GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001770-TA|BGIBMGA001770-PA|undefined
         (1503 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    25   6.1  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   6.1  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 6.1
 Identities = 14/52 (26%), Positives = 25/52 (48%)

Query: 962  SITSEEWLVMLYMLDNFEEKMKDSFTKINPPTKPSQSNEAEIVAARGLSKII 1013
            + ++EE +V L   +N  +K+   +   N   K   +NE   V+A G   +I
Sbjct: 507  NFSNEEQIVDLKAFNNVPKKLNMFYNNFNSDIKSISNNEQVKVSALGFFILI 558


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 6.1
 Identities = 14/52 (26%), Positives = 25/52 (48%)

Query: 962  SITSEEWLVMLYMLDNFEEKMKDSFTKINPPTKPSQSNEAEIVAARGLSKII 1013
            + ++EE +V L   +N  +K+   +   N   K   +NE   V+A G   +I
Sbjct: 507  NFSNEEQIVDLKAFNNVPKKLNMFYNNFNSDIKSISNNEQVKVSALGFFILI 558


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.129    0.368 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 351,961
Number of Sequences: 429
Number of extensions: 12748
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 4
length of query: 1503
length of database: 140,377
effective HSP length: 67
effective length of query: 1436
effective length of database: 111,634
effective search space: 160306424
effective search space used: 160306424
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 50 (24.2 bits)