Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001770-TA|BGIBMGA001770-PA|undefined
(1503 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit Ssr1|Schizosa... 36 0.033
SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr ... 32 0.53
SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces po... 32 0.70
SPAC6G10.07 |||nuclear cap-binding complex large subunit |Schizo... 31 0.93
SPAC19G12.02c |pms1||MutL family mismatch-repair protein Pms1|Sc... 31 0.93
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 31 1.2
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 31 1.6
SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces pomb... 30 2.1
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 2.1
SPAC806.08c |mod21||gamma tubulin complex subunit Mod21|Schizosa... 30 2.8
SPAC17C9.08 |pnu1|nuc1, end1|endodeoxyribonuclease Pnu1|Schizosa... 29 4.9
SPCC4G3.17 |||HD domain|Schizosaccharomyces pombe|chr 3|||Manual 29 4.9
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 29 6.5
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 28 8.6
SPBP4H10.21c |sld5||GINS complex subunit Sld5|Schizosaccharomyce... 28 8.6
SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|... 28 8.6
>SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit
Ssr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 36.3 bits (80), Expect = 0.033
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 397 KDMKECLAKFANFALNDKEAEVKFPDSVSPPLQEPSPTSAGPMPVFSKSTQRLLPVNKFL 456
K ++EC+ KF N +DK A K + P+ + S P+ +++P + F
Sbjct: 322 KSVEECILKFLNLPSSDK-ALFKMDKVHTNPVVD-SLQGKNPILSVVSFLAKMVPPSSFT 379
Query: 457 QKNEIKEDVANE-SAADVKPPPTAQDVDV-AQAEPKQDADKGERKY 500
QK+ KE+ +++ V P P ++ DV + +D+D Y
Sbjct: 380 QKSSAKEEESDKVKGESVYPKPESESYDVEMNGKSLEDSDSLSELY 425
>SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 774
Score = 32.3 bits (70), Expect = 0.53
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 352 RAMELKNDDDKATKPGAEPPDACPLEREENTDTETVVGE---KETELCKDMKECLAKFAN 408
+ +L + +++AT P P D E E +TDT VV E K E +EC A F +
Sbjct: 63 KLQQLFDSENQATAPEKLPKDVIIPEEEYHTDTFNVVKESNDKPKENLVTSEECKASFFS 122
Query: 409 FALNDKEAEVKFPDSVSPPL 428
+K++ + + PL
Sbjct: 123 TDSVNKDSTIDYDALQKDPL 142
>SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 31.9 bits (69), Expect = 0.70
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 3/143 (2%)
Query: 350 SPRAMELKNDDDKATKPGAEPPDACPLEREENTDTETVVGEKETELCKDMKECLAKFANF 409
+PR L D +A K ++ + P+ N TE + + + KD+K+C K +F
Sbjct: 137 APRGHCLSEFDLEAMKRFSKRVNVIPVIGNSNAFTEEELKNFKDVIMKDLKQCNIKVFDF 196
Query: 410 ALNDKEAEVK-FPDSVSPPLQEPSPTSAGPMPVFSKSTQRLLPVNKFLQKNEIKEDVANE 468
+ +E E + D+ P S G + QR+ V KF + +D A+
Sbjct: 197 PWDPEEDEDEVIEDNKRLWESVPFAVSGGVSEEDEEGYQRI--VKKFQWGTFVIDDPAHS 254
Query: 469 SAADVKPPPTAQDVDVAQAEPKQ 491
++K +D+ ++ KQ
Sbjct: 255 DFLNLKTVLFISHLDILKSITKQ 277
>SPAC6G10.07 |||nuclear cap-binding complex large subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 780
Score = 31.5 bits (68), Expect = 0.93
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 922 AEKPDSNPELKNQTNKKKRQYFLQRLKALNRAYMESLPKESITSEEWLVML--YMLDNFE 979
+ K DS+ L N+ N++K L AL E+ E+I WL ++ Y+ NF
Sbjct: 673 SNKEDSS--LINEANEEKEIVTNLLLSALRALISENA--ENIWVSHWLNLMLKYVESNFL 728
Query: 980 EKMKDSFTKINPPTKPSQSNEAE 1002
KD+ + N P + + S E E
Sbjct: 729 SVKKDTIEEANEPVQENTSEEQE 751
>SPAC19G12.02c |pms1||MutL family mismatch-repair protein
Pms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 794
Score = 31.5 bits (68), Expect = 0.93
Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 2/113 (1%)
Query: 388 VGEKETELCKDMKECLAKFANFALNDKEAEVKFPDSVSPPLQEPSPTSAGPMPVFSKSTQ 447
+ EK T + MK+ LA FA+ + + + P+ +PS + + +
Sbjct: 434 LNEKVTASSERMKKKLALFASSTDTSMQKTIDSSFPLKQPINKPSSNPNNLL--LNDPSP 491
Query: 448 RLLPVNKFLQKNEIKEDVANESAADVKPPPTAQDVDVAQAEPKQDADKGERKY 500
PV K + NEI+ ES + + P + VA P + A + K+
Sbjct: 492 ASTPVAKTINLNEIESVHNAESVSTLSSIPRTEQTSVANRIPSKTAALQKLKF 544
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 423 SVSPPLQEPSPTSAGPMPVFSKSTQRLLPVNKFLQKNEIKEDVANESAADVKPPPTAQDV 482
S++P P+ TS P+P ++ + PVN+ K++ V+N + + P +A +
Sbjct: 360 SLTPLSSRPAHTSLPPIPTVQTTSSNVPPVNRPSLKSK-SPSVSNILSNQLSPISSANND 418
Query: 483 DVAQAEPK 490
+A+ +PK
Sbjct: 419 VMARLQPK 426
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 30.7 bits (66), Expect = 1.6
Identities = 37/162 (22%), Positives = 57/162 (35%), Gaps = 6/162 (3%)
Query: 330 KPISPSITKPNKILHMLKHKSPRAMELKNDDDKATKPGA-EPPDACPLEREENTDTETVV 388
K +PS TKP + SP+ K++ K +KP A E R E+ +
Sbjct: 169 KESAPSSTKPAPDAKEPEFSSPKPKPAKSEPVKQSKPKATETARPSSFSRNEDRVKMNRM 228
Query: 389 GEKETELCKDMKECLAKFANFALNDKEAEVKFPDSVSPPLQEPSPTSAGPMPVFSKSTQR 448
+ E K+ + A F D A V + + + G M FSK+ +
Sbjct: 229 RLRIAERLKESQNRAASLTTFNECDMSAVVALRKKYKDEILKETGVKIGFMSFFSKACTQ 288
Query: 449 LLPVNKFLQKNEIKEDVANESAADVKPPPTAQDVDVAQAEPK 490
+ Q I + E D D+ +A A PK
Sbjct: 289 AMK-----QIPAINGSIEGEGKGDTLVYRDFCDLSIAVATPK 325
>SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 990
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 860 NTFDLLIMKLSKMAEKDFAVKSLKFKYLDVVKRCSESV-QLAAWIQNDPE 908
N D L L+++ E FA+K+ F+ ++K CS+ + + ++QN P+
Sbjct: 498 NDSDTLDAWLTRLFETSFAIKASAFQNPQLLKTCSQLLSSCSCFLQNHPQ 547
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.3 bits (65), Expect = 2.1
Identities = 52/245 (21%), Positives = 101/245 (41%), Gaps = 28/245 (11%)
Query: 758 ELMREMAKSRFNAWKQYAATKVKSIPV----SELLAHEIESVLDKFYGF-------IQDL 806
E +++ + +RF KQ K K + +E + EIES+ D + + +
Sbjct: 1422 ENLKKSSLTRFAHLKQELTNKNKELTSKNAENEAMQKEIESLKDSNHQLQESASSDAEQI 1481
Query: 807 TVKQCE---NDADKIVEKIDEYRRNAD--MDEDSDPDSCPASKESLKQITKLLSTSAGNT 861
T +Q E ++ ++ +++ + + + E D D K+I +L S G
Sbjct: 1482 TKEQFEQLKSEKERTEKELADSKNELEHLQSEAVDADGKTEISNLEKEIHELRSDKEGLV 1541
Query: 862 FDLLIMKLSKMAEKDFAVKSLKFKYLDVVKRCSESVQLAA-WIQNDPETAANIILDMSDL 920
+ + A ++ + + D + R ++ + + + ET I+ S+L
Sbjct: 1542 QQVQNLSAELAALREHSPTQGSLENADEIARLRSQLESTKQYYEKEKET--EILAARSEL 1599
