Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001765-TA|BGIBMGA001765-PA|IPR004827|Basic-leucine
zipper (bZIP) transcription factor, IPR006035|Ureohydrolase,
IPR008917|Eukaryotic transcription factor, DNA-binding
(389 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC651.09c |||RNA polymerase II associated Paf1 complex |Schizo... 31 0.28
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 30 0.48
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 28 2.0
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 28 2.6
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 27 3.4
SPAC22F3.02 |atf31||transcription factor Atf31|Schizosaccharomyc... 27 6.0
SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory... 27 6.0
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 27 6.0
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 27 6.0
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 27 6.0
SPBC9B6.05c |lsm3||U6 snRNP-associated protein Lsm3|Schizosaccha... 26 7.9
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 26 7.9
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 7.9
>SPBC651.09c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 31.1 bits (67), Expect = 0.28
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 249 NERLSKHDLSEAQLSLIRD-IRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKLRTQ 307
NE S HD ++ D + KN V + R + + EV + +RK
Sbjct: 305 NEPFSDHDFQRWHHQMMEDKLSMPSKNFVQRKLNDLRDMSKYVLSEKEVSDIINRKKELS 364
Query: 308 RDHHSLLAERQRLKERFAALY 328
R ++ AE+ RL++R A Y
Sbjct: 365 RVPSNIAAEKTRLRQRRQAAY 385
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 30.3 bits (65), Expect = 0.48
Identities = 21/102 (20%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 218 AQHLSRDEKRAKALGIPLEVQDIINLPMDEFNERLSKHDLSEAQLSLIRDIRRRGKNKVA 277
A+ R + A+ L + + +E ++ + L Q +++ R+ + +
Sbjct: 607 AKEEERQRREAERLAEQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQ 666
Query: 278 AQNCRKRKLDQITSLADEVRTVRDRKLRTQRDHHSLLAERQR 319
Q R++KL + AD + R+++LR + + +L ER+R
Sbjct: 667 KQKEREKKLKKQQQEADREKMAREQRLR-EEEEKRILEERKR 707
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 28.3 bits (60), Expect = 2.0
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 271 RGKNKVAAQNCRKRKLD----QITSLADEVRTVRDRKLRTQRDHHSLLA-ERQRLKERFA 325
R KN+ QN + ++ + + E+ V + ++R+ RD ++ E+QR K+ +A
Sbjct: 278 REKNEKLLQNVKTSEIPINAADLEGINPELLPVIEEEIRSFRDQSAMKKREKQRSKDEYA 337
Query: 326 ALYR 329
+LY+
Sbjct: 338 SLYK 341
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 27.9 bits (59), Expect = 2.6
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 225 EKRAKALGIPLEVQDIINLP-MDEFNERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRK 283
+K+ L DI + +DE R EAQ+S D ++R ++ V+ R
Sbjct: 1972 QKQISDLEASFAASDIERIKGIDECRNRDRTIRQLEAQISKFDDDKKRIQSSVSRLEERN 2031
Query: 284 RKLDQITSLADEVRTVRDRKLRTQRDHHSLLAERQRLK 321
+L L D + K +R H+L ER+R+K
Sbjct: 2032 AQLRN--QLEDVQASETQWKFALRRTEHALQEERERVK 2067
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 246 DEFNERLSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKLR 305
D F++ + +E + + + +I K+ N R D + S+A ++R R+++
Sbjct: 1263 DLFDDSIFSMSFAELKYTALSNIVEM--EKLGFANRRNNYQDMVNSIALDIRNKSRRRMQ 1320
Query: 306 TQRD----HHSLLAERQR 319
QR+ H SLL R++
Sbjct: 1321 RQRELDAGHQSLLNLREK 1338
>SPAC22F3.02 |atf31||transcription factor Atf31|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 209
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 256 DLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEV 296
D + ++L+ + + +N+ AAQ CR +K + +L D+V
Sbjct: 113 DENTSKLTGTKQSMLKARNRQAAQKCRIKKKKYLQTLQDQV 153
>SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory
factor |Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 125 GLHMHNDFGGRHQVAPPHVAGLQPALELNAPHSSHALLQGAVGPGFGVPERV 176
G+ N H + P VA A L+ SS A+GP +G+ + +
Sbjct: 30 GIKSRNRSSIGHSITDPQVASRINAFYLSNVQSSIPFETDAIGPAYGIGDMI 81
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 26.6 bits (56), Expect = 6.0
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 278 AQNCRKRKLDQITSL----ADEVRTVRDRKLRTQRDHHSLLAERQRLKERFAAL 327
A++ KRKLD ++ A+ ++TV + + + + +H A R+R K F L
Sbjct: 468 AEHYYKRKLDNAKAINALWAENLKTVVEEQDQIEERYHRSEAHRRRTKRAFRRL 521
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 203 LTDGSASDGGSSCTSAQHLSRDEKRAKALGIPLEVQDIINLPMDE 247
L S G S ++ S D +A +PL+V D +N+ ++E
Sbjct: 790 LNSKEKSTGKSGKKTSPQSSEDAANKEASSVPLKVPDKVNIEIEE 834
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 26.6 bits (56), Expect = 6.0
Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 252 LSKHDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKLRTQRDHH 311
LSK +S A+ + + RR KN+V +K ++ + L++ + +R Q+ +
Sbjct: 758 LSKQRISRAKTMMTPFVLRRRKNQVLNDLPKKTQIIEHCKLSENQLEIYNRYAALQK-NQ 816
Query: 312 SLLAERQRLKERFAALYRHVFQNLRDPEGRPLSSGQYSLQ-QAADGNVVLVPKMPQHQDH 370
L + +R K +N + +G+ LS+G +Q + A + +L K + D
Sbjct: 817 QLRRDDKRNKRS---------KNDEESDGKSLSAGHVLMQLRKAANHALLFRKF--YDDE 865
Query: 371 PMNRTSDDEMERK 383
+ + + D M+ +
Sbjct: 866 KLKQMAKDIMQEE 878
>SPBC9B6.05c |lsm3||U6 snRNP-associated protein
Lsm3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 93
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 287 DQITSLADEVRTVRDRKLRTQRDHHSLLAER 317
++I ++ D+ T +D+ L+T R H+ +L R
Sbjct: 51 EEIVTIFDDEETDKDKALKTIRKHYEMLFVR 81
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/78 (19%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 261 QLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKLRT-QRDHHSLLAERQR 319
QLS I + +++ + + RK+ ++ E + + ++++ + Q ++L +Q+
Sbjct: 48 QLSEINEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRKQK 107
Query: 320 LKERFAALYRHVFQNLRD 337
L E YR + + R+
Sbjct: 108 LSEELDH-YRAIISSKRE 124
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.2 bits (55), Expect = 7.9
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 258 SEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQITSLADEV-RTVRDRKLRTQRDHHSLLAE 316
SE SL++DI + K+ + + CR+ KL+ + DE+ R + R + SL++E
Sbjct: 1205 SEFNFSLLKDITSKWKDLLESFECRRLKLE---NNKDEILRNFSEFAKRVNTETLSLISE 1261
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.132 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,612,452
Number of Sequences: 5004
Number of extensions: 64057
Number of successful extensions: 195
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 187
Number of HSP's gapped (non-prelim): 18
length of query: 389
length of database: 2,362,478
effective HSP length: 74
effective length of query: 315
effective length of database: 1,992,182
effective search space: 627537330
effective search space used: 627537330
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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