Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001773-TA|BGIBMGA001773-PA|IPR004097|DHHA2
(329 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1743 + 39601644-39602023,39602301-39602734,39602828-396030... 40 0.004
07_01_0523 - 3879550-3880134,3880313-3880491,3881519-3882383 32 0.55
06_01_0182 + 1413551-1413794,1413883-1414139,1414241-1414387,141... 32 0.55
02_02_0539 - 11315788-11315841,11316620-11316700,11316728-11317711 32 0.55
08_02_0277 - 15226062-15226169,15227075-15227203,15227416-152275... 31 1.3
02_01_0754 - 5595813-5595887,5595973-5596071,5596136-5596327,559... 31 1.3
11_04_0442 - 17790811-17790889,17791047-17791114,17791144-177911... 30 2.2
06_03_0711 + 23798998-23799106,23799838-23799957,23800181-238003... 30 2.2
01_06_0795 - 32051794-32053362,32053452-32053595,32054102-320549... 30 2.2
06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701... 30 3.0
04_04_0919 - 29422003-29422267,29422411-29422660,29423163-294234... 29 3.9
01_06_1713 - 39359558-39359590,39360000-39360074,39360437-393606... 29 6.8
06_03_0291 + 19198302-19198333,19199218-19199734,19200171-192003... 28 9.0
04_01_0532 - 6938763-6941177 28 9.0
>01_06_1743 +
39601644-39602023,39602301-39602734,39602828-39603006,
39603636-39603716,39603828-39603914,39604000-39604006,
39604241-39604312,39604712-39604792,39605156-39605262
Length = 475
Score = 39.5 bits (88), Expect = 0.004
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 52 ASSKD-DIFIPILNMVRQDFALKTEVMYLFNKLGITEGDLIFRNDYDLCSLLRDSKCNVV 110
AS +D + +P++NM R + +L + +G+ L+F ++ D+ L+ D + ++V
Sbjct: 287 ASKEDAEAAVPVVNMRRGRMERCRQAAWLLHHVGVDASALLFADEVDMEGLMMDKRVSLV 346
Query: 111 LVDHHVLAAND 121
+V VL ND
Sbjct: 347 VVGQDVLKPND 357
>07_01_0523 - 3879550-3880134,3880313-3880491,3881519-3882383
Length = 542
Score = 32.3 bits (70), Expect = 0.55
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 220 ERVLMIENPIDERQRVLDELTKAKSDVSKLTAS 252
+R L E P+++ QR L+EL KAK++ K T+S
Sbjct: 376 DRKLEAEFPLEDLQRQLEELEKAKTEKKKATSS 408
>06_01_0182 +
1413551-1413794,1413883-1414139,1414241-1414387,
1414487-1414804
Length = 321
Score = 32.3 bits (70), Expect = 0.55
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 235 VLDELTKAKSDVSKLTASQLLRKDVKIVEDVLIPSFPMLVEEFLRLDDAVDAVKEVLSQR 294
V E+ K V+ L AS +RK K+ E+ ++ +L+ E L+L DAV A +V +QR
Sbjct: 157 VTAEVDKLAPKVAALDAS--VRKGEKVAENDVVQVTELLMNELLKL-DAVVADGDVKAQR 213
Query: 295 ECLVALLLGM--DLTSGMKRDMAVMSPNNENLAEK 327
V + L + M ++ A++ + E L K
Sbjct: 214 RLQVKRVQKYVETLDAVMAKNAAIVRKSGEKLTSK 248
>02_02_0539 - 11315788-11315841,11316620-11316700,11316728-11317711
Length = 372
Score = 32.3 bits (70), Expect = 0.55
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 230 DERQRVLDELTKAKSDVSKLTASQLLRKDVKIVEDVLIPSFPM--LVEEFLRLDDAVDAV 287
+ERQR+ DEL + + + K Q+L +++ I E++L + + DD VD
Sbjct: 176 EERQRLEDELHRKRLEDRKAQTRQILLQEI-INEELLAANTASDEAAINGVDTDDEVDQA 234
Query: 288 KEVLSQRECLVALLLGMDLTSGMKRDMAVMSPNN 321
+E S R +A + + SG+ D ++M N
Sbjct: 235 EEYESWRRREMARIKRIREESGIDDDKSIMEDEN 268
>08_02_0277 -
15226062-15226169,15227075-15227203,15227416-15227583,
