Silkworm BLAST Result against spombe

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001762-TA|BGIBMGA001762-PA|IPR013053|Hormone binding
         (167 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1851.02 |||1-acylglycerol-3-phosphate O-acyltransferase|Schi...    26   2.5  
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||...    26   2.5  
SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate reductase/...    25   4.4  
SPAC17C9.10 |stm1||G-protein coupled receptor Stm1|Schizosacchar...    25   5.8  
SPCC1795.02c ||SPCC895.01|CaCA proton/calcium exchanger|Schizosa...    25   7.7  
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p...    25   7.7  

>SPAC1851.02 |||1-acylglycerol-3-phosphate
           O-acyltransferase|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 279

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 23  IISVLRGLFGLSIDGEVPVIALDAGKYDLSVTALGFTIYGNGEAKIRVIRP 73
           ++ + +G F L++  +VP+I +    Y   +      ++  GEA I+V+ P
Sbjct: 192 LLPLKKGAFHLAVQAQVPIIPIAIQTYG-HLFHPPTKVFNKGEALIKVLDP 241


>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1367

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 93   LQEADVAISLEGFQTEITGIFNDPVLSEFVSRFLGNLV 130
            +QEADV + ++G + +   +  D  + +F   FLG L+
Sbjct: 1043 IQEADVGVGIKGVEGQAASMSADYAIGQF--SFLGRLL 1078


>SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate
           reductase/acetylglutamate kinase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 885

 Score = 25.4 bits (53), Expect = 4.4
 Identities = 11/39 (28%), Positives = 25/39 (64%), Gaps = 2/39 (5%)

Query: 33  LSIDGEVPVIALDAGKYDLSVTALGFTIYGNGEAKIRVI 71
           + + G+VP++  +A K+ +SV   GF ++ +G+  + V+
Sbjct: 817 IHVQGDVPLVKDNAHKHHVSVG--GFGVHSSGKRAVIVV 853


>SPAC17C9.10 |stm1||G-protein coupled receptor
           Stm1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 271

 Score = 25.0 bits (52), Expect = 5.8
 Identities = 9/24 (37%), Positives = 17/24 (70%)

Query: 129 LVPELLEVFETEINEIVTDIFFEI 152
           L+P+LLE ++ +  E ++D+F  I
Sbjct: 33  LIPQLLENYKNQSGESISDLFLII 56


>SPCC1795.02c ||SPCC895.01|CaCA proton/calcium
           exchanger|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 412

 Score = 24.6 bits (51), Expect = 7.7
 Identities = 15/61 (24%), Positives = 25/61 (40%)

Query: 84  NIREGMALNLQEADVAISLEGFQTEITGIFNDPVLSEFVSRFLGNLVPELLEVFETEINE 143
           N +    LN+       SL  F TE   I + P L   ++   GN +  ++ V   +  E
Sbjct: 81  NAKSVFILNMLAIIPLASLLSFATEQLSIISGPTLGALLNASFGNAIELIVGVLALKRGE 140

Query: 144 I 144
           +
Sbjct: 141 L 141


>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 355

 Score = 24.6 bits (51), Expect = 7.7
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 3/52 (5%)

Query: 115 DPVLSEFVSRFLGNLVPELLEVFETEINEIVTDIF---FEIAQDIIKDLDLG 163
           D +L E +     NL+ +L    ET++++ VTD F    +   +++KD   G
Sbjct: 146 DRLLQERIDVLCKNLLDKLSIWTETDMSDRVTDAFKQKMQFEAELLKDESFG 197


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.323    0.145    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,917
Number of Sequences: 5004
Number of extensions: 24708
Number of successful extensions: 67
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 65
Number of HSP's gapped (non-prelim): 6
length of query: 167
length of database: 2,362,478
effective HSP length: 68
effective length of query: 99
effective length of database: 2,022,206
effective search space: 200198394
effective search space used: 200198394
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 51 (24.6 bits)