GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001770-TA|BGIBMGA001770-PA|undefined
         (1503 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    31   0.17 
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    29   1.2  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        29   1.2  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    27   2.8  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    27   3.7  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 31.5 bits (68), Expect = 0.17
 Identities = 16/73 (21%), Positives = 36/73 (49%)

Query: 448  RLLPVNKFLQKNEIKEDVANESAADVKPPPTAQDVDVAQAEPKQDADKGERKYGSFGQEI 507
            +L  +N+ LQ  + K  V ++S    K     + +D+   + K  +  GE+      +E+
Sbjct: 1050 KLAELNQILQDIQSKPIVIDDSEFAGKLHAVQEKIDILVEDAKSGSGVGEKTLNEILREL 1109

Query: 508  KKAMEECQNIIDS 520
            +  ++E Q ++D+
Sbjct: 1110 EARLQEVQKLLDN 1122


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 5/73 (6%)

Query: 813 NDADKIVEKIDEYRRNADMDEDSDPDSCP---ASKESLKQITKLLSTSAGNTFDLLIMKL 869
           +DA+K+ +++    RNAD D +S  ++ P   A ++ L+Q  +LL  S   + +L     
Sbjct: 41  SDAEKLEQRLLAPNRNADFDNESSEETQPPNDAGRDRLQQ--QLLQKSRLKSSNLKSTTY 98

Query: 870 SKMAEKDFAVKSL 882
           ++  E D   + L
Sbjct: 99  TRNTENDKLTRHL 111


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 18/76 (23%), Positives = 30/76 (39%)

Query: 737 EMPAEATVPFGNSVKEALSMDELMREMAKSRFNAWKQYAATKVKSIPVSELLAHEIESVL 796
           E+ AE +VP+       L+  + M+     R      +        P  E+L HE+  +L
Sbjct: 206 ELVAEQSVPYNYDGWVELNATQAMQRWVVERVANKGIFVEVYYAESPRKEILPHEVGLIL 265

Query: 797 DKFYGFIQDLTVKQCE 812
              +G  Q   V  C+
Sbjct: 266 SNRFGRYQPFLVGYCK 281


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 19/115 (16%), Positives = 50/115 (43%), Gaps = 2/115 (1%)

Query: 845 ESLKQITKLLSTSAG--NTFDLLIMKLSKMAEKDFAVKSLKFKYLDVVKRCSESVQLAAW 902
           E +  +  L+   A   +  +L  + +++  + +  +   + KY   ++RC E  +   +
Sbjct: 8   EEMSMVQLLIQPEAAYQSVAELGELGIAQFRDLNTDINMFQRKYTSEIRRCEEMERKIGY 67

Query: 903 IQNDPETAANIILDMSDLKAEKPDSNPELKNQTNKKKRQYFLQRLKALNRAYMES 957
           I+ +    +  I DM ++    P+S   +  +   +K +  +  L   N A +++
Sbjct: 68  IRREIVKDSVAIPDMPEVIPRTPNSREIIDLEAQLEKTENEIVELSENNNALLQN 122


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 27.1 bits (57), Expect = 3.7
 Identities = 9/39 (23%), Positives = 24/39 (61%)

Query: 254 EYHLQRFKEVRRKVMHMRDQQLYYHRLRMWLEDQLKQEK 292
           E+H  R+  +RRK    ++ QL   ++++W +++  +++
Sbjct: 233 EFHYTRYITIRRKAELAQNLQLSERQVKIWFQNRRAKDR 271


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.129    0.368 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,248,115
Number of Sequences: 2123
Number of extensions: 45367
Number of successful extensions: 82
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 77
Number of HSP's gapped (non-prelim): 6
length of query: 1503
length of database: 516,269
effective HSP length: 73
effective length of query: 1430
effective length of database: 361,290
effective search space: 516644700
effective search space used: 516644700
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 54 (25.8 bits)