Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001769-TA|BGIBMGA001769-PA|undefined
(327 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-1884|AAS64854.1| 200|Drosophila melanogaster CG30067-P... 32 1.2
AY122223-1|AAM52735.1| 993|Drosophila melanogaster RE21150p pro... 31 2.2
BT025232-1|ABF17923.1| 993|Drosophila melanogaster FI01005p pro... 31 2.9
AF289998-1|AAG02463.1| 993|Drosophila melanogaster thyroid horm... 31 2.9
AE014296-1393|AAF50469.2| 993|Drosophila melanogaster CG7999-PA... 31 2.9
AY061193-1|AAL28741.1| 554|Drosophila melanogaster LD15362p pro... 30 5.0
AE014298-2588|AAF48744.2| 554|Drosophila melanogaster CG8316-PA... 30 5.0
AE014296-2069|AAS65018.1| 1799|Drosophila melanogaster CG33265-P... 29 6.6
>AE013599-1884|AAS64854.1| 200|Drosophila melanogaster CG30067-PB,
isoform B protein.
Length = 200
Score = 31.9 bits (69), Expect = 1.2
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Query: 171 PVPEWLLGVYHSWCEISALVYTLIGADMSVERVSEDWVYRARFGCHCRLCLCTANNSAAL 230
P+P W GV++ C SA I A +S+ R+S+ V A F CRL C N S+ L
Sbjct: 41 PLPNW--GVFNRECHKSA-----IQASVSINRISKSKVNLANFLIKCRLD-CDFNASSVL 92
>AY122223-1|AAM52735.1| 993|Drosophila melanogaster RE21150p
protein.
Length = 993
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 76 QYLLPLLSEQVSSANNAPERFLIRHEDILQLLASAEENARDSNPLADEVPL 126
Q+L PL SE++SS NA ER + ++ I ++ + L PL
Sbjct: 646 QFLAPLTSEELSSQENAKERLALSYQIIRKMQHDVHPATSTKSRLISHSPL 696
>BT025232-1|ABF17923.1| 993|Drosophila melanogaster FI01005p
protein.
Length = 993
Score = 30.7 bits (66), Expect = 2.9
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 76 QYLLPLLSEQVSSANNAPERFLIRHEDILQLLASAEENARDSNPLADEVPL 126
Q+L PL SE++SS NA ER + ++ I ++ + L PL
Sbjct: 646 QFLAPLTSEELSSQENAKERLALSYQIIRKMQHDVHPAPSTKSRLISHSPL 696
>AF289998-1|AAG02463.1| 993|Drosophila melanogaster thyroid hormone
receptor-associatedprotein TRAP100 protein.
Length = 993
Score = 30.7 bits (66), Expect = 2.9
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 76 QYLLPLLSEQVSSANNAPERFLIRHEDILQLLASAEENARDSNPLADEVPL 126
Q+L PL SE++SS NA ER + ++ I ++ + L PL
Sbjct: 646 QFLAPLTSEELSSQENAKERLALSYQIIRKMQHDVHPAPSTKSRLISHSPL 696
>AE014296-1393|AAF50469.2| 993|Drosophila melanogaster CG7999-PA
protein.
Length = 993
Score = 30.7 bits (66), Expect = 2.9
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 76 QYLLPLLSEQVSSANNAPERFLIRHEDILQLLASAEENARDSNPLADEVPL 126
Q+L PL SE++SS NA ER + ++ I ++ + L PL
Sbjct: 646 QFLAPLTSEELSSQENAKERLALSYQIIRKMQHDVHPAPSTKSRLISHSPL 696
>AY061193-1|AAL28741.1| 554|Drosophila melanogaster LD15362p
protein.
Length = 554
Score = 29.9 bits (64), Expect = 5.0
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 112 ENARDSNPLADEVPLQPHHALSHMDSFEFEEPP-VSPDEEAALLHYICEAETD---VAVR 167
E+ SN +V P+ +SH++ +FE+ +SP EEA + + E ++D
Sbjct: 280 ESVAISNSPTKQVRFSPYPEISHIEEEKFEKTDWLSPSEEAGVPNAELEEDSDEMEATDE 339
Query: 168 EFEPVPE 174
+FE + E
Sbjct: 340 DFEEISE 346
>AE014298-2588|AAF48744.2| 554|Drosophila melanogaster CG8316-PA
protein.
Length = 554
Score = 29.9 bits (64), Expect = 5.0
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 112 ENARDSNPLADEVPLQPHHALSHMDSFEFEEPP-VSPDEEAALLHYICEAETD---VAVR 167
E+ SN +V P+ +SH++ +FE+ +SP EEA + + E ++D
Sbjct: 280 ESVAISNSPTKQVRFSPYPEISHIEEEKFEKTDWLSPSEEAGVPNAELEEDSDEMEATDE 339
Query: 168 EFEPVPE 174
+FE + E
Sbjct: 340 DFEEISE 346
>AE014296-2069|AAS65018.1| 1799|Drosophila melanogaster CG33265-PA
protein.
Length = 1799
Score = 29.5 bits (63), Expect = 6.6
Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 91 NAPERFLIRHEDILQLLASAEENARDSNPLADEVPL-QPHHALSHMDSFEFEEPPVSPDE 149
N PE R ED + + E D + D P+ + + +++ E D+
Sbjct: 1404 NDPEGSTTREEDTTVAIETTTEKPEDDTTVEDSTPIPEETTTVGQETTYDPEGSTTREDD 1463
Query: 150 EAALLHYICE-AETDVAVREFEPVPE 174
+ E E D V + P+PE
Sbjct: 1464 TTVAIETTTEKPEDDTTVEDSTPIPE 1489
Score = 29.1 bits (62), Expect = 8.8
Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 91 NAPERFLIRHEDILQLLASAEENARDSNPLADEVPL-QPHHALSHMDSFEFEEPPVSPDE 149
N PE R ED + + E D + D P+ + + +++ E D+
Sbjct: 924 NDPEGSTTREEDTTVAIETTTEKPEDDTTVEDSTPIPEETTTVGQETTYDPEGSTTREDD 983
Query: 150 EAALLHYICE-AETDVAVREFEPVPE 174
+ E E D V + P+PE
Sbjct: 984 TTVAIDTTTEKPEDDTTVEDSTPIPE 1009
Score = 29.1 bits (62), Expect = 8.8
Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 91 NAPERFLIRHEDILQLLASAEENARDSNPLADEVPL-QPHHALSHMDSFEFEEPPVSPDE 149
N PE R ED + + E D + D P+ + + +++ E D+
Sbjct: 1164 NDPEGSTTREEDTTVAIETTTEKPEDDTTVEDSTPIPEETTTVGQETTYDPEGSTTREDD 1223
Query: 150 EAALLHYICE-AETDVAVREFEPVPE 174
+ E E D V + P+PE
Sbjct: 1224 TTVAIDTTTEKPEDDTTVEDSTPIPE 1249
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.320 0.133 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,968,113
Number of Sequences: 52641
Number of extensions: 583419
Number of successful extensions: 1218
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1212
Number of HSP's gapped (non-prelim): 10
length of query: 327
length of database: 24,830,863
effective HSP length: 85
effective length of query: 242
effective length of database: 20,356,378
effective search space: 4926243476
effective search space used: 4926243476
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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