15227665-15228123,15228865-15229008
Length = 335
Score = 31.1 bits (67), Expect = 1.3
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 211 EDEEMIDLLERVLMIENPIDERQRVLDELTKAKSDVSKLTASQLLRKDVKIVEDVLIPSF 270
+DEE+ D+ ++VL E + V+ TK +SD +K A Q K + V D L +
Sbjct: 163 KDEEVKDMKDKVL---RSYAEMENVIAR-TKRESDNAKKYAVQGFSKSLLDVADNLSRAS 218
Query: 271 PMLVEEFLRLDDAVDAVKEVLSQRECLVALLLGMDLT 307
++ E F ++D + ++ + V + L LL G+++T
Sbjct: 219 SVVKESFSKIDTSNESAEAV----KLLNTLLEGVEMT 251
>02_01_0754 -
5595813-5595887,5595973-5596071,5596136-5596327,
5596992-5597129,5597415-5597501,5597583-5597669,
5597795-5597956,5598089-5598225,5598483-5598602,
5600668-5600773
Length = 400
Score = 31.1 bits (67), Expect = 1.3
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 152 IEIVGSCATLVTRRIKEMCLLLGKEFQFFKDHMPCSQMLYSTIILDTVNFSKEFNKGTPE 211
++IV S ++ + I E L+ + F + +DH PC + +D + + F++GT
Sbjct: 203 LKIVSSA--IIDKYIGESARLIREMFGYARDHQPCIIFMDE---IDAIG-GRRFSEGTSA 256
Query: 212 DEEMIDLLERVLMIENPIDERQRVLDELTKAKSDV 246
D E+ L +L + DE +V + + DV
Sbjct: 257 DREIQRTLMELLNQLDGFDELGKVKMIMATNRPDV 291
>11_04_0442 - 17790811-17790889,17791047-17791114,17791144-17791166,
17791210-17795913,17797414-17797624,17798478-17798666
Length = 1757
Score = 30.3 bits (65), Expect = 2.2
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 8/67 (11%)
Query: 3 SNDYDNINIVIGNESCDLDSAVCSIVYALYL-NWQHNQ-------IKCKVCTKDKRGASS 54
S DY + + +L A CS + NW N IK VCT K SS
Sbjct: 1408 SEDYCKLWSTWESSVSELSKADCSAFWKFVATNWGQNMNKLLSGCIKVPVCTDGKIILSS 1467
Query: 55 KDDIFIP 61
K D+FIP
Sbjct: 1468 KKDVFIP 1474
>06_03_0711 +
23798998-23799106,23799838-23799957,23800181-23800317,
23800418-23800579,23800707-23800793,23800872-23800958,
23801317-23801454,23802023-23802214,23802287-23802385,
23802490-23802564
Length = 401
Score = 30.3 bits (65), Expect = 2.2
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 152 IEIVGSCATLVTRRIKEMCLLLGKEFQFFKDHMPCSQMLYSTIILDTVNFSKEFNKGTPE 211
++IV S ++ + I E L+ + F + ++H PC + +D + + F++GT
Sbjct: 204 LKIVSSA--IIDKYIGESARLIREMFSYAREHQPCIIFMDE---IDAIG-GRRFSEGTSA 257
Query: 212 DEEMIDLLERVLMIENPIDERQRVLDELTKAKSDV 246
D E+ L +L + DE +V + + DV
Sbjct: 258 DREIQRTLMELLNQLDGFDELGKVKMIMATNRPDV 292
>01_06_0795 -
32051794-32053362,32053452-32053595,32054102-32054965,
32055335-32055892
Length = 1044
Score = 30.3 bits (65), Expect = 2.2
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Query: 184 MPCSQMLYSTIILDT--VNFSKEFNKGTPEDEEMIDLLERVLMIENPIDERQRVLDELTK 241
MP + YS II + K N+G E + + IE +DE +L+ + +
Sbjct: 516 MPATLAQYSKIIQNPSYAELQKAANQGRRCTWEKLSAIRANCAIELVLDECVALLNHMRR 575
Query: 242 AKSDVSKLTASQLLRKDVKIVEDVLIPSFPMLVEE 276
K + ASQ +++ IPS+ ++ E
Sbjct: 576 LKRSAERAAASQGHGPTIRLCPSRRIPSWNLIARE 610
>06_03_1511 - 30669292-30669401,30669894-30669930,30670012-30670107,
30670186-30670281,30670679-30670828,30670956-30671100,
30671178-30671251,30671325-30671445,30671697-30671821,
30671898-30672047,30672249-30672324,30672496-30672557,
30672597-30672839,30673354-30673683,30673776-30673932,
30674008-30674139,30674219-30674277,30674734-30674798,
