BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001766-TA|BGIBMGA001766-PA|IPR005221|Phosphatidylserine decarboxylase, IPR003817|Phosphatidylserine decarboxylase-related (288 letters) Database: human 224,733 sequences; 73,234,838 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CR456540-1|CAG30426.1| 409|Homo sapiens PISD protein. 272 7e-73 BC001482-1|AAH01482.1| 375|Homo sapiens phosphatidylserine deca... 272 7e-73 AL096768-4|CAB56394.1| 375|Homo sapiens phosphatidylserine deca... 272 7e-73 AL096768-1|CAI23032.1| 409|Homo sapiens phosphatidylserine deca... 272 7e-73 AL031255-3|CAI22447.1| 409|Homo sapiens phosphatidylserine deca... 272 7e-73 AL096768-3|CAI23033.1| 262|Homo sapiens phosphatidylserine deca... 153 7e-37 AL096768-2|CAI23031.1| 361|Homo sapiens phosphatidylserine deca... 151 3e-36 AL031255-2|CAI22446.1| 361|Homo sapiens phosphatidylserine deca... 151 3e-36 BC009315-1|AAH09315.1| 143|Homo sapiens phosphatidylserine deca... 150 6e-36 AL096768-5|CAM28331.1| 228|Homo sapiens phosphatidylserine deca... 119 1e-26 AF035304-1|AAB88186.1| 77|Homo sapiens protein ( Homo sapiens ... 60 1e-08 >CR456540-1|CAG30426.1| 409|Homo sapiens PISD protein. Length = 409 Score = 272 bits (668), Expect = 7e-73 Identities = 143/292 (48%), Positives = 184/292 (63%), Gaps = 15/292 (5%) Query: 3 PFRVTSRLWGKMAACEIPVSLRSFVYGTYIRMFSVNLNDAAVTDLKYYKSLSAFFTRPLR 62 P R+ SR WG++ E+P LR VY YI F VN+ +AAV DL +Y++LS FF R L+ Sbjct: 115 PTRLLSRAWGRLNQVELPHWLRRPVYSLYIWTFGVNMKEAAVEDLHHYRNLSEFFRRKLK 174 Query: 63 DGARYISAAPCV-SPCDGVVLNCGPADTDKIEQVKGVTYSLEEFLGENKWLK-------R 114 AR + V SP DG +LN G ++EQVKGVTYSLE FLG + Sbjct: 175 PQARPVCGLHSVISPSDGRILNFGQVKNCEVEQVKGVTYSLESFLGPRMCTEDLPFPPAA 234 Query: 115 KDESYYNSLLKNKENILHQCIIYLAPGDYHRFHAPCDWTATFRRHFSGKLLSVNPWLAKL 174 +S+ N L+ + N L+ C+IYLAPGDYH FH+P DWT + RRHF G L+SVNP +A+ Sbjct: 235 SCDSFKNQLVTREGNELYHCVIYLAPGDYHCFHSPTDWTVSHRRHFPGSLMSVNPGMARW 294 Query: 175 IPGLFTVNERAVYVGEWEYGFFSMTAVGATNVGSIEIFKDPELRTN----TKGKRNR--- 227 I LF NER V G+W++GFFS+TAVGATNVGSI I+ D +L TN +KG N Sbjct: 295 IKELFCHNERVVLTGDWKHGFFSLTAVGATNVGSIRIYFDRDLHTNSPRHSKGSYNDFSF 354 Query: 228 