11 |rpn6||19S proteasome regulatory subunit Rpn6|Schizo... 27 3.7
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 27 3.7
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 27 4.9
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 27 4.9
SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase family|... 27 4.9
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 6.4
SPAC24H6.03 |cul3|pcu3|cullin 3|Schizosaccharomyces pombe|chr 1|... 26 8.5
>SPAC2F3.11 |||exopolyphosphatase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 384
Score = 70.5 bits (165), Expect = 3e-13
Identities = 79/259 (30%), Positives = 115/259 (44%), Gaps = 35/259 (13%)
Query: 8 NINIVIGNESCDLDSAVCSIVYALYLNWQHNQIKCKVCTKDKRGASSKDDIFIPILNMVR 67
+ + V GNES DLDS SIVYA L Q Q+ I +P N+ R
Sbjct: 29 SFSFVSGNESADLDSCASSIVYAYCL--QRKQL---------------GRIVVPFFNIPR 71
Query: 68 QDFALKTEVMYLFNKLGITEGDLIFRNDYDLCSLLRDSKCN-VVLVDHHVLAANDV-FLS 125
++ L+ E+ YL N I+ D++F + D+ L + N + LVDH+ L D+ +
Sbjct: 72 KELRLRPELSYLLNLASISSDDIVFLD--DIVKLPKRIFSNPIYLVDHNSLDRKDLENFN 129
Query: 126 AFVTEIIDHRPLDKSRWTYKGDTRLIIEIVGSCATLVTRRIKEMCLLL--GKEFQFFKDH 183
+ IIDH D+ + D R IIE GSC TLV R + L K + +
Sbjct: 130 GSIAGIIDHHK-DEG-GSLHADPR-IIEECGSCCTLVCRYFMPVIRSLYDSKVSELHQTA 186
Query: 184 MPCSQMLYSTIILDTVNFSKEFNKGTPEDEEMI-DLLERVLMIENPID-ERQRVLDELTK 241
+ + I++DT N E K T D +++ DL V P D R D L +
Sbjct: 187 TNLAVLALGPILIDTGNLKNE--KTTDTDVKIVNDLCSFV-----PKDWVRDEFFDTLKE 239
Query: 242 AKSDVSKLTASQLLRKDVK 260
K + LLR+D+K
Sbjct: 240 KKKSCKGFSFDDLLRRDLK 258
>SPAC139.03 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 33.5 bits (73), Expect = 0.042
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 163 TRRIKEMCLLLGKEFQFFKDH-MPCSQML-----YSTIILDT--VNFSKEFNKGTPEDEE 214
+RR CL ++ + DH PCS L S I +D N+ K F +G+ DE
Sbjct: 16 SRRAIHSCLACRRK-KLKCDHGRPCSNCLKRSTIQSCIYIDPGKTNYDKRFERGSEADEL 74
Query: 215 MIDLLERVLMIENPIDE 231
+ LL RV M+E ++E
Sbjct: 75 IDQLLSRVSMLEKRLNE 91
>SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1185
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 49 KRGASSKDDIFIPILNMVRQDFALKTEVMYLFNKLGITEGDLIFRNDYDLCSLL 102
K GA K I +L+ ++ + + + L + +GD + N DLC++L
Sbjct: 1131 KEGAKVKKGDIIAVLSAMKMEIVISAPHSGVLKSLAVVQGDSV--NGGDLCAVL 1182
>SPAC23G3.11 |rpn6||19S proteasome regulatory subunit
Rpn6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 27.1 bits (57), Expect = 3.7
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 201 FSKEFNKGTPEDEEMIDLLERVLMIENPIDERQRVLDELTKAKSDVSKLTASQLLRKDVK 260
+ + NKG +DE++ + E+ L + + R+ ++L + L A+ K K
Sbjct: 26 YKEVLNKGVSKDEKVANEQEQALTNLSDLYVRENRHNDLAQLVQQSRPLMANFSKAKSAK 85
Query: 261 IVEDVLIPSFPMLVEEF-LRLDDAVDAVKEVLSQRECLVALLLGMDLTS 308
IV LI F + L+++ A D +K + ++ + L L S