30674878-30675094,30675413-30675499,30675655-30675750,
30675938-30676003,30676096-30676287,30676380-30676532,
30676812-30677052,30677322-30677515,30678212-30678348,
30678474-30678480,30678708-30678830,30679370-30679427,
30680018-30680090,30680493-30681765
Length = 1714
Score = 29.9 bits (64), Expect = 3.0
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 230 DERQRVLDELTKAKSDVSKLTASQLLRKDVKIVEDVLIPSF-PMLVEEFLRLDDAVDAVK 288
++ +++ELT D L +L ++ +VE+ L SF E L +++ VK
Sbjct: 947 NDYDNIVEELTGILKDGESLGVKGMLFEEFSVVEEELKKSFCRKQASEALATQTSMEVVK 1006
Query: 289 EVLSQRECL 297
EVL + L
Sbjct: 1007 EVLKEASIL 1015
>04_04_0919 -
29422003-29422267,29422411-29422660,29423163-29423481,
29423625-29424794,29424879-29425388,29425449-29425607
Length = 890
Score = 29.5 bits (63), Expect = 3.9
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 159 ATLVTRRIKEMCLLLGKEFQFFKDHMPCSQML---YSTIILDTV---NFSKEFNKGTPED 212
++ V R ++C L + FQ H+P S +L Y+ IIL T NF K +K +
Sbjct: 425 SSFVRSRFHDICQKLSRCFQTILSHVPKSVILEKNYNNIILLTTMLENFRKLLSKNSAAG 484
Query: 213 EEMI 216
+E++
Sbjct: 485 DEVL 488
>01_06_1713 - 39359558-39359590,39360000-39360074,39360437-39360662,
39360792-39360880,39360960-39361053,39361134-39361318,
39361415-39361582,39361682-39361822,39362327-39362545,
39362628-39362744,39363154-39363248,39363662-39363743,
39363864-39363926,39364157-39364216,39364312-39364476,
39364574-39364759,39364890-39365180,39365262-39365405,
39365492-39366172,39367045-39367362
Length = 1143
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 212 DEEMIDLLERVLMIENPIDERQRVLDELTKAKSDVSKLTASQLLRKDVKIVEDVLIP 268
++E DL+ + +IEN + + V++EL + K + K+T + + KD + L+P
Sbjct: 989 EDEYNDLMSKKNIIENDKSKIKTVIEELDEKKKETLKVTWLK-VNKDFGSIFSTLLP 1044
>06_03_0291 +
19198302-19198333,19199218-19199734,19200171-19200383,
19201067-19201111,19201671-19201945,19202041-19202152,
19202453-19202539,19202727-19202963,19204127-19204825
Length = 738
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Query: 16 ESCDLDSAVCSIVYALYLNWQHNQIKCKVCTK-DKRGASSKDDIFIPILNMVRQDFALKT 74
+ C +S VC+ Y LY + N I C D I++P LN V Q
Sbjct: 289 DMCSNNSTVCNQAY-LYCGDKENSILRTACLPIDSNDIDPNFGIYVPALNNVSQSTNFLA 347
Query: 75 EVMY 78
++ Y
Sbjct: 348 KLFY 351
>04_01_0532 - 6938763-6941177
Length = 804
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 250 TASQLLRKDVKIVEDVLIPSFPMLVEEFLRLDDAVDAVKEVL 291
T + RKDV+ ++ P P+ + L+ A D KEVL
Sbjct: 479 TYCTITRKDVQPLQPSRDPGLPLKAFSYAELEKATDGFKEVL 520
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.138 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,843,983
Number of Sequences: 37544
Number of extensions: 352187
Number of successful extensions: 851
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 846
Number of HSP's gapped (non-prelim): 15
length of query: 329
length of database: 14,793,348
effective HSP length: 82
effective length of query: 247
effective length of database: 11,714,740
effective search space: 2893540780
effective search space used: 2893540780
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
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