VNELELGQVCMSKGELFGQFNMGSTIILLFEAPKDFKFDMAAGDKVLVGQSL 279 V V M KGE G+FN+GSTI+L+FEAPKDF F + G K+ G++L Sbjct: 355 VTHTNREGVPMRKGEHLGEFNLGSTIVLIFEAPKDFNFQLKTGQKIRFGEAL 406 >BC001482-1|AAH01482.1| 375|Homo sapiens phosphatidylserine decarboxylase protein. Length = 375 Score = 272 bits (668), Expect = 7e-73 Identities = 143/292 (48%), Positives = 184/292 (63%), Gaps = 15/292 (5%) Query: 3 PFRVTSRLWGKMAACEIPVSLRSFVYGTYIRMFSVNLNDAAVTDLKYYKSLSAFFTRPLR 62 P R+ SR WG++ E+P LR VY YI F VN+ +AAV DL +Y++LS FF R L+ Sbjct: 81 PTRLLSRAWGRLNQVELPHWLRRPVYSLYIWTFGVNMKEAAVEDLHHYRNLSEFFRRKLK 140 Query: 63 DGARYISAAPCV-SPCDGVVLNCGPADTDKIEQVKGVTYSLEEFLGENKWLK-------R 114 AR + V SP DG +LN G ++EQVKGVTYSLE FLG + Sbjct: 141 PQARPVCGLHSVISPSDGRILNFGQVKNCEVEQVKGVTYSLESFLGPRMCTEDLPFPPAA 200 Query: 115 KDESYYNSLLKNKENILHQCIIYLAPGDYHRFHAPCDWTATFRRHFSGKLLSVNPWLAKL 174 +S+ N L+ + N L+ C+IYLAPGDYH FH+P DWT + RRHF G L+SVNP +A+ Sbjct: 201 SCDSFKNQLVTREGNELYHCVIYLAPGDYHCFHSPTDWTVSHRRHFPGSLMSVNPGMARW 260 Query: 175 IPGLFTVNERAVYVGEWEYGFFSMTAVGATNVGSIEIFKDPELRTN----TKGKRNR--- 227 I LF NER V G+W++GFFS+TAVGATNVGSI I+ D +L TN +KG N Sbjct: 261 IKELFCHNERVVLTGDWKHGFFSLTAVGATNVGSIRIYFDRDLHTNSPRHSKGSYNDFSF 320 Query: 228 VNELELGQVCMSKGELFGQFNMGSTIILLFEAPKDFKFDMAAGDKVLVGQSL 279 V V M KGE G+FN+GSTI+L+FEAPKDF F + G K+ G++L Sbjct: 321 VTHTNREGVPMRKGEHLGEFNLGSTIVLIFEAPKDFNFQLKTGQKIRFGEAL 372 >AL096768-4|CAB56394.1| 375|Homo sapiens phosphatidylserine decarboxylase protein. Length = 375 Score = 272 bits (668), Expect = 7e-73 Identities = 143/292 (48%), Positives = 184/292 (63%), Gaps = 15/292 (5%) Query: 3 PFRVTSRLWGKMAACEIPVSLRSFVYGTYIRMFSVNLNDAAVTDLKYYKSLSAFFTRPLR 62 P R+ SR WG++ E+P LR VY YI F VN+ +AAV DL +Y++LS FF R L+ Sbjct: 81 PTRLLSRAWGRLNQVELPHWLRRPVYSLYIWTFGVNMKEAAVEDLHHYRNLSEFFRRKLK 140 Query: 63 DGARYISAAPCV-SPCDGVVLNCGPADTDKIEQVKGVTYSLEEFLGENKWLK-------R 114 AR + V SP DG +LN G ++EQVKGVTYSLE FLG + Sbjct: 141 PQARPVCGLHSVISPSDGRILNFGQVKNCEVEQVKGVTYSLESFLGPRMCTEDLPFPPAA 200 Query: 115 KDESYYNSLLKNKENILHQCIIYLAPGDYHRFHAPCDWTATFRRHFSGKLLSVNPWLAKL 174 +S+ N L+ + N L+ C+IYLAPGDYH FH+P DWT + RRHF G L+SVNP +A+ Sbjct: 201 