Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001771-TA|BGIBMGA001771-PA|undefined
(282 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0606 + 24297392-24299241,24299424-24299484,24299626-24300087 30 1.8
09_06_0310 - 22212348-22212695,22213561-22213766,22213796-222139... 30 2.4
06_01_0888 + 6805071-6805485,6806202-6806374,6806501-6806549,680... 30 2.4
02_05_0819 - 32014236-32016059 30 2.4
01_01_0047 + 334809-334877,334966-335074,335159-335299,336337-33... 29 3.2
05_05_0347 - 24267184-24267400,24268316-24268665 29 5.6
03_01_0096 + 763850-764027,764873-765189,765262-765433,765513-76... 28 7.4
12_02_0769 + 23001558-23001995 28 9.7
10_01_0323 + 3530246-3530446,3531091-3531726,3531860-3532018,353... 28 9.7
02_05_1308 + 35601314-35601390,35602486-35602566,35603513-356040... 28 9.7
>02_04_0606 + 24297392-24299241,24299424-24299484,24299626-24300087
Length = 790
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 46 RRKGKKQKINPAHQAKMQLVTEKIGELTTVMNTTAKELRVAEKKMSEYSLKLEQCERQLA 105
RR + PA AK++ V ++ L + EL+ + K ++ + KL +RQL+
Sbjct: 232 RRAAAAEHETPAAAAKLRAVEDENKALKQTLAKRDAELQFVQMKYADEACKLSVLQRQLS 291
Query: 106 EV 107
E+
Sbjct: 292 EL 293
>09_06_0310 -
22212348-22212695,22213561-22213766,22213796-22213905,
22214351-22214427,22214466-22214486,22214518-22215651
Length = 631
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 28 AAEHVRDARRALQHYHSVRRKGKKQKINPAHQAKMQLVTE-KIGELTTVMNTTA-----K 81
AAE +A +A++ + ++++ A QA ++L + K E T A K
Sbjct: 498 AAEEEAEAGKAIEQEFETQLSSLNKELDEAKQAMLELENKLKFKEETAAAAMAARDAAEK 557
Query: 82 ELRVAEKKMSEYSLKLEQCERQLAE 106
L++A+ + + +LE+ RQL E
Sbjct: 558 SLKLADMRSTRLRERLEEINRQLEE 582
>06_01_0888 +
6805071-6805485,6806202-6806374,6806501-6806549,
6806654-6806820,6806919-6807002,6807097-6807135
Length = 308
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 69 IGELTTVMNTTAKELRVAEKKMSEYSLKLEQCERQLAEV--RALAPPQPQDEET 120
+ +T++ + + E+K E K E+ ER+ AE +A AP +P+ E +
Sbjct: 68 VSRVTSMASAARAVVEAEERKAREAKRKAEEAERKAAEAERKAKAPAEPKPESS 121
>02_05_0819 - 32014236-32016059
Length = 607
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/86 (20%), Positives = 39/86 (45%)
Query: 30 EHVRDARRALQHYHSVRRKGKKQKINPAHQAKMQLVTEKIGELTTVMNTTAKELRVAEKK 89
E + AL+ +VR + K P H ++ + + K + + N+ AKE + +
Sbjct: 158 ETTERTKAALEKVVNVRLSAAQPKNVPTHDSESKFIKYKPSQQSAAFNSGAKERIIRMSE 217
Query: 90 MSEYSLKLEQCERQLAEVRALAPPQP 115
M++ L+ + + + + +PP P
Sbjct: 218 MAQDPLEPPKFKHKRVPRASGSPPVP 243
>01_01_0047 + 334809-334877,334966-335074,335159-335299,336337-336498,
336577-336734,337180-337310,337385-337472,337587-337690,
338346-338444,339060-339116,339262-339337,339519-339602,
339969-340010,340128-340198,341516-341564,342370-342441,
343149-343286,343393-343473,344166-344353,344591-345188,
345274-345342,346729-346854,347048-347175,347986-348142,
348342-348388,348472-348535,348691-348765,349292-349414,
349797-349982,351179-351303,351390-351459,351974-352101,
352585-352726,353065-353163,353239-353285,353598-353652,
353758-353967,354686-354757,354836-354905,355231-355414,
355521-355644,355732-355863,356252-356317,356805-356852,
357572-357676,357728-357865,358097-358399,358482-358594,
359082-359148,359236-359310,359395-359517,359610-359618,
360156-360320,360401-360502,361545-361696,361794-361995,
362079-362126,362215-362298,362613-362657,363302-363385,
