GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001771-TA|BGIBMGA001771-PA|undefined
         (282 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    30   0.085
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    28   0.26 
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    24   4.2  
AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.         23   7.4  
AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.    23   9.8  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 29.9 bits (64), Expect = 0.085
 Identities = 15/40 (37%), Positives = 24/40 (60%)

Query: 70  GELTTVMNTTAKELRVAEKKMSEYSLKLEQCERQLAEVRA 109
           G LT     T++     +KK SEYS  +++ E++LA+ RA
Sbjct: 663 GSLTGGYFNTSRSRLEMQKKRSEYSQLIQEHEKELADFRA 702


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 28.3 bits (60), Expect = 0.26
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 11/75 (14%)

Query: 43  HSVRRKGKKQKINPAHQAKMQLVTEKIGELTTV----------MNTTAKELRVAEKKMSE 92
           H  + K +K+KI    +  M+  T + GELTTV          +  +  +L  ++K ++E
Sbjct: 683 HMAQLKLQKEKITEELKEVMKK-TRRQGELTTVESQIRGLENRLKYSMNDLETSKKNINE 741

Query: 93  YSLKLEQCERQLAEV 107
           Y  +LE   R+L ++
Sbjct: 742 YDRQLEDFTRELDQI 756


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 11/40 (27%), Positives = 22/40 (55%)

Query: 144 MSEKQKQNDAYISELISLNYESVLPESVPAIEELYRRLKD 183
           MS   K     + E+++ + ES+L + V ++ E+Y   +D
Sbjct: 1   MSTSLKNMPYELLEILTTDNESILSDGVESLTEMYGPKRD 40


>AF469165-1|AAL68692.1|  226|Anopheles gambiae amylase protein.
          Length = 226

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 10/14 (71%), Positives = 11/14 (78%)

Query: 204 GDGAVTLTVPASHS 217
           GDG V+LTVP S S
Sbjct: 203 GDGRVSLTVPRSSS 216


>AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 4   QARLHFAYSYTCGERDGLSVSLATAAE 30
           +A  + ++SY C + D  S+    AAE
Sbjct: 97  EASFYASFSYNCHDHDQYSMECLEAAE 123


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.311    0.123    0.335 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,008
Number of Sequences: 2123
Number of extensions: 5375
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 5
length of query: 282
length of database: 516,269
effective HSP length: 63
effective length of query: 219
effective length of database: 382,520
effective search space: 83771880
effective search space used: 83771880
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 47 (23.0 bits)