Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001761-TA|BGIBMGA001761-PA|undefined
(284 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14952| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.012
SB_17421| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_19516| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.61
SB_32685| Best HMM Match : RCSD (HMM E-Value=0.18) 31 1.4
SB_14478| Best HMM Match : DUF1168 (HMM E-Value=3) 31 1.4
SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_29343| Best HMM Match : PPI_Ypi1 (HMM E-Value=0.91) 30 1.9
SB_37730| Best HMM Match : DUF1151 (HMM E-Value=2.9) 30 2.5
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 30 2.5
SB_45660| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091) 29 3.3
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 29 4.3
SB_3886| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_31553| Best HMM Match : RCSD (HMM E-Value=2.7) 29 5.7
SB_6825| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_44630| Best HMM Match : HECT (HMM E-Value=0) 29 5.7
SB_45262| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_14952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 37.5 bits (83), Expect = 0.012
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 4/97 (4%)
Query: 78 VSHNYSAADIYKNNKIQSSFITWEWTFDIRNFGDFNSFMRVCFYLATTYKNAVQDIRKYF 137
+ + YS K Q S +T+ +T + SF R Y TY RKY
Sbjct: 235 MKYQYSLVTYSFTRKYQYSLVTYSFTRKYQYLLVTYSFTRKYQYSLVTYSFT----RKYQ 290
Query: 138 YIRYLYVNNKEYEIGYLTHEIIYKYQIVLELFQIIQK 174
Y Y K+Y+ +TH KYQ L + +K
Sbjct: 291 YSLVTYSFTKKYQYSLVTHSFTRKYQYSLVTYSFTRK 327
Score = 37.5 bits (83), Expect = 0.012
Identities = 27/95 (28%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 80 HNYSAADIYKNNKIQSSFITWEWTFDIRNFGDFNSFMRVCFYLATTYKNAVQDIRKYFYI 139
+ YS K Q S +T+ +T + +SF R Y TY RKY Y
Sbjct: 276 YQYSLVTYSFTRKYQYSLVTYSFTKKYQYSLVTHSFTRKYQYSLVTYSFT----RKYQYS 331
Query: 140 RYLYVNNKEYEIGYLTHEIIYKYQIVLELFQIIQK 174
Y K+Y+ +TH KYQ L + +K
Sbjct: 332 LVTYSFTKKYQYSLVTHSFTRKYQYSLVTYSFTRK 366
Score = 36.3 bits (80), Expect = 0.029
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 80 HNYSAADIYKNNKIQSSFITWEWTFDIRNFGDFNSFMRVCFYLATTYKNAVQDIRKYFYI 139
+ YS K Q S +T+ +T + +SF R Y TY RKY Y
Sbjct: 159 YQYSLVTYSFTRKYQYSLVTYSFTRKYQYSLVTHSFTRKYQYPLVTYSFT----RKYQYS 214
Query: 140 RYLYVNNKEYEIGYLTHEIIYKYQIVLELFQIIQK 174
Y ++Y+ +TH KYQ L + +K
Sbjct: 215 LVTYSFTRKYQYSLVTHSFTMKYQYSLVTYSFTRK 249
Score = 35.9 bits (79), Expect = 0.038
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 80 HNYSAADIYKNNKIQSSFITWEWTFDIRNFGDFNSFMRVCFYLATTYKNAVQDIRKYFYI 139
+ YS K Q S +T+ +T + +SF R Y TY RKY Y
Sbjct: 315 YQYSLVTYSFTRKYQYSLVTYSFTKKYQYSLVTHSFTRKYQYSLVTYSFT----RKYQYS 370
Query: 140 RYLYVNNKEYEIGYLTHEIIYKYQIVLELFQIIQK 174
Y ++Y+ +TH KYQ L + +K
Sbjct: 371 LVTYSFTRKYQYSLVTHSFTRKYQYSLVKYSFTKK 405
Score = 33.9 bits (74), Expect = 0.15
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Query: 80 HNYSAADIYKNNKIQSSFITWEWTFDIRNFGDFNSFMRVCFYLATTYKNAVQDIRKYFYI 139
+ YS K Q S +T+ +T + +SF R Y TY RKY Y
Sbjct: 29 YQYSLVTYSFTRKYQYSLVTYSFTRKYQYSLVTHSFTRKYQYSLVTYSFT----RKYQYS 84
Query: 140 RYLYVNNKEYEIGYLTHEIIYKYQIVLELFQIIQK 174
Y ++Y+ +T+ KYQ L + +K
Sbjct: 85 LVTYSFTRKYQYSLVTYSFTRKYQYSLVTYSFTRK 119
Score = 33.5 bits (73), Expect = 0.20
Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 8/115 (6%)
Query: 80 HNYSAADIYKNNKIQSSFITWEWTFDIRNFGDFNSFMRVCFYLATTYKNAVQDIRKYFYI 139
+ YS K Q S +T+ +T + SF R Y TY RKY Y
Sbjct: 94 YQYSLVTYSFTRKYQYSLVTYSFTRKYQYSLVTYSFTRKYQYSLVTYSFT----RKYQYS 149
Query: 140 RYLYVNNKEYEIGYLTHEIIYKYQIVLELFQIIQKNTDIIHLCNMLHEIEKKYEH 194
Y ++Y+ +T+ KYQ L + +K + H +KY++
Sbjct: 150 LVTYSFTRKYQYSLVTYSFTRKYQYSLVTYSFTRK----YQYSLVTHSFTