Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001764-TA|BGIBMGA001764-PA|undefined
(104 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0112 + 8447754-8447828,8448352-8448514,8448680-8448768,844... 33 0.056
01_06_0279 + 28119902-28120058,28120602-28120960,28121314-281213... 29 0.69
04_03_0213 + 12709396-12709564,12709659-12710217,12710312-127106... 28 1.6
02_03_0193 + 16211395-16212729,16212894-16213401,16213712-16214112 28 1.6
02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835,850... 28 1.6
10_08_0452 - 18038182-18038253,18038338-18038415,18038502-180385... 27 3.7
04_03_0087 - 10983528-10984114,10984578-10985160 26 4.9
09_06_0001 + 20114108-20115686,20115813-20115928,20116416-201173... 26 6.4
08_02_1187 - 25036023-25038443,25038636-25039939,25040033-25040135 26 6.4
02_02_0536 + 11304298-11304400,11304731-11305797,11306026-113064... 26 6.4
01_01_1116 + 8839946-8840048,8840142-8842064,8842192-8842307,884... 26 6.4
11_03_0099 - 9983044-9983052,9983145-9983939,9984031-9984301,998... 25 8.5
01_06_1334 + 36389179-36389289,36389777-36389839,36389930-363901... 25 8.5
>11_02_0112 +
8447754-8447828,8448352-8448514,8448680-8448768,
8448860-8449123,8449635-8449907
Length = 287
Score = 32.7 bits (71), Expect = 0.056
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 2 DLIEVLWKQDVDM-GFSLEDPIQPEGPQATKVLGEEIDKELLKAKDRI 48
DLI++ Q +M G ++DP EGP A + +G+ L+K DR+
Sbjct: 228 DLIDISDIQLFEMDGNCMDDPEPVEGPAAAQAIGQSTSATLIKGGDRV 275
>01_06_0279 +
28119902-28120058,28120602-28120960,28121314-28121393,
28121476-28121527,28121621-28121662,28121750-28121828,
28121991-28122022,28122102-28122170,28122412-28122528,
28122617-28122667,28123175-28123318
Length = 393
Score = 29.1 bits (62), Expect = 0.69
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 75 KEGLQERQPQYSKSAFPKVGDNA 97
KEGL+ + P+Y KSAF GD A
Sbjct: 255 KEGLKMKLPRYDKSAFGGRGDRA 277
>04_03_0213 +
12709396-12709564,12709659-12710217,12710312-12710606,
12710688-12710786,12710864-12711203,12711571-12711812
Length = 567
Score = 27.9 bits (59), Expect = 1.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 8 WKQDVDMGFSLEDPIQPEGPQATKVLG 34
W++ V+ LE P+ P+G + TK G
Sbjct: 64 WRERVEEYLGLEPPVAPDGQRQTKTSG 90
>02_03_0193 + 16211395-16212729,16212894-16213401,16213712-16214112
Length = 747
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 24 PEGPQATKVLGEEIDKELLKAKDRIQKNY 52
P TKV+G IDKE+LK+++ Q Y
Sbjct: 200 PAPSTETKVVGAGIDKEVLKSEETTQDLY 228
>02_02_0279 -
8507603-8507620,8508040-8508060,8508613-8508835,
8509204-8509553,8509631-8509729,8509811-8510105,
8510200-8510405,8510498-8510689,8510766-8511163,
8511258-8511444,8511473-8511528,8511800-8511872,
8512012-8512872,8514353-8514778
Length = 1134
Score = 27.9 bits (59), Expect = 1.6
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 8 WKQDVDMGFSLEDPIQPEGPQATKVLG 34
W++ V+ LE P+ P+G + TK G
Sbjct: 542 WRERVEEYLGLEPPVAPDGQRQTKTSG 568
>10_08_0452 -
18038182-18038253,18038338-18038415,18038502-18038579,
18039112-18039168,18039276-18039349,18039424-18039495,
18039609-18039670,18039861-18039962,18040378-18040490,
18040809-18040940,18041156-18041243,18041617-18041711,
18041793-18042023,18042567-18042680,18042765-18042866,
18043091-18043207,18043301-18044146
Length = 810
Score = 26.6 bits (56), Expect = 3.7
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 3 LIEV-LWKQDVDMGFSLEDPIQPEGPQATKVLGEEIDK 39
++EV +WK FS+ P+ P +ATK + E IDK
Sbjct: 415 ILEVGVWKLPEICSFSIGVPVGPMLAKATKSVSEIIDK 452
>04_03_0087 - 10983528-10984114,10984578-10985160
Length = 389
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 72 PEVKEGLQERQPQYSKSAFPKV 93
P V E + ++PQ S SAFPK+
Sbjct: 87 PSVLEMYEAKRPQLSPSAFPKL 108
>09_06_0001 +
20114108-20115686,20115813-20115928,20116416-20117394,
20118820-20119082
Length = 978
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 36 EIDKELLKAKDRIQKN 51
EIDK+LLK + R+QKN
Sbjct: 141 EIDKDLLKKELRLQKN 156
>08_02_1187 - 25036023-25038443,25038636-25039939,25040033-25040135
Length = 1275
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 36 EIDKELLKAKDRIQKN 51
EIDK+LLK + R+QKN
Sbjct: 290 EIDKDLLKRELRLQKN 305
>02_02_0536 +
11304298-11304400,11304731-11305797,11306026-11306416,
11307164-11308041
Length = 812
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 36 EIDKELLKAKDRIQKN 51
EIDK+LLK + R+QKN
Sbjct: 211 EIDKDLLKKELRLQKN 226
>01_01_1116 +
8839946-8840048,8840142-8842064,8842192-8842307,
8843340-8843763,8845187-8845452
Length = 943
Score = 25.8 bits (54), Expect = 6.4
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 36 EIDKELLKAKDRIQKN 51
EIDK+LLK + R+QKN
Sbjct: 290 EIDKDLLKKELRLQKN 305
>11_03_0099 -
9983044-9983052,9983145-9983939,9984031-9984301,
9984857-9985056
Length = 424
Score = 25.4 bits (53), Expect = 8.5
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 17 SLEDPIQPEGPQATKVLGEEIDKELLKAK 45
S ED I+PEG +A K DK KAK
Sbjct: 298 SPEDIIRPEGTKAAKARRNGKDKRKRKAK 326
>01_06_1334 +
36389179-36389289,36389777-36389839,36389930-36390169,
36390245-36390916
Length = 361
Score = 25.4 bits (53), Expect = 8.5
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 69 LLDPEVKEGLQERQPQYSKSAFPKVGDNALFWAL 102
LL+P V + ++ + K FP++ +A +AL
Sbjct: 178 LLNPSVLDRIELKPTSIEKEVFPRIASDAKLFAL 211
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.134 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,547,226
Number of Sequences: 37544
Number of extensions: 69744
Number of successful extensions: 141
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128
Number of HSP's gapped (non-prelim): 13
length of query: 104
length of database: 14,793,348
effective HSP length: 72
effective length of query: 32
effective length of database: 12,090,180
effective search space: 386885760
effective search space used: 386885760
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 53 (25.4 bits)
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