GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001762-TA|BGIBMGA001762-PA|IPR013053|Hormone binding
         (167 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC027859-1|AAH27859.2|  415|Homo sapiens SERPINI2 protein protein.     29   6.0  
AF130470-1|AAD34723.1|  405|Homo sapiens serpin-like protein pro...    29   6.0  
AB006423-1|BAA33766.1|  405|Homo sapiens TSA2004 protein.              29   6.0  

>BC027859-1|AAH27859.2|  415|Homo sapiens SERPINI2 protein protein.
          Length = 415

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 93  LQEADVAISLEGFQTEITGIFNDPVLSEFVSR-FLGNL-VPELLEVFETEINEIVTDIFF 150
           +QE +V ISL  F+ E    F D + S  ++  F G   +  + +  E  ++++   +FF
Sbjct: 288 MQEEEVEISLPRFKVEQKVDFKDVLYSLNITEIFSGGCDLSGITDSSEVYVSQVTQKVFF 347

Query: 151 EIAQD 155
           EI +D
Sbjct: 348 EINED 352


>AF130470-1|AAD34723.1|  405|Homo sapiens serpin-like protein
           protein.
          Length = 405

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 93  LQEADVAISLEGFQTEITGIFNDPVLSEFVSR-FLGNL-VPELLEVFETEINEIVTDIFF 150
           +QE +V ISL  F+ E    F D + S  ++  F G   +  + +  E  ++++   +FF
Sbjct: 278 MQEEEVEISLPRFKVEQKVDFKDVLYSLNITEIFSGGCDLSGITDSSEVYVSQVTQKVFF 337

Query: 151 EIAQD 155
           EI +D
Sbjct: 338 EINED 342


>AB006423-1|BAA33766.1|  405|Homo sapiens TSA2004 protein.
          Length = 405

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 93  LQEADVAISLEGFQTEITGIFNDPVLSEFVSR-FLGNL-VPELLEVFETEINEIVTDIFF 150
           +QE +V ISL  F+ E    F D + S  ++  F G   +  + +  E  ++++   +FF
Sbjct: 278 MQEEEVEISLPRFKVEQKVDFKDVLYSLNITEIFSGGCDLSGITDSSEVYVSQVTQKVFF 337

Query: 151 EIAQD 155
           EI +D
Sbjct: 338 EINED 342


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.323    0.145    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,232,852
Number of Sequences: 224733
Number of extensions: 667364
Number of successful extensions: 1228
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1228
Number of HSP's gapped (non-prelim): 3
length of query: 167
length of database: 73,234,838
effective HSP length: 85
effective length of query: 82
effective length of database: 54,132,533
effective search space: 4438867706
effective search space used: 4438867706
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)