Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001773-TA|BGIBMGA001773-PA|IPR004097|DHHA2
(329 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006603-7|ABB51201.1| 576|Caenorhabditis elegans Hypothetical ... 30 2.0
AF036692-4|AAS47682.1| 318|Caenorhabditis elegans Serpentine re... 29 3.4
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 29 4.5
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 29 4.5
AF016418-10|AAK18896.1| 611|Caenorhabditis elegans Hypothetical... 29 4.5
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 29 6.0
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 29 6.0
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 6.0
Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z81467-5|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z79759-1|CAB02138.2| 841|Caenorhabditis elegans Hypothetical pr... 28 7.9
U40800-3|AAA81490.1| 467|Caenorhabditis elegans Squashed vulva ... 28 7.9
AY147933-1|AAN39843.1| 467|Caenorhabditis elegans UDP-glucuroni... 28 7.9
>AC006603-7|ABB51201.1| 576|Caenorhabditis elegans Hypothetical
protein B0524.7 protein.
Length = 576
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 211 EDEEMIDLLERVLMIEN----PIDERQRVLDELTKAKSDVSKLTASQLLRKDVKIVEDV 265
E EEMID+++R IEN + R + L + ++ S + LLRK K++E++
Sbjct: 275 ELEEMIDVIKREFSIENLMMRMLKNRHLLTMRLVVSGTNQSSIDRENLLRKTKKLLEEL 333
>AF036692-4|AAS47682.1| 318|Caenorhabditis elegans Serpentine
receptor, class x protein14 protein.
Length = 318
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 147 DTRLIIEIVGSCATLVTRRIKEMCLLLGKEFQFF 180
D L++ +VG+CAT + +K L KEF+ F
Sbjct: 208 DLLLVVTVVGNCATWIFAVVKRKNLRNPKEFRLF 241
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 159 ATLVTRRIKEMCLLLGKEFQFFKDHMPCSQMLYSTIILDTVNFSKEFNKGTPEDEEMIDL 218
+ +V + I E ++ + F + +DH PC + +D + + F++GT D E+
Sbjct: 210 SAIVDKYIGESARMIREMFNYARDHQPCIVFMDE---IDAIG-GRRFSEGTSADREIQRT 265
Query: 219 LERVL 223
L +L
Sbjct: 266 LMELL 270
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 159 ATLVTRRIKEMCLLLGKEFQFFKDHMPCSQMLYSTIILDTVNFSKEFNKGTPEDEEMIDL 218
+ +V + I E ++ + F + +DH PC + +D + + F++GT D E+
Sbjct: 218 SAIVDKYIGESARMIREMFNYARDHQPCIVFMDE---IDAIG-GRRFSEGTSADREIQRT 273
Query: 219 LERVL 223
L +L
Sbjct: 274 LMELL 278
>AF016418-10|AAK18896.1| 611|Caenorhabditis elegans Hypothetical
protein C49G7.1 protein.
Length = 611
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 204 EFNKGTPEDEEMIDLLERVLMIENPIDERQRVLDELTKAKSDVSKLTA 251
EFNK E E+ D+ VL I + + ELT+ D + TA
Sbjct: 108 EFNKSLEEMSEIFDIASSVLGIAGSRSDLEHFQKELTRISDDEAAKTA 155
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 213 EEMIDLLERVLMIENPIDERQRVLDELTKAKSDVSKLT--ASQLLRKDVKIVEDVLIP 268
E+++D +L+I+ I+ ++EL+K + VSKL + +L +DV I + +P
Sbjct: 111 EDLMDSFNELLIIKTKIESGGIPIEELSKLRLRVSKLVDRGNTILGQDVVIRNEEGVP 168
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 213 EEMIDLLERVLMIENPIDERQRVLDELTKAKSDVSKLT--ASQLLRKDVKIVEDVLIP 268
E+++D +L+I+ I+ ++EL+K + VSKL + +L +DV I + +P
Sbjct: 111 EDLMDSFNELLIIKTKIESGGIPIEELSKLRLRVSKLVDRGNTILGQDVVIRNEEGVP 168
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 213 EEMIDLLERVLMIENPIDERQRVLDELTKAKSDVSKLT--ASQLLRKDVKIVEDVLIP 268
E+++D +L+I+ I+ ++EL+K + VSKL + +L +DV I + +P
Sbjct: 111 EDLMDSFNELLIIKTKIESGGIPIEELSKLRLRVSKLVDRGNTILGQDVVIRNEEGVP 168
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 195 ILDTVNFSKEFNKGTPEDEEMIDLLERVLMIENPIDERQRVLDELTKAKSDVSKL 249
+LDTV+ K E E DLL R+ + + ++ L++ KAK+D L
Sbjct: 3498 LLDTVSGVKPDELDDKERAEYNDLLARLATAADVLKNKRAELEQAVKAKADEKSL 3552
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 195 ILDTVNFSKEFNKGTPEDEEMIDLLERVLMIENPIDERQRVLDELTKAKSDVSKL 249
