Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001770-TA|BGIBMGA001770-PA|undefined
(1503 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g03790.1 68414.m00360 zinc finger (CCCH-type) family protein ... 40 0.013
At1g63730.1 68414.m07212 disease resistance protein (TIR-NBS-LRR... 34 0.63
At4g18600.1 68417.m02755 expressed protein 33 1.1
At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing ... 33 1.9
At1g30900.1 68414.m03780 vacuolar sorting receptor, putative sim... 32 3.4
At5g01810.1 68418.m00100 CBL-interacting protein kinase 15 (CIPK... 31 4.5
At3g21370.1 68416.m02698 glycosyl hydrolase family 1 protein con... 31 4.5
At1g05440.1 68414.m00552 expressed protein ; expression supporte... 31 4.5
At4g14840.1 68417.m02281 expressed protein 31 5.9
At1g71820.1 68414.m08300 expressed protein 31 5.9
At3g14190.1 68416.m01793 expressed protein 31 7.8
>At1g03790.1 68414.m00360 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 393
Score = 39.9 bits (89), Expect = 0.013
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 393 TELCKDMKECLAKFANFALNDKEAEVKFPDSVSPPLQEPSPTSAGPMPVFSKST 446
TE CKD K C K FA + ++ V P++VS PSP + P +F S+
Sbjct: 161 TEACKDGKHCKRKVCFFAHSPRQLRVLPPENVSGVSASPSPAAKNPCCLFCSSS 214
>At1g63730.1 68414.m07212 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 966
Score = 34.3 bits (75), Expect = 0.63
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 683 GRDDYKEMLLSVSAQFVANNVFEFDSK-----QNKSPEPSRGLEESR-DLLSLQKKYFNS 736
G D K +L + QF+ N + FD + Q SPE +RG+ ESR ++ L K Y +S
Sbjct: 21 GPDVRKTVLSHLRKQFICNGITMFDDQRIERGQTISPELTRGIRESRISIVVLSKNYASS 80
>At4g18600.1 68417.m02755 expressed protein
Length = 1907
Score = 33.5 bits (73), Expect = 1.1
Identities = 39/137 (28%), Positives = 56/137 (40%), Gaps = 19/137 (13%)
Query: 391 KETELCKDMKECLAKFANFALNDKEAEVKFPDSVSPPLQEPSPTSAGPMPVFSKSTQRLL 450
KE L K+ A A+ D++ + PDS P L+EP A P V L
Sbjct: 1452 KENILPKEPAAAYLALAEEAIFDQKFSPEVPDSTYPSLKEPEMHVAAPCVVTD------L 1505
Query: 451 PVNKFLQKNEIKE-DVANESAADVKPPPTAQDVDVAQAEPKQDADKGERKYGSFGQEIKK 509
P ++KE +V NE P TA DV + Q + + ER + S G +
Sbjct: 1506 PAKNI----KVKEGEVHNE-------PYTASDVSMNQKSGLLEPESTERTFPSSGGTV-T 1553
Query: 510 AMEECQNIIDSYTGTES 526
+ QN + + T ES
Sbjct: 1554 ISPDTQNSLPNGTSVES 1570
>At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing
protein
Length = 809
Score = 32.7 bits (71), Expect = 1.9
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 476 PPTAQDVDVAQAEPKQDADKGERKYG-SFGQEIKKA 510
PP DVDV + P+ D D G +YG S+G I ++
Sbjct: 691 PPRYADVDVRHSRPRLDYDVGPSQYGESYGDRIPRS 726
>At1g30900.1 68414.m03780 vacuolar sorting receptor, putative similar
to BP-80 vacuolar sorting receptor [Pisum sativum]
GI:1737222
Length = 631
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 1096 NVDAKLLDCELVETLKAAFEDGEQIVLETQSSEEL 1130
N+ + L+D TLK A + GE++VL+ SE L
Sbjct: 147 NIPSALIDFSFANTLKQALKKGEEVVLKIDWSESL 181
>At5g01810.1 68418.m00100 CBL-interacting protein kinase 15 (CIPK15)
identical to CBL-interacting protein kinase 15
[Arabidopsis thaliana] gi|13249134|gb|AAK16692;
identical to novel serine/threonine protein kinase
[Arabidopsis thaliana] gi|1777312|dbj|BAA06311; contains
Pfam profiles PF00069: Protein kinase domain and
PF03822: NAF domain
Length = 421
Score = 31.5 bits (68), Expect = 4.5
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 415 EAEVKFPDSVSPPLQEPSPTSAGPMPVFSKSTQRLLPVNKFLQ--KNEIKEDVANESAAD 472
