Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001763-TA|BGIBMGA001763-PA|undefined
         (379 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               27   0.26 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    27   0.35 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   5.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   5.7  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    22   7.5  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   7.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   7.5  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 27.1 bits (57), Expect = 0.26
 Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 101 NRGPILHTYLLNDVATGAVEPVSAAQSVATDQDAVSADDNVAQEVKVTDEDAQDQSREST 160
           ++GP  +T  +N VA G  +     +      D  S ++N+  + +  +  + D  R ++
Sbjct: 58  DKGPKNYTTPVNFVAGGIQQAGKPKEETDDKDDDESDNENIKSQKEFPNSSSSDDERPNS 117

Query: 161 VTVSDNFLHNRTESDI 176
           +    +F  N T+ DI
Sbjct: 118 IHQRASFSLN-TDGDI 132


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 26.6 bits (56), Expect = 0.35
 Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 6/106 (5%)

Query: 150 EDAQDQSRESTVTVSDNFLHNRTESDIFPEIASRTFDVTEFLVQQDNMQIKKEQDEAFDL 209
           E   D S+E      +NF+ +R  +D+F        +V   L  ++  + KK  D   D+
Sbjct: 79  EIESDNSKEVNDKKEENFIVDRLRNDLFECENKEKSNVC--LKFEEQKRRKKSLD---DV 133

Query: 210 KVNESNTDDFYSDN-AIDFATYFAARSEKIEVEEPNLYHQNMADLQ 254
           K+  ++  D Y  N   D  + + +  E++ +E    Y Q +  L+
Sbjct: 134 KILRNDRIDSYKSNLKCDKCSTYQSNGEEVCLENCTGYQQYLRLLE 179


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query: 51  EQEARTLIRPRFVHPKS 67
           +  +RT +RPR++ P S
Sbjct: 610 DSASRTAVRPRYISPAS 626


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query: 51  EQEARTLIRPRFVHPKS 67
           +  +RT +RPR++ P S
Sbjct: 700 DSASRTAVRPRYISPAS 716


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 45  GSDLSPEQEARTLIRPRFVHPKSLDNILVNYERQLFEELNSLGR 88
           G  + P +  + L+R   VH   LD + V ++ +    +N L R
Sbjct: 278 GGQIKPRKHEQRLLRNVGVHTVVLDLLQVPFDAKEDVRMNELMR 321


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 13/64 (20%), Positives = 28/64 (43%)

Query: 160 TVTVSDNFLHNRTESDIFPEIASRTFDVTEFLVQQDNMQIKKEQDEAFDLKVNESNTDDF 219
           T T S     + T S    +   + F V + ++ + N+   ++ DE   +   +S+  + 
Sbjct: 381 TTTASPTTEPSTTTSTTISQKHIKVFVVNKDILHEHNVDDNEDHDENMIIPPKKSDMSNM 440

Query: 220 YSDN 223
            SD+
Sbjct: 441 QSDD 444


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 8/26 (30%), Positives = 17/26 (65%)

Query: 126 QSVATDQDAVSADDNVAQEVKVTDED 151
           +SV   +  +SA + +A+E+K+  E+
Sbjct: 843 RSVKDRETIISAAEKIAEELKIVPEE 868


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 65  PKSLDNILVNYERQLFEELNSLGRYGPSAHNARMWQN 101
           P+S + IL++ +  L +  +S+ R    AH  R W++
Sbjct: 59  PRSKEEILLHAKDFLEQYFSSIRRLNSEAHRIR-WES 94


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.132    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,936
Number of Sequences: 429
Number of extensions: 3693
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 8
length of query: 379
length of database: 140,377
effective HSP length: 59
effective length of query: 320
effective length of database: 115,066
effective search space: 36821120
effective search space used: 36821120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 44 (21.8 bits)