+LDTV+ K E E DLL R+ + + ++ L++ KAK+D L
Sbjct: 4452 LLDTVSGVKPDELDDKERAEYNDLLARLATAADVLKNKRAELEQAVKAKADEKSL 4506
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 195 ILDTVNFSKEFNKGTPEDEEMIDLLERVLMIENPIDERQRVLDELTKAKSDVSKL 249
+LDTV+ K E E DLL R+ + + ++ L++ KAK+D L
Sbjct: 5355 LLDTVSGVKPDELDDKERAEYNDLLARLATAADVLKNKRAELEQAVKAKADEKSL 5409
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 195 ILDTVNFSKEFNKGTPEDEEMIDLLERVLMIENPIDERQRVLDELTKAKSDVSKL 249
+LDTV+ K E E DLL R+ + + ++ L++ KAK+D L
Sbjct: 6258 LLDTVSGVKPDELDDKERAEYNDLLARLATAADVLKNKRAELEQAVKAKADEKSL 6312
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 195 ILDTVNFSKEFNKGTPEDEEMIDLLERVLMIENPIDERQRVLDELTKAKSDVSKL 249
+LDTV+ K E E DLL R+ + + ++ L++ KAK+D L
Sbjct: 7161 LLDTVSGVKPDELDDKERAEYNDLLARLATAADVLKNKRAELEQAVKAKADEKSL 7215
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 195 ILDTVNFSKEFNKGTPEDEEMIDLLERVLMIENPIDERQRVLDELTKAKSDVSKL 249
+LDTV+ K E E DLL R+ + + ++ L++ KAK+D L
Sbjct: 8064 LLDTVSGVKPDELDDKERAEYNDLLARLATAADVLKNKRAELEQAVKAKADEKSL 8118
>Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical protein
F26H9.8 protein.
Length = 1377
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 208 GTPEDEEMIDLLERVLMIENPIDERQRVLDELTKAKSDVSKLTAS 252
G+ E + IDL L E ++ +R++ E T+ S++SK+ S
Sbjct: 1318 GSKEKAKTIDLCNNPLTKEPKLNSAKRIIKEWTEYDSEISKVLNS 1362
>Z81467-5|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical protein
F26H9.8 protein.
Length = 1377
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 208 GTPEDEEMIDLLERVLMIENPIDERQRVLDELTKAKSDVSKLTAS 252
G+ E + IDL L E ++ +R++ E T+ S++SK+ S
Sbjct: 1318 GSKEKAKTIDLCNNPLTKEPKLNSAKRIIKEWTEYDSEISKVLNS 1362
>Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical
protein W05B2.4 protein.
Length = 2265
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 211 EDEEMIDLLERVLMIENPIDERQ-RVLDELTK 241
E EE++D ER +IEN D Q RV DEL +
Sbjct: 134 ELEELMDCAERYALIENVADGYQKRVKDELAR 165
>Z79759-1|CAB02138.2| 841|Caenorhabditis elegans Hypothetical
protein ZK858.1 protein.
Length = 841
Score = 28.3 bits (60), Expect = 7.9
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 190 LYSTIILDTVNFSK-EFNKGTPEDEEMIDLLERVLMIENPIDERQRVLDEL-------TK 241
L++T++ V+ S+ + + P E D R L I NP D+RQ + +L T+
Sbjct: 397 LHNTLVSPMVDLSRYAWLRKAPAKAEKRD--SRPLTIVNPADDRQTLAQQLKKQILEQTE 454
Query: 242 AKSDVSKLTASQLLRKDVKIV 262
AK + K+ A +K+ ++V
Sbjct: 455 AKKSLEKMPACDDNKKEEELV 475
>U40800-3|AAA81490.1| 467|Caenorhabditis elegans Squashed vulva
protein 1 protein.
Length = 467
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 204 EFNKGTPEDEEMIDLLERVLMIENPIDERQRVLDE 238
EFNK D+ + LLER+ ++E+ + + +D+
Sbjct: 67 EFNKNNIPDDTVSSLLERIKLLEDELSSMRTRMDD 101
>AY147933-1|AAN39843.1| 467|Caenorhabditis elegans UDP-glucuronic
acid decarboxylase protein.
Length = 467
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 204 EFNKGTPEDEEMIDLLERVLMIENPIDERQRVLDE 238
EFNK D+ + LLER+ ++E+ + + +D+
Sbjct: 67 EFNKNNIPDDTVSSLLERIKLLEDELSSMRTRMDD 101
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.138 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,049,278
Number of Sequences: 27539
Number of extensions: 341437
Number of successful extensions: 987
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 963
Number of HSP's gapped (non-prelim): 32
length of query: 329
length of database: 12,573,161
effective HSP length: 82
effective length of query: 247
effective length of database: 10,314,963
effective search space: 2547795861
effective search space used: 2547795861
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
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