Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001762-TA|BGIBMGA001762-PA|IPR013053|Hormone binding
         (167 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    24   0.76 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   3.1  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   3.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.1  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    20   9.3  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.8 bits (49), Expect = 0.76
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)

Query: 125 FLGNLVPELLEVFETEI-NEIVTDIF 149
           FL +LVP++ E FE  +    VTD F
Sbjct: 177 FLAHLVPKIAEFFEYRVLPRKVTDFF 202


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)

Query: 108 EITGIFNDPVLSEFVSRFLG 127
           EI  IF+ P+L +  S+F+G
Sbjct: 233 EIQTIFSVPLLMKIASQFVG 252


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)

Query: 108 EITGIFNDPVLSEFVSRFLG 127
           EI  IF+ P+L +  S+F+G
Sbjct: 58  EIQTIFSVPLLMKIASQFVG 77


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query: 28  RGLFGLSIDGEVPVIALDAGKYDLSVTAL 56
           RG  GL ID E P  + D   Y L +  L
Sbjct: 201 RGFDGLDIDWEYPKGSEDKKNYVLLLKEL 229


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 23  IISVLRGLFGLSIDGEVPVIALDAGKYDLSVTALGFTIY 61
           +  V+ G  G     +V ++    G+++ +V    FT+Y
Sbjct: 100 VFVVVMGYIGFIEWDKVEIVRSQEGRFEEAVIDYLFTVY 138


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.145    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,720
Number of Sequences: 317
Number of extensions: 1225
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 167
length of database: 114,650
effective HSP length: 52
effective length of query: 115
effective length of database: 98,166
effective search space: 11289090
effective search space used: 11289090
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.4 bits)
S2: 40 (20.2 bits)