+AEVKFP+ ++P + P P ST++++ + F + + E+KE V E+ D
Sbjct: 226 KAEVKFPNWLAPGAKRLLKRILDPNPNTRVSTEKIMKSSWFRKGLQEEVKESVEEETEVD 285
Query: 473 VK 474
+
Sbjct: 286 AE 287
>At3g21370.1 68416.m02698 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to beta-glucosidase (GI:757740) [Brassica
napus]; similar to beta-glucosidase GB:AAB64244 from
[Arabidopsis thaliana], (Plant Mol. Biol. 34 (1), 57-68
(1997))
Length = 527
Score = 31.5 bits (68), Expect = 4.5
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 906 DPETAANIILDMSDLKAEKPDSNPELKNQTNKKKRQYFLQR-LKALNRAYMESLPKESIT 964
D + II+ + + D + +L N R+Y+LQR L ALN A E K ++T
Sbjct: 407 DRYNSPEIIITENGYGEDLGDKDTDLSVALNDHNRKYYLQRHLLALNEAICED--KVNVT 464
Query: 965 SEEWLVMLYMLDNFEEKMKDSFT 987
S + ++DNFE +D +T
Sbjct: 465 S---YFLWSLMDNFE--WQDGYT 482
>At1g05440.1 68414.m00552 expressed protein ; expression supported by
MPSS
Length = 393
Score = 31.5 bits (68), Expect = 4.5
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 1110 LKAAFEDGEQIVLETQSSEELAKYSAQALRNAKQTLNAVAFKTMTKPAQKADGEACDTPR 1169
+K+ + + I ET + L S +++ ++ T T+ ++ D C P
Sbjct: 1 MKSRANENQMINRETMKGKILVSPSEKSMTSSTTTTTTTTTTVSTEDWERRDSN-CYFP- 58
Query: 1170 TDCKWTSDCVCDTCSPTLDDT 1190
DC+ ++C C+ C +L+ T
Sbjct: 59 -DCRKDANCSCEICLDSLNAT 78
>At4g14840.1 68417.m02281 expressed protein
Length = 555
Score = 31.1 bits (67), Expect = 5.9
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 867 MKLSKMAEKDFAVKSLKFKYLDVVKRCSESVQLAAWIQNDPETAANIILDMSDLKAEKPD 926
MKLS + EKDF+ L + +E LAA ++ DP +A I+ + ++
Sbjct: 362 MKLSSLLEKDFS-------SLFMSNEATEMASLAAKLKKDPSLSAEEIVRLKLIEEIPTF 414
Query: 927 SNPELKNQTNKKKRQYFLQRLKALNRAYMESLPKE 961
S +NQ+ + F L+ LN+A + SL E
Sbjct: 415 SEVFQENQSMIVEADRFFSALE-LNKAKVASLKYE 448
>At1g71820.1 68414.m08300 expressed protein
Length = 752
Score = 31.1 bits (67), Expect = 5.9
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 444 KSTQRLLPVNKFLQK-NEIKED-VANESAADVK-PPPTAQDVDVAQA--EPKQDADKGER 498
+ +LLP+ + LQ + IK D +A + A D + A+ V+ AQA E ++K
Sbjct: 16 REVAKLLPLPELLQSISSIKADYIARQQANDAQLSTMVAEQVEQAQAGLESLSSSEKTIY 75
Query: 499 KYGSFGQEIKKAMEECQNIIDSY 521
+ I K +ECQ +ID++
Sbjct: 76 ELRDNFISIDKLCQECQTLIDNH 98
>At3g14190.1 68416.m01793 expressed protein
Length = 193
Score = 30.7 bits (66), Expect = 7.8
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 420 FPDSVSPPLQEPSPTSAGPMPVFSKSTQRLLPVNKFLQKNEIKEDVANESAADVKPPPTA 479
FPD +P ++ S T+A V SK T +L K + D+ N+S K ++
Sbjct: 12 FPDENAPIHRKKSVTAAS---VKSKGT--VLGQKKPGGARKALNDITNKSGIHAKAAASS 66
Query: 480 QDVDVAQAEPKQDADKGERKYGSFGQEIKKAMEECQNIIDSY 521
++ +A A K+ GER F + K ++E QN+ D +
Sbjct: 67 KNKQIASAAVKEIDIAGER----FLHDHSKCIKEQQNLWDDH 104
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.129 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,627,724
Number of Sequences: 28952
Number of extensions: 1164709
Number of successful extensions: 3267
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3261
Number of HSP's gapped (non-prelim): 16
length of query: 1503
length of database: 12,070,560
effective HSP length: 91
effective length of query: 1412
effective length of database: 9,435,928
effective search space: 13323530336
effective search space used: 13323530336
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 66 (30.7 bits)
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