GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001772-TA|BGIBMGA001772-PA|undefined
         (633 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   6.1  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   6.1  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 6.1
 Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 5/63 (7%)

Query: 317 QISAEPQQQKSELRIPEPIPMPPAACQATITPTSNGMYTIRNPLMSMMHQQRAPHPRPDQ 376
           Q+   P  Q    + P P   PPA+   +IT   +  +       +   QQ+ PHP+   
Sbjct: 102 QLPHHPHHQHHPQQQPSPQTSPPASISFSITNILSDRFG-----KATAEQQQQPHPQSPA 156

Query: 377 LHD 379
           + +
Sbjct: 157 IRE 159


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 25.0 bits (52), Expect = 6.1
 Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 5/63 (7%)

Query: 317 QISAEPQQQKSELRIPEPIPMPPAACQATITPTSNGMYTIRNPLMSMMHQQRAPHPRPDQ 376
           Q+   P  Q    + P P   PPA+   +IT   +  +       +   QQ+ PHP+   
Sbjct: 102 QLPHHPHHQHHPQQQPSPQTSPPASISFSITNILSDRFG-----KATAEQQQQPHPQSPA 156

Query: 377 LHD 379
           + +
Sbjct: 157 IRE 159


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.312    0.129    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,880
Number of Sequences: 2123
Number of extensions: 21297
Number of successful extensions: 26
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 2
length of query: 633
length of database: 516,269
effective HSP length: 68
effective length of query: 565
effective length of database: 371,905
effective search space: 210126325
effective search space used: 210126325
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 51 (24.6 bits)