Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001773-TA|BGIBMGA001773-PA|IPR004097|DHHA2
(329 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54892| Best HMM Match : DHH (HMM E-Value=0.057) 96 3e-20
SB_28734| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.080
SB_20744| Best HMM Match : CH (HMM E-Value=0.92) 34 0.14
SB_46807| Best HMM Match : DUF827 (HMM E-Value=0.28) 33 0.24
SB_20508| Best HMM Match : Filament (HMM E-Value=0.037) 32 0.74
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_3124| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_53736| Best HMM Match : Borrelia_orfA (HMM E-Value=0.64) 29 4.0
SB_30499| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_17069| Best HMM Match : Transposase_8 (HMM E-Value=7.7) 29 4.0
SB_18760| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_22035| Best HMM Match : LPP (HMM E-Value=4.9e-10) 29 6.9
SB_17140| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
>SB_54892| Best HMM Match : DHH (HMM E-Value=0.057)
Length = 384
Score = 96.3 bits (229), Expect = 3e-20
Identities = 58/190 (30%), Positives = 104/190 (54%), Gaps = 15/190 (7%)
Query: 56 DDIFIPILNMVRQDFALKTEVMYLFNKLGITEGDLIFRNDYDLCSLLRDSKCNVVLVDHH 115
+ IF+P+LN+ R DF L+TE+ Y F + GI DL+F +++D+ +L + V LVDH+
Sbjct: 4 EKIFLPVLNIPRADFPLRTEITYTFARFGINLKDLVFTDEFDMTALKTKGELAVTLVDHN 63
Query: 116 VLAANDVFLSAFVTEIIDHRPLDKSRWTYKGDTRLIIEIVGSCATLVTRRIKEMCLLLGK 175
+LA + L + + E+IDH + + K IE VGSC+TL+ +I L
Sbjct: 64 LLARHQQGLISVLVEVIDHHKDELAPHVKK-----TIEPVGSCSTLIAEKI------LSN 112
Query: 176 EFQFFKDHMPCSQMLYSTIILDTVNFSKEFNKGTPEDEEMIDLLERVLMIENPIDERQRV 235
+ + + + +L S I+LD+VN + TP+D+ ++ L+ ++ ++E
Sbjct: 113 KPDLLDNQV--TGLLLSAILLDSVNLDPRAGRMTPKDQHIVQALQD--KVKFNLEELYHS 168
Query: 236 LDELTKAKSD 245
++E TK ++
Sbjct: 169 VNEATKRNTE 178
>SB_28734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 35.1 bits (77), Expect = 0.080
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 152 IEIVGSCATLVTRRIKEMCLLLGKEFQFFKDHMPCSQMLYSTIILDTVNFSKEFNKGTPE 211
IE VGSC+TL+ +I L + + + + +L S I+LD+VN + TP+
Sbjct: 15 IEPVGSCSTLIAEKI------LSNKPDLLDNQV--TGLLLSAILLDSVNLDPRAGRMTPK 66
Query: 212 DEEMIDLLE 220
D+ ++ L+
Sbjct: 67 DQHIVQALQ 75
>SB_20744| Best HMM Match : CH (HMM E-Value=0.92)
Length = 1103
Score = 34.3 bits (75), Expect = 0.14
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 213 EEMIDLLERVLMIENPIDERQRVLDELTK--AKSDVSKLTASQLLRKDVKIVEDVLIPSF 270
+++ L++ +++ + ID Q V+D + + D+S ++A ++ K +I L+ F
Sbjct: 198 DDLQGLIKNPVLVSDQIDNCQHVIDAIANDVLRVDLSHISAKGIV-KGARIDIRNLLEIF 256
Query: 271 PMLVEEFLRLDDAVDAVKEVLSQRECLVALLLGMDLTSGMKRD 313
L+E F DD +EV + L D+ SG+ R+
Sbjct: 257 TGLLEYFFEFDDEQGESEEVPEEENDSNILTSDHDIMSGVLRE 299
>SB_46807| Best HMM Match : DUF827 (HMM E-Value=0.28)
Length = 558
Score = 33.5 bits (73), Expect = 0.24
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Query: 157 SCATLVTRRIKEMCLLLGKEFQFFKDHMPCSQMLYSTIILDTVNFSKEF---NKGTPEDE 213
S L R++ + L KE FK ++ L + NF E N D
Sbjct: 35 SSVALSRHRLQWLVQHLTKENNSFKGITEENKNLKQMLDCTERNFEAELRQINDAAKADH 94
Query: 214 EMIDLLERVLMIENPIDERQRVLDELTKAKSDVSKLTASQLLRKDVKIV 262
E+++ + M ++ DE L E TK D+S+L QL RKD +++
Sbjct: 95 EVMENALKDAMRQH--DETVARLQETTKTLDDLSQLVTEQLKRKDQEVI 141
>SB_20508| Best HMM Match : Filament (HMM E-Value=0.037)
Length = 722
Score = 31.9 bits (69), Expect = 0.74
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 175 KEFQFFKDHMPCSQMLYSTIILDTVNFSKEFNKGTPEDEEMIDLLERVLMIENPID-ERQ 233
KE F+K+H Q ST V + + + T E + LLE + ++ +
Sbjct: 431 KERDFYKEHENAQQSETSTFKTQLVEQTSQLHAITQELASLKTLLETTAKEKETLEVSEK 490
Query: 234 RVLDELTKAKSDV-SKLTASQLLRKDVKIVEDVL 266
+L E++ KS K++ ++L K++K ++ L
Sbjct: 491 NLLQEVSALKSSFEEKVSELRVLSKELKTAQETL 524
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 220 ERVLMIENPIDERQRVLDELTKAKSDVSKLTASQLLRKDVKIVEDVL 266
