Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001761-TA|BGIBMGA001761-PA|undefined
         (284 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    30   0.017
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.85 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.85 
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.0  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.0  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.0  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    22   4.5  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   7.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 30.3 bits (65), Expect = 0.017
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 3/46 (6%)

Query: 15   TAKSRPPRTESDTHPHFSNWTTPGTDRPD---VSPATDSTNSKTGP 57
            T  +RP  T + T P  +NW T GT  P    V P  D  +    P
Sbjct: 1060 TTTTRPTTTSTTTRPTTTNWPTQGTTIPPPAVVMPEVDKPSQPCEP 1105


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 120  FYLATTYKNAVQDIRKYFYIRYLYVNNKEYEIGYLTHEI-IYKYQIV--LELFQI 171
            FY+       +Q++R   Y  YL    K  + G L H+I   +++I+  +E+F +
Sbjct: 1010 FYICHVCYATIQEVRAKIYFFYLVKFYKVSKSGELIHKIETNEHEIIDKIEMFSL 1064


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 120 FYLATTYKNAVQDIRKYFYIRYLYVNNKEYEIGYLTHEI-IYKYQIV--LELFQI 171
           FY+       +Q++R   Y  YL    K  + G L H+I   +++I+  +E+F +
Sbjct: 291 FYICHVCYATIQEVRAKIYFFYLVKFYKVSKSGELIHKIETNEHEIIDKIEMFSL 345


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory
          receptor candidate 30 protein.
          Length = 394

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 53 SKTGPEDLEKELSPDAIANLLNKTKVSHN 81
          S T PE  + +LS    ANL+NK+   HN
Sbjct: 6  SNTPPE--KSQLSTADTANLINKSLGKHN 32


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory
          receptor candidate 29 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 53 SKTGPEDLEKELSPDAIANLLNKTKVSHN 81
          S T PE  + +LS    ANL+NK+   HN
Sbjct: 6  SNTPPE--KSQLSTADTANLINKSLGKHN 32


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory
          receptor candidate 7 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 53 SKTGPEDLEKELSPDAIANLLNKTKVSHN 81
          S T PE  + +LS    ANL+NK+   HN
Sbjct: 6  SNTPPE--KSQLSTADTANLINKSLGKHN 32


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 142 LYVNNKEYEIGYLTHEIIYKYQIVLELFQIIQKNTDII 179
           L  N+K  ++G L  +I  K Q++ +  QI+ +   ++
Sbjct: 11  LLANHKNVQVGDLVQKIAQKLQVLFQ-DQIVDEMVTVL 47


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/28 (25%), Positives = 16/28 (57%)

Query: 133 IRKYFYIRYLYVNNKEYEIGYLTHEIIY 160
           ++ Y +  ++  +   Y+IGY  H+I +
Sbjct: 88  VQIYIFSGFIVPSGVVYKIGYWLHQICH 115


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.133    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,323
Number of Sequences: 317
Number of extensions: 2898
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 8
length of query: 284
length of database: 114,650
effective HSP length: 56
effective length of query: 228
effective length of database: 96,898
effective search space: 22092744
effective search space used: 22092744
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)