SCDSFKNQLVTREGNELYHCVIYLAPGDYHCFHSPTDWTVSHRRHFPGSLMSVNPGMARW 260 Query: 175 IPGLFTVNERAVYVGEWEYGFFSMTAVGATNVGSIEIFKDPELRTN----TKGKRNR--- 227 I LF NER V G+W++GFFS+TAVGATNVGSI I+ D +L TN +KG N Sbjct: 261 IKELFCHNERVVLTGDWKHGFFSLTAVGATNVGSIRIYFDRDLHTNSPRHSKGSYNDFSF 320 Query: 228 VNELELGQVCMSKGELFGQFNMGSTIILLFEAPKDFKFDMAAGDKVLVGQSL 279 V V M KGE G+FN+GSTI+L+FEAPKDF F + G K+ G++L Sbjct: 321 VTHTNREGVPMRKGEHLGEFNLGSTIVLIFEAPKDFNFQLKTGQKIRFGEAL 372 >AL096768-1|CAI23032.1| 409|Homo sapiens phosphatidylserine decarboxylase protein. Length = 409 Score = 272 bits (668), Expect = 7e-73 Identities = 143/292 (48%), Positives = 184/292 (63%), Gaps = 15/292 (5%) Query: 3 PFRVTSRLWGKMAACEIPVSLRSFVYGTYIRMFSVNLNDAAVTDLKYYKSLSAFFTRPLR 62 P R+ SR WG++ E+P LR VY YI F VN+ +AAV DL +Y++LS FF R L+ Sbjct: 115 PTRLLSRAWGRLNQVELPHWLRRPVYSLYIWTFGVNMKEAAVEDLHHYRNLSEFFRRKLK 174 Query: 63 DGARYISAAPCV-SPCDGVVLNCGPADTDKIEQVKGVTYSLEEFLGENKWLK-------R 114 AR + V SP DG +LN G ++EQVKGVTYSLE FLG + Sbjct: 175 PQARPVCGLHSVISPSDGRILNFGQVKNCEVEQVKGVTYSLESFLGPRMCTEDLPFPPAA 234 Query: 115 KDESYYNSLLKNKENILHQCIIYLAPGDYHRFHAPCDWTATFRRHFSGKLLSVNPWLAKL 174 +S+ N L+ + N L+ C+IYLAPGDYH FH+P DWT + RRHF G L+SVNP +A+ Sbjct: 235 SCDSFKNQLVTREGNELYHCVIYLAPGDYHCFHSPTDWTVSHRRHFPGSLMSVNPGMARW 294 Query: 175 IPGLFTVNERAVYVGEWEYGFFSMTAVGATNVGSIEIFKDPELRTN----TKGKRNR--- 227 I LF NER V G+W++GFFS+TAVGATNVGSI I+ D +L TN +KG N Sbjct: 295 IKELFCHNERVVLTGDWKHGFFSLTAVGATNVGSIRIYFDRDLHTNSPRHSKGSYNDFSF 354 Query: 228 VNELELGQVCMSKGELFGQFNMGSTIILLFEAPKDFKFDMAAGDKVLVGQSL 279 V V M KGE G+FN+GSTI+L+FEAPKDF F + G K+ G++L Sbjct: 355 VTHTNREGVPMRKGEHLGEFNLGSTIVLIFEAPKDFNFQLKTGQKIRFGEAL 406 >AL031255-3|CAI22447.1| 409|Homo sapiens phosphatidylserine decarboxylase protein. Length = 409 Score = 272 bits (668), Expect = 7e-73 Identities = 143/292 (48%), Positives = 184/292 (63%), Gaps = 15/292 (5%) Query: 3 PFRVTSRLWGKMAACEIPVSLRSFVYGTYIRMFSVNLNDAAVTDLKYYKSLSAFFTRPLR 62 P R+ SR WG++ E+P LR VY YI F VN+ +AAV DL +Y++LS FF R L+ Sbjct: 115 PTRLLSRAWGRLNQVELPHWLRRPVYSLYIWTFGVNMKEAAVEDLHHYRNLSEFFRRKLK 174 Query: 63 DGARYISAAPCV-SPCDGVVLNCGPADTDKIEQVKGVTYSLEEFLGENKWLK-------R 114 AR + V SP DG +LN G ++EQVKGVTYSLE FLG + Sbjct: 175 PQARPVCGLHSVISPSDGRILNFGQVKNCEVEQVKGVTYSLESFLGPRMCTEDLPFPPAA 234 Query: 115 KDESYYNSLLKNKENILHQCIIYLAPGDYHRFHAPCDWTATFRRHFSGKLLSVNPWLAKL 174 +S+ N L+ + N L+ C+IYLAPGDYH FH+P DWT + RRHF G L+SVNP +A+ Sbjct: 235 SCDSFKNQLVTREGNELYHCVIYLAPGDYHCFHSPTDWTVSHRRHFPGSLMSVNPGMARW 294 Query: 175 IPGLFTVNERAVYVGEWEYGFFSMTAVGATNVGSIEIFKDPELRTN----TKGKRNR--- 227 I LF NER V G+W++GFFS+TAVGATNVGSI I+ D +L TN +KG N Sbjct: 295 IKELFCHNERVVLTGDWKHGFFSLTAVGATNVGSIRIYFDRDLHTNSPRHSKGSYNDFSF 354 Query: 228 VNELELGQVCMSKGELFGQFNMGSTIILLFEAPKDFKFDMAAGDKVLVGQSL 279 V V M KGE G+FN+GSTI+L+FEAPKDF F + G K+ G++L Sbjct: 355 VTHTNREGVPMRKGEHLGEFNLGSTIVLIFEAPKDFNFQLKTGQKIRFGEAL 406 >AL096768-3|CAI23033.1| 262|Homo sapiens phosphatidylserine decarboxylase protein. Length = 262 Score = 153 bits (371), Expect = 7e-37 Identities = 79/168 (47%), Positives = 102/168 (60%), Gaps = 8/168 (4%) Query: 3 PFRVTSRLWGKMAACEIPVSLRSFVYGTYIRMFSVNLNDAAVTDLKYYKSLSAFFTRPLR 62 P R+ SR WG++ E+P LR VY YI F VN+ +AAV DL +Y++LS FF R L+ Sbjct: 81 PTRLLSRAWGRLNQVELPHWLRRPVYSLYIWTFGVNMKEAAVEDLHHYRNLSEFFRRKLK 140 Query: 63 DGARYISAAPCV-SPCDGVVLNCGPADTDKIEQVKGVTYSLEEFLGENKWLK-------R 114 AR + V SP DG +LN G ++EQVKGVTYSLE FLG + Sbjct: 141 PQARPVCGLHSVISPSDGRILNFGQVKNCEVEQVKGVTYSLESFLGPRMCTEDLPFPPAA 200 Query: 115 KDESYYNSLLKNKENILHQCIIYLAPGDYHRFHAPCDWTATFRRHFSG 162 +S+ N L+ + N L+ C+IYLAPGDYH FH+P DWT + RRHF G Sbjct: 201 SCDSFKNQLVTREGNELYHCVIYLAPGDYHCFHSPTDWTVSHRRHFPG 248 >AL096768-2|CAI23031.1| 361|Homo sapiens phosphatidylserine decarboxylase protein. Length = 361 Score = 151 bits (366), Expect = 3e-36 Identities = 78/166 (46%), Positives = 101/166 (60%), Gaps = 8/166 (4%) Query: 3 PFRVTSRLWGKMAACEIPVSLRSFVYGTYIRMFSVNLNDAAVTDLKYYKSLSAFFTRPLR 62 P R+ SR WG++ E+P LR VY YI F VN+ +AAV DL +Y++LS FF R L+ Sbjct: 105 PTRLLSRAWGRLNQVELPHWLRRPVYSLYIWTFGVNMKEAAVEDLHHYRNLSEFFRRKLK 164 Query: 63 DGARYISAAPCV-SPCDGVVLNCGPADTDKIEQVKGVTYSLEEFLGENKWLK-------R 114 AR + V SP DG +LN G ++EQVKGVTYSLE FLG + Sbjct: 165 PQARPVCGLHSVISPSDGRILNFGQVKNCEVEQVKGVTYSLESFLGPRMCTEDLPFPPAA 224 Query: 115 KDESYYNSLLKNKENILHQCIIYLAPGDYHRFHAPCDWTATFRRHF 160 +S+ N L+ + N L+ C+IYLAPGDYH FH+P DWT + RRHF Sbjct: 225 SCDSFKNQLVTREGNELYHCVIYLAPGDYHCFHSPTDWTVSHRRHF 270 Score = 80.2 bits (189), Expect = 8e-15 Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 7/87 (8%) Query: 200 AVGATNVGSIEIFKDPELRTNT----KGKRNR---VNELELGQVCMSKGELFGQFNMGST 252 AVGATNVGSI I+ D +L TN+ KG N V V M KGE G+FN+GST Sbjct: 272 AVGATNVGSIRIYFDRDLHTNSPRHSKGSYNDFSFVTHTNREGVPMRKGEHLGEFNLGST 331 Query: 253 IILLFEAPKDFKFDMAAGDKVLVGQSL 279 I+L+FEAPKDF F + G K+ G++L Sbjct: 332 IVLIFEAPKDFNFQLKTGQKIRFGEAL 358 >AL031255-2|CAI22446.1| 361|Homo sapiens phosphatidylserine decarboxylase protein. Length = 361 Score = 151 bits (366), Expect = 3e-36 Identities = 78/166 (46%), Positives = 101/166 (60%), Gaps = 8/166 (4%) Query: 3 PFRVTSRLWGKMAACEIPVSLRSFVYGTYIRMFSVNLNDAAVTDLKYYKSLSAFFTRPLR 62 P R+ SR WG++ E+P LR VY YI F VN+ +AAV DL +Y++LS FF R L+ Sbjct: 105 PTRLLSRAWGRLNQVELPHWLRRPVYSLYIWTFGVNMKEAAVEDLHHYRNLSEFFRRKLK 164 Query: 63 DGARYISAAPCV-SPCDGVVLNCGPADTDKIEQVKGVTYSLEEFLGENKWLK-------R 114 AR + V SP DG +LN G ++EQVKGVTYSLE FLG + Sbjct: 165 PQARPVCGLHSVISPSDGRILNFGQVKNCEVEQVKGVTYSLESFLGPRMCTEDLPFPPAA 224 Query: 115 KDESYYNSLLKNKENILHQCIIYLAPGDYHRFHAPCDWTATFRRHF 160 +S+ N L+ + N L+ C+IYLAPGDYH FH+P DWT + RRHF Sbjct: 225 SCDSFKNQLVTREGNELYHCVIYLAPGDYHCFHSPTDWTVSHRRHF 270 Score = 80.2 bits (189), Expect = 8e-15 Identities = 44/87 (50%), Positives = 55/87 (63%), Gaps = 7/87 (8%) Query: 200 AVGATNVGSIEIFKDPELRTNT----KGKRNR---VNELELGQVCMSKGELFGQFNMGST 252 AVGATNVGSI I+ D +L TN+ KG N V V M KGE G+FN+GST Sbjct: 272 AVGATNVGSIRIYFDRDLHTNSPRHSKGSYNDFSFVTHTNREGVPMRKGEHLGEFNLGST 331 Query: 253 IILLFEAPKDFKFDMAAGDKVLVGQSL 279 I+L+FEAPKDF F + G K+ G++L Sbjct: 332 IVLIFEAPKDFNFQLKTGQKIRFGEAL 358 >BC009315-1|AAH09315.1| 143|Homo sapiens phosphatidylserine decarboxylase protein. Length = 143 Score = 150 bits (363), Expect = 6e-36 Identities = 74/140 (52%), Positives = 94/140 (67%), Gaps = 7/140 (5%) Query: 147 HAPCDWTATFRRHFSGKLLSVNPWLAKLIPGLFTVNERAVYVGEWEYGFFSMTAVGATNV 206 H+P DWT + RRHF G L+SVNP +A+ I LF NER V G+W++GFFS+TAVGATNV Sbjct: 1 HSPTDWTVSHRRHFPGSLMSVNPGMARWIKELFCHNERVVLTGDWKHGFFSLTAVGATNV 60 Query: 