E + N I E+++++D L K+ S+ ++LR+D+K++ED +
Sbjct: 234 ETAIKHRNAIMEKEQIIDCLNKSLKTASE--DIEILRRDIKVLEDAI 278
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 29.9 bits (64), Expect = 3.0
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 190 LYSTII-LDTVNFSKEFNKGTPEDEEMIDLLERVLMIENPIDERQRVLDELTKAKSDVS- 247
L +T++ L + F++E N+ P D M+D R+L ++ I +LD+LT +
Sbjct: 211 LVATVLHLGNIQFTEEDNQAVPVDVSMLDAPSRLLSVDKDI-----LLDKLTSYSMETRW 265
Query: 248 ----KLTASQLLRKDVKIVEDVLIPSFPMLVEEFL 278
++T L + I D L + + E+L
Sbjct: 266 GGKVEVTKKTLNKDQAVIARDALAKAIFFQLFEYL 300
>SB_3124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/76 (21%), Positives = 37/76 (48%)
Query: 180 FKDHMPCSQMLYSTIILDTVNFSKEFNKGTPEDEEMIDLLERVLMIENPIDERQRVLDEL 239
FK M Q+ ++LD ++ +E D+ ++D + + + I Q +LD++
Sbjct: 482 FKPSMLPDQISTDQVLLDQISNERELLDQISNDQVLLDQISNDQALLDQISNDQALLDQI 541
Query: 240 TKAKSDVSKLTASQLL 255
T + + +++ Q+L
Sbjct: 542 TNDQVLLDQISNDQVL 557
>SB_53736| Best HMM Match : Borrelia_orfA (HMM E-Value=0.64)
Length = 520
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 218 LLERVLMIENPIDERQRVLDELTKAKSDVSK-LTASQLLRKDVKIVEDVLIPSFPMLVEE 276
L +R M ++ + E+Q DEL K K L A+Q++ + ED L ++VE
Sbjct: 130 LAKRQAMAQHRVMEKQEEKDELDNRKMKALKNLEANQMISEGTMTAEDFLEAYHRLVVEH 189
Query: 277 FLRLDDAVD 285
L ++ D
Sbjct: 190 QLAKEEQED 198
>SB_30499| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 29.5 bits (63), Expect = 4.0
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 159 ATLVTRRIKEMCLLLGKEFQFFKDHMPCSQMLYSTIILDTVNFSKEFNK--GTPEDEEMI 216
A L + RIKE CLL F+ +P S+ +Y + L F E K T E+
Sbjct: 234 AGLDSNRIKE-CLLSFMVFEA-SQRVPISECVYGLVDLPFNVFVTEVLKLSDTEYIEKPT 291
Query: 217 DLLERVL--MIENPIDERQRVLDELTKAKSDVSKLTASQLLRKDV 259
++L M NPID++ V + + ++S+ T + ++ D+
Sbjct: 292 KTFGKLLIAMSHNPIDKKLTVRVDSARGLPEMSRRTTNAYIKVDI 336
>SB_17069| Best HMM Match : Transposase_8 (HMM E-Value=7.7)
Length = 733
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 20 LDSAVCSIVYALYLNWQHNQIKCKVCTKDKRGASSKDDIFIPILNMVRQDFALKTEVMYL 79
+D + CSI++ L W N K C G + F+ L+ QDF L M L
Sbjct: 188 VDGSDCSILHYLS-EWMRNFWKTHECYAKDHGVNGTICSFLVYLSEFLQDFLLPIREMML 246
Query: 80 F 80
F
Sbjct: 247 F 247
>SB_18760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1569
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 196 LDTVNFSKEFNKGTPEDEEMIDLLERVLMIENPIDERQRVLDELTKAKSDVSKLT 250
LDT++ S + K +D+E + L+ + + +R++ KAK+ K T
Sbjct: 668 LDTISKSLQVRKEAAKDQEAFEGLQEMFATPGQVQQRRKSSRSANKAKAATPKAT 722
>SB_22035| Best HMM Match : LPP (HMM E-Value=4.9e-10)
Length = 270
Score = 28.7 bits (61), Expect = 6.9
Identities = 14/78 (17%), Positives = 39/78 (50%)
Query: 178 QFFKDHMPCSQMLYSTIILDTVNFSKEFNKGTPEDEEMIDLLERVLMIENPIDERQRVLD 237
Q D + Q+ + ++LD ++ + D+E++D + ++ + I Q +LD
Sbjct: 5 QISNDQVLLDQISNNLVLLDQISTDQVLLDQISNDQELLDQISNDQVLLDQISNDQALLD 64
Query: 238 ELTKAKSDVSKLTASQLL 255
+++ + + +++ Q+L
Sbjct: 65 QISNDQVLLDQISNDQVL 82
>SB_17140| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1236
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 91 IFRNDYDLCSLLRDSKCNVVLVDHHVLAANDVFL 124
+ RN DL +LLR KC V LV + L D+FL
Sbjct: 1183 LLRNCEDLVNLLR--KCQVRLVQNDELLPTDIFL 1214
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.138 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,481,706
Number of Sequences: 59808
Number of extensions: 428029
Number of successful extensions: 958
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 946
Number of HSP's gapped (non-prelim): 16
length of query: 329
length of database: 16,821,457
effective HSP length: 82
effective length of query: 247
effective length of database: 11,917,201
effective search space: 2943548647
effective search space used: 2943548647
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
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