Sbjct: 86 IVR-TLIDKFSGEKKSLPLQIEVANDCIKWAIKEKRTFLRQALETKLIS 133
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 261 IVEDVLIPSFPMLVEEFLRLDDAVDAVKEVLSQRECLVALLLG 303
I+ + ++P FP+++E L A + +K+ +RE L L LG
Sbjct: 1233 IILEKILPCFPLIIESGSALKRAAERLKDE-EKREDLKVLALG 1274
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 159 ATLVTRRIKEMCLLLGKEFQFFKDHMPCSQMLYSTIILDTVNFSKEFNKGTPEDEEMIDL 218
+ +V + I E ++ + F + K+H PC + +D + + F++GT D E+
Sbjct: 200 SAIVDKYIGESARIIREMFGYAKEHEPCVIFMDE---IDAIG-GRRFSEGTSADREIQRT 255
Query: 219 LERVL 223
L +L
Sbjct: 256 LMELL 260
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 253 QLLRKDVKIVEDVLIPSFPMLVEEFLRLDDAVDAVKEVLSQRECLVALLLGM 304
Q L + ++++E S+P L + ++V A+KE + L+ LLLG+
Sbjct: 789 QRLTRILELLETKNAASYPKLASPLFEVLNSVIALKEDIVSSNYLLQLLLGL 840
>SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 336
Score = 26.6 bits (56), Expect = 4.9
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 194 IILDTVNFSKEFNKGTPEDEEMIDLLERVLMIENPIDERQRVLDELTKAKSDVSKLTASQ 253
+I+ V+ S F+ G +D E+I + +EN D + ++LD K + L A+Q
Sbjct: 57 VIVKDVSASNAFD-GVLKDVELICHIASPFFVENVTDNKSQLLDPAVKGTLGI--LEAAQ 113
Query: 254 LLRKDVKIV 262
++ +IV
Sbjct: 114 GVKSIKRIV 122
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.2 bits (55), Expect = 6.4
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 238 ELTKAKSDVSKLTAS-QLLRKDVKIVEDVLIPSFPMLVEEFLRLDDAVDAVKEVLSQREC 296
ELTK+ DV +LTA+ + L +D K ++ SF LV + + + +++ +
Sbjct: 753 ELTKSSEDVKRLTANVETLTQDSKAMKQ----SFTSLVNSYQSISNLYHELRDDHVNMQS 808
Query: 297 LVALLLGMDLTSGMKRDMAVMSPNNENLAEKV 328
LL + S +K D ++ N L + V
Sbjct: 809 QNNTLL--ESESKLKTDCENLTQQNMTLIDNV 838
>SPAC24H6.03 |cul3|pcu3|cullin 3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 785
Score = 25.8 bits (54), Expect = 8.5
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 146 GDTRLIIEIVGSCATLVTRRIKEMCLLLGKEFQFFKDHMPCSQMLYSTI-ILDTVNFSKE 204
G+ L I S +T +R ++ L +KDH+ QM+ S + LD V +SK
Sbjct: 95 GNALLDIRKNDSYSTSWSRSLEAAHRFLSSLVNSWKDHIVSMQMISSVLKYLDKV-YSKS 153
Query: 205 FNKGTPEDEEMIDLLERVLMIEN 227
+K P +E I + V+++ +
Sbjct: 154 ADK-VPVNENGIYIFREVVLLNS 175
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.322 0.138 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,495,464
Number of Sequences: 5004
Number of extensions: 63140
Number of successful extensions: 176
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 171
Number of HSP's gapped (non-prelim): 11
length of query: 329
length of database: 2,362,478
effective HSP length: 73
effective length of query: 256
effective length of database: 1,997,186
effective search space: 511279616
effective search space used: 511279616
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 54 (25.8 bits)
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