GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001765-TA|BGIBMGA001765-PA|IPR004827|Basic-leucine
zipper (bZIP) transcription factor, IPR006035|Ureohydrolase,
IPR008917|Eukaryotic transcription factor, DNA-binding
         (389 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           26   1.5  
AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase...    25   3.6  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   4.7  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    24   6.2  
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    24   8.2  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    24   8.2  

>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 4/59 (6%)

Query: 136 HQVAPPHVAGLQPALELNAPHSSHALLQGAVGPGFG----VPERVRHNHTYSAPLAAPP 190
           HQ     V   QP + +  P  S     G+   G      + +RV   H  S+P  APP
Sbjct: 18  HQTLTTQVHPSQPPVPMLVPIPSRTASTGSASSGHSGSSSLYDRVPREHATSSPYHAPP 76


>AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase
           alternate isoform protein.
          Length = 257

 Score = 25.0 bits (52), Expect = 3.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 171 GVPERVRHNHTYSAPLAAPPHAPTV 195
           G+ E  RH +TY   L  PP+  +V
Sbjct: 170 GMQELNRHYYTYKGSLTTPPYFESV 194


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.6 bits (51), Expect = 4.7
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 275 KVAAQNCRKRKLDQITSLADEVRTVRDRKLRTQRDHHSLLAERQRLKE 322
           K + +N +K K D+I S+ DEV   +    +   +   L  E  +L+E
Sbjct: 924 KTSERNVQKSK-DKINSMEDEVEAAQSAIRKGNDERTQLEEEANKLRE 970


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 24.2 bits (50), Expect = 6.2
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 286 LDQITSLADEVRTVRDRKLRTQRDHHSLLAERQRLKERFAALYR 329
           LD+IT LA+E+     ++L    DH  +     R K    A +R
Sbjct: 255 LDEIT-LAEEIAEALKQQLEIDVDHKEIKVREARTKGTQKATFR 297


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.8 bits (49), Expect = 8.2
 Identities = 13/52 (25%), Positives = 26/52 (50%)

Query: 268 IRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKLRTQRDHHSLLAERQR 319
           ++R  KNK A +  +  + D+    +  V  V+DR+ +   +  S  A R++
Sbjct: 5   VKRNIKNKGARKRQKSSESDEAEEESSSVVVVQDRRKKANPNVQSTSALRKK 56


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.8 bits (49), Expect = 8.2
 Identities = 13/52 (25%), Positives = 26/52 (50%)

Query: 268 IRRRGKNKVAAQNCRKRKLDQITSLADEVRTVRDRKLRTQRDHHSLLAERQR 319
           ++R  KNK A +  +  + D+    +  V  V+DR+ +   +  S  A R++
Sbjct: 5   VKRNIKNKGARKRQKSSESDEAEEESSSVVVVQDRRKKANPNVQSTSALRKK 56


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.132    0.394 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 382,876
Number of Sequences: 2123
Number of extensions: 15396
Number of successful extensions: 35
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 32
Number of HSP's gapped (non-prelim): 6
length of query: 389
length of database: 516,269
effective HSP length: 65
effective length of query: 324
effective length of database: 378,274
effective search space: 122560776
effective search space used: 122560776
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)