Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001761-TA|BGIBMGA001761-PA|undefined
(284 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1420.04c |cox1101|cox11, SPAPB17E12.01c, cox11|fusion cytoch... 31 0.25
SPBC36.01c |||spermidine family transporter |Schizosaccharomyces... 30 0.43
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 30 0.43
SPBC530.15c ||SPBC661.01|spermidine family transporter |Schizosa... 29 1.0
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 28 1.3
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 28 1.7
SPBC106.12c |||THO complex subunit |Schizosaccharomyces pombe|ch... 28 1.7
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 27 2.3
SPAC637.12c |mst1||histone acetyltransferase Mst1|Schizosaccharo... 27 2.3
SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyce... 27 2.3
SPCC569.05c |||spermidine family transporter |Schizosaccharomyce... 27 3.1
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 27 3.1
SPBC36.02c |||spermidine family transporter |Schizosaccharomyces... 27 3.1
SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces... 27 3.1
SPAC11D3.05 |||membrane transporter|Schizosaccharomyces pombe|ch... 27 4.0
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 4.0
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 26 5.3
SPBC6B1.03c |||Pal1 family protein|Schizosaccharomyces pombe|chr... 26 5.3
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb... 26 5.3
SPBC409.06 |uch2||ubiquitin C-terminal hydrolase Uch2|Schizosacc... 26 5.3
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 26 7.0
SPCC16A11.06c |gpi10||pig-B|Schizosaccharomyces pombe|chr 3|||Ma... 26 7.0
>SPAC1420.04c |cox1101|cox11, SPAPB17E12.01c, cox11|fusion
cytochrome c oxidase assembly protein Cox1101,
mitochondrial ribosomal protein
Rsm22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 753
Score = 30.7 bits (66), Expect = 0.25
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 74 NKTKVSHNYSAADIYKNNKIQSSFITWEWTFDIRNFGDFNSFMRVCFYLATTYKNAVQDI 133
NK KV N +A I+ + S+ F F DFNS C + + + N +
Sbjct: 496 NKPKVERNTTADPIFVGKRFYST--NRHKAFS--RFADFNSHRFPCIFTSFSCYNCISGT 551
Query: 134 RKYF--YIRYLYVNNKEYEIGYL 154
RKY Y R + N+ I YL
Sbjct: 552 RKYSRQYSRDKFHYNQRTTIYYL 574
>SPBC36.01c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 580
Score = 29.9 bits (64), Expect = 0.43
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 93 IQSSFITWEWTFDIRNFGDFNSFMRV---C--FYLATTYKNAVQDIRKYFYIRYLYVNNK 147
+ S++ W WT I +F F S + + C YL T +N VQ+ R+ + ++ ++
Sbjct: 286 LTKSYLGWRWTEYITSFMGFLSIILIYLFCEETYLKTITENKVQEYREITGNQLVHARSE 345
Query: 148 EYEIGYLTHEIIYKYQIV 165
E + +II Y ++
Sbjct: 346 EESLS--ARDIIMNYLLI 361
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 29.9 bits (64), Expect = 0.43
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 13 SSTAKSRPPRTESDTHPHFSNWTTPGTDRPDVSPATDSTN--SKTGPEDLEKELSPDA 68
S+TA S PP + + +N T+ G PATD+T SKTGP K P A
Sbjct: 346 STTATSAPPLSNNTKPAEGANQTSSGFSFG--KPATDTTTSTSKTGPLFGNKPADPSA 401
>SPBC530.15c ||SPBC661.01|spermidine family transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 516
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 93 IQSSFITWEWTFDIRNFGDFNSFMRVCFYLATTYKNAVQDIR 134
I S++ W WT I F +F + + TY + +IR