207 GSIEIFKDPELRTN----TKGKRNR---VNELELGQVCMSKGELFGQFNMGSTIILLFEA 259 GSI I+ D +L TN +KG N V V M KGE G+FN+GSTI+L+FEA Sbjct: 61 GSIRIYFDRDLHTNSPRHSKGSYNDFSFVTHTNREGVPMRKGEHLGEFNLGSTIVLIFEA 120 Query: 260 PKDFKFDMAAGDKVLVGQSL 279 PKDF F + G K+ G++L Sbjct: 121 PKDFNFQLKTGQKIRFGEAL 140 >AL096768-5|CAM28331.1| 228|Homo sapiens phosphatidylserine decarboxylase protein. Length = 228 Score = 119 bits (287), Expect = 1e-26 Identities = 65/148 (43%), Positives = 87/148 (58%), Gaps = 8/148 (5%) Query: 3 PFRVTSRLWGKMAACEIPVSLRSFVYGTYIRMFSVNLNDAAVTDLKYYKSLSAFFTRPLR 62 P R+ SR WG++ E+P LR VY YI F VN+ +AAV DL +Y++LS FF R L+ Sbjct: 81 PTRLLSRAWGRLNQVELPHWLRRPVYSLYIWTFGVNMKEAAVEDLHHYRNLSEFFRRKLK 140 Query: 63 DGARYISAA-PCVSPCDGVVLNCGPADTDKIEQVKGVTYSLEEFLGENKWLK-------R 114 AR + +SP DG +LN G ++EQVKGVTYSLE FLG + Sbjct: 141 PQARPVCGLHSVISPSDGRILNFGQVKNCEVEQVKGVTYSLESFLGPRMCTEDLPFPPAA 200 Query: 115 KDESYYNSLLKNKENILHQCIIYLAPGD 142 +S+ N L+ + N L+ C+IYLAPGD Sbjct: 201 SCDSFKNQLVTREGNELYHCVIYLAPGD 228 >AF035304-1|AAB88186.1| 77|Homo sapiens protein ( Homo sapiens clone 23956 mRNA, partial cds. ). Length = 77 Score = 59.7 bits (138), Expect = 1e-08 Identities = 25/44 (56%), Positives = 33/44 (75%) Query: 236 VCMSKGELFGQFNMGSTIILLFEAPKDFKFDMAAGDKVLVGQSL 279 V M KGE G+FN+GSTI+L+FEAPKDF F + G K+ G++L Sbjct: 31 VPMRKGEHLGEFNLGSTIVLIFEAPKDFNFQLKTGQKIRFGEAL 74 Database: human Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 73,234,838 Number of sequences in database: 224,733 Lambda K H 0.323 0.138 0.427 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 42,099,230 Number of Sequences: 224733 Number of extensions: 1767907 Number of successful extensions: 2778 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 2739 Number of HSP's gapped (non-prelim): 13 length of query: 288 length of database: 73,234,838 effective HSP length: 89 effective length of query: 199 effective length of database: 53,233,601 effective search space: 10593486599 effective search space used: 10593486599 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.9 bits) S2: 65 (30.3 bits)
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