GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001766-TA|BGIBMGA001766-PA|IPR005221|Phosphatidylserine
decarboxylase, IPR003817|Phosphatidylserine decarboxylase-related
         (288 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    26   1.1  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   7.6  

>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 73  CVSPCDGVVLNCGPADTDKIEQVKGVTYSLEEFLGEN 109
           CV+P  G  L  GP  +D+ E + G  Y    F GE+
Sbjct: 520 CVAPSVGDELRTGPICSDRGECICGQCYCNPGFEGEH 556


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query: 30  TYIRMFSVNLNDAAVTDLKYYKSLSAFFT 58
           T IR+ S+N +D ++ DL Y +   A  T
Sbjct: 600 TDIRLTSINFSDDSMIDLSYSEDRLADIT 628


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.138    0.427 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 300,288
Number of Sequences: 2123
Number of extensions: 12677
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 2
length of query: 288
length of database: 516,269
effective HSP length: 63
effective length of query: 225
effective length of database: 382,520
effective search space: 86067000
effective search space used: 86067000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 48 (23.4 bits)