Query: 921 KAEKPDSNPELKNQTNKKKRQYFLQRLKALNRAYMESLPKESITSEEWLVMLYMLDNFEE 980
AEK + EL+NQ N+K QR+K L E K S + + + EE
Sbjct: 1600 VAEKEKTKEELENQLNEKS-----QRIKELE----EQAQKNSSENTHDNIDDMIKQQVEE 1650
Query: 981 KMKDS 985
K+K++
Sbjct: 1651 KLKEN 1655
>SPAC806.08c |mod21||gamma tubulin complex subunit
Mod21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 618
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Query: 381 NTDTETVVGEKETELCKDMKECLAKF 406
+ D E+V+GEKE + K ++CL++F
Sbjct: 507 DVDDESVIGEKEKLILKQKQKCLSEF 532
>SPAC17C9.08 |pnu1|nuc1, end1|endodeoxyribonuclease
Pnu1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 1362 LTDKMAKITVDEQPVVRPKVNRRPFYRIYEALMVNPP-IAVNT 1403
LT K +T+ P+ PK N R + + ++ NPP +AV T
Sbjct: 188 LTSKYGSVTIMTGPLYLPKKNERGQWEVQYRVIGNPPNVAVPT 230
>SPCC4G3.17 |||HD domain|Schizosaccharomyces pombe|chr 3|||Manual
Length = 198
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 446 TQRLLPVNKFLQKNEIKEDVANESAADVKPPPTAQDVD----VAQAEPKQDADKGERKYG 501
TQ+L+P+N LQ EIKE +A +D+D +AQ + GE+
Sbjct: 102 TQQLIPLNLSLQAEEIKELFLEYESASTPEAKFVKDIDKFEMIAQMFEYERKFNGEKDLS 161
Query: 502 SF 503
F
Sbjct: 162 QF 163
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/92 (18%), Positives = 40/92 (43%)
Query: 455 FLQKNEIKEDVANESAADVKPPPTAQDVDVAQAEPKQDADKGERKYGSFGQEIKKAMEEC 514
+ +K I+ED+AN+ + ++ + K+D KY ++ M +
Sbjct: 922 YAEKQSIEEDLANKQTEISYLSDLSSTLEKKLSSIKKDEQTISSKYKELEKDYLNIMADY 981
Query: 515 QNIIDSYTGTESDPGNDNVSLEKMCEVMLRLN 546
Q+ + E N+++ ++ E ++RL+
Sbjct: 982 QHSSQHLSNLEKAINEKNLNIRELNEKLMRLD 1013
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 1388 RIYEALM-VNPPIAVNTEGKVNPNAMEQIRLQQLKQHAQHPPAQQSKPEPI 1437
R Y A M NP A N P + Q++ QQ QH Q Q S+P PI
Sbjct: 322 RTYPAGMGPNPTAARNGFYPPTPAQIHQLKAQQ--QHLQRQSKQMSEPAPI 370
>SPBP4H10.21c |sld5||GINS complex subunit Sld5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 214
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 919 DLKAEKPDSNPELKNQTNKKKRQYFLQRLKALNRAYMESLPKE 961
D A+ S+P L + +RQY L+ + ++R YM+S +E
Sbjct: 98 DKYAQYIQSHPNLLLYLSSPERQYLLRHQQIVHRHYMDSFLRE 140
>SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 618
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 153 DEWP-APPSRSDQEARKRVDLGLSEVDRKLMAMYRRLPEVHRRQLQV 198
D W + SR D+E R+R G +D+ + Y R P ++ +Q V
Sbjct: 305 DHWDHSEESRIDREVRRRCFWGCFTLDKLISLCYGRPPGLYLKQTDV 351
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.129 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,682,209
Number of Sequences: 5004
Number of extensions: 222297
Number of successful extensions: 644
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 636
Number of HSP's gapped (non-prelim): 18
length of query: 1503
length of database: 2,362,478
effective HSP length: 82
effective length of query: 1421
effective length of database: 1,952,150
effective search space: 2774005150
effective search space used: 2774005150
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 60 (28.3 bits)
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