363890-363970,364044-364133,364217-364279,364824-364841,
365238-365378,365494-365550,366091-366185,366275-366383,
367067-367156,367308-367387,367480-367558,367742-367903,
368005-368136,368335-368469,368553-368618,369317-369457,
369575-369648,369685-369910
Length = 2905
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 39 LQHYHSVRRKGKKQKINPAH-QAKMQLVTEKIGELTTVMNTTAKELRVAEK-KMSEYSLK 96
L HY K +++++ QA ++L K EL T+M K L+ + K + ++YS+K
Sbjct: 2176 LAHYTDGLFKSYEERLSSNEWQAALRLRKYKSKELDTLM----KRLKSSSKSEKTDYSVK 2231
Query: 97 LEQCERQLA 105
+++ ++QLA
Sbjct: 2232 IQELQKQLA 2240
>05_05_0347 - 24267184-24267400,24268316-24268665
Length = 188
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 25 LATAAEHVRDARRALQHYHSVRRKGKKQKINPAHQAKMQLVTEKIGELTTVMNTTAKE 82
L TAA+ + R + +H RR KK+K P MQL G + + TTA +
Sbjct: 36 LETAADEIGGVRCGVLCFHLPRRSKKKKKKKPPPPV-MQLAGGAAGIKSVQLETTATD 92
>03_01_0096 +
763850-764027,764873-765189,765262-765433,765513-765586,
765658-765835,765917-766026,766122-766221,766305-766391,
766505-766681,766847-767120,767201-767362,767450-767665,
767744-767781,768044-768102,768214-768339,768415-768540,
768642-768695,768789-768851,768924-768986,769079-769141,
769232-769732
Length = 1045
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 58 HQAKMQLVTE-KIGELTTVMNTTAKELRVAEKKMSEYSLKLEQCE--RQLAEVRAL 110
H+ ++Q +E +I EL + VAE K+ E LKL++ E R +AE +A+
Sbjct: 805 HKLRLQQQSESEIKELELKLKEQEHHRSVAESKIKELELKLKEQEHHRSVAESKAM 860
>12_02_0769 + 23001558-23001995
Length = 145
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 16 GERDGLSVSLATAAEHVRDARRALQHYHSVRRK--GKKQKINPAHQAKMQLVTEKIGELT 73
G DG S + AA+H R+ RR L + S RR K+Q ++ Q +L + L
Sbjct: 10 GSSDGDSAGVVVAADHRREKRR-LSNRESARRSRLRKQQHLDELVQEVARLQADNARVLA 68
Query: 74 TVMNTTAKELRVAEK 88
+ RV ++
Sbjct: 69 RASEIAGQYARVEQE 83
>10_01_0323 +
3530246-3530446,3531091-3531726,3531860-3532018,
3532276-3532569,3557747-3557941,3558875-3559095,
3559190-3559373,3559797-3559973,3561319-3561824,
3561880-3562060
Length = 917
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 163 YESVLPESVPAIEELYRRLKDKQXXXXXXXXXXXXXXRRS--PGDGAVTLT--VPASHSA 218
Y+ ES IE +R + DKQ RRS P D A ++ V A HSA
Sbjct: 393 YDRQAKESAMEIERQFRLVVDKQHMLCQSVIDALQANRRSPIPTDSAPIISDEVSAQHSA 452
Query: 219 P 219
P
Sbjct: 453 P 453
>02_05_1308 +
35601314-35601390,35602486-35602566,35603513-35604064,
35604998-35605408,35606830-35607544
Length = 611
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 21 LSVSLATAAEHVRDARRALQHYHSVRRKGKKQKINPAHQAKMQLVTEKIGEL 72
L LA + ++DARR L H+ + K Q++ P H ++ ++++ E+
Sbjct: 192 LVADLAASEASLQDARRGLFHHDGEAWRLKIQRLLPPHGITVKHISDRDTEI 243
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.123 0.335
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,100,081
Number of Sequences: 37544
Number of extensions: 179869
Number of successful extensions: 466
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 462
Number of HSP's gapped (non-prelim): 11
length of query: 282
length of database: 14,793,348
effective HSP length: 81
effective length of query: 201
effective length of database: 11,752,284
effective search space: 2362209084
effective search space used: 2362209084
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 59 (27.9 bits)
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