Sbjct: 222 IGKSYLGWRWTSYITAIMGFTAFTSMIIFHRETYTRTITEIR 263
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 28.3 bits (60), Expect = 1.3
Identities = 22/103 (21%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 67 DAIANLLNKTKVSHNYSAADIYKNNKIQSSFITWEWTFDIRNFGDFNSFMRVC---FYLA 123
+ + NLL K +S+N++ ++ ++ ++ + +D + + SF ++C +Y +
Sbjct: 742 NCLRNLLEKQLLSYNFTDWFASLGSEYENVYVKFISHYDFSSLNVYASFQKLCCDLYYGS 801
Query: 124 TTYKNAVQDIRKYFYIRYLYVNNKEYEIGYLTHEIIYKYQIVL 166
Y ++ I + F +L N+ G+L +II K ++L
Sbjct: 802 DDYIHS--PILQVFASCWLKQNS---NYGFLNEDIIVKIVLIL 839
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 27.9 bits (59), Expect = 1.7
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 39 TDRPDVSPATDSTNSKTGPEDLEKELSP--DAIANLLNKTKVSHNYSAADIYKNNKIQSS 96
T + + SP DST+ +G +DL KEL+ + +L K K+S + A + + S
Sbjct: 487 TAKENCSPQQDSTSPTSGYQDLVKELAKEIEMRKSLELKLKLSQSNKAGPVKHRKRRPKS 546
Query: 97 --FITWEWTFDIRN 108
IT + FD N
Sbjct: 547 KRRITGKVVFDSPN 560
>SPBC106.12c |||THO complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 274
Score = 27.9 bits (59), Expect = 1.7
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 18 SRPPRTESDTHPHFSNWTTPGTDRPDVSPATDSTNSKTGPEDLEKELSPDAIANLLNKTK 77
+R P S ++ F N ++ DR S + S+N+ EDL+KEL A++ T
Sbjct: 175 ARKPSRSSRSNRGF-NRSSKKDDRSFRSSSKKSSNNSISHEDLDKELDEYAMSFHAASTV 233
Query: 78 VSHN 81
SH+
Sbjct: 234 SSHS 237
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/44 (34%), Positives = 19/44 (43%)
Query: 14 STAKSRPPRTESDTHPHFSNWTTPGTDRPDVSPATDSTNSKTGP 57
S A S P + T P FS+ +TP P S T + T P
Sbjct: 217 SYAASTQPEFQQTTSPIFSSSSTPPPPPPRPSQPTSGESQNTNP 260
>SPAC637.12c |mst1||histone acetyltransferase
Mst1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 27.5 bits (58), Expect = 2.3
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 7 EADHKGSSTAKSRP-PRTESDTHPHFSNWTTPGTDRPDVS-PATDSTN-SKTGPED---L 60
+A KG S+ + + R S T P + +TP T++P+ S P+ +S + S G E L
Sbjct: 88 KAHGKGKSSKRPKAVDRRRSITAPSKTEPSTPSTEKPEPSTPSGESDHGSNAGNESLPLL 147
Query: 61 EKELSPDAIA 70
E++ P++++
Sbjct: 148 EEDHKPESLS 157
>SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 27.5 bits (58), Expect = 2.3
Identities = 19/62 (30%), Positives = 27/62 (43%)
Query: 5 KVEADHKGSSTAKSRPPRTESDTHPHFSNWTTPGTDRPDVSPATDSTNSKTGPEDLEKEL 64
+ AD+K SS + E+ T P S T DV+ + NS T P + EL
Sbjct: 212 RAAADYKKSSIPLGKFSDGETQTMPSLSPSTENLQINNDVTYQAATDNSSTFPGSVANEL 271
Query: 65 SP 66
+P
Sbjct: 272 TP 273
>SPCC569.05c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 576
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 93 IQSSFITWEWTFDIRNFGDFNSFMRVCFYLATTYKNAV 130
+ S++ W WT I +F F + + V + TY A+
Sbjct: 282 LTKSYLGWRWTEYITSFMGFFALVIVYLFCDETYSKAI 319
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 27.1 bits (57), Expect = 3.1
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 4 SKVEADHKGSSTAKSRPPRTESDTHPHFSNWTTPGTDRPDVSPATDSTNSKTGPEDLEKE 63
S EA GSS+ +S +ES++ ++ ++ +D S + DS +S + D E E
Sbjct: 98 SSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDS-DSSSSSSDSESE 156
Query: 64 LSPD 67
S +
Sbjct: 157 SSSE 160
>SPBC36.02c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 93 IQSSFITWEWTFDIRNFGDFNSFMRVCFYLATTYKNAV 130
+ S++ W WT I +F F + + V + TY A+
Sbjct: 283 LTKSYLGWRWTEYITSFMGFFALIIVYLFCDETYSKAI 320
>SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 224
Score = 27.1 bits (57), Expect = 3.1
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 131 QDIRKYFYIRYLYVNNKEYEIGYLTHEIIYKYQIVLELFQIIQKNTDIIHLCNML-HEIE 189
+ I KY Y +Y + K+ +HE YK+Q I+K D IH N+L E+E
Sbjct: 6 KSIPKY-YCKYCQIFVKDTPFARRSHEQTYKHQ------DAIKKVMDDIHRSNLLRQELE 58
Query: 190 K 190
K
Sbjct: 59 K 59
>SPAC11D3.05 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 546
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 93 IQSSFITWEWTFDIRNFGDFNSFMRVCFYLATTYKNAVQDIRKYFYIRYLYVNNKEYEI 151
I S++ W WTF I + V + T+++ + D K Y+R N Y I
Sbjct: 254 ITQSYLEWRWTFWINMIWAAAVIVFVFIFFPETHEDTILDY-KAKYLRKTTGNTAYYTI 311
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 26.6 bits (56), Expect = 4.0
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 2 SSSKVEADHKGSSTAKSRPPRTESDTHPHFSNWTTPGTDRPDVSPATDSTNS 53
SSSK + SS S P + S + SN T TD D S A+ +T+S
Sbjct: 213 SSSKSSSKFSSSSFITSTTPASSSSSGAIVSNAKTASTD--DSSSASSATSS 262
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 33 NW-TTPGTDRPDVSPATDSTNSKTGPEDLEKELSPDAIANLL 73
NW T G + + P T T G ED+ ++ P+A A+ L
Sbjct: 162 NWETVRGINSRNPKPETTLTIPSLGLEDISMQVVPNAFASTL 203
>SPBC6B1.03c |||Pal1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 272
Score = 26.2 bits (55), Expect = 5.3
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Query: 38 GTDRPDVSPATDSTNSKTGPEDLEKELSPDAIANLLN--KTKVSHNYSAADIYKNNKIQS 95
G D S STN P D+ + DA N N K K S Y K N I++
Sbjct: 212 GVTDNDSSNVNSSTNESPNPTDINVCSNDDATDNTENNLKKKASFIYRLRKHLKRNSIET 271
>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 814
Score = 26.2 bits (55), Expect = 5.3
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 12 GSSTAKSRPPRTESDTHPHFSNWTTPGTD 40
G+ST ++R P E D + WT+ D
Sbjct: 162 GASTTQNRSPNDEEDEDEDYKWWTSENID 190
>SPBC409.06 |uch2||ubiquitin C-terminal hydrolase
Uch2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 300
Score = 26.2 bits (55), Expect = 5.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 113 NSFMRVCFYLATTYKNAVQDIRKYFYIRYLYVNNKEYEI 151
NSF R +++ + A + Y +I Y +NN YE+
Sbjct: 135 NSFARSDPFISEEVRAATDEDEVYHFIAYTNINNVFYEL 173
>SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1616
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 258 YLTSVRTTKTFIKKYWDLDYGWSIED 283
+L +V T + I D +Y WS+ED
Sbjct: 1394 FLLTVEATNSIISPNADYEYVWSLED 1419
>SPCC16A11.06c |gpi10||pig-B|Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 25.8 bits (54), Expect = 7.0
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 82 YSAADIYKNNKIQSSFITWEWTFDIRN 108
Y + ++ + + F+TWEWT IR+
Sbjct: 30 YQSLEVAHHFIFRYGFLTWEWTSAIRS 56
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.133 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,291,543
Number of Sequences: 5004
Number of extensions: 55274
Number of successful extensions: 208
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 191
Number of HSP's gapped (non-prelim): 25
length of query: 284
length of database: 2,362,478
effective HSP length: 72
effective length of query: 212
effective length of database: 2,002,190
effective search space: 424464280
effective search space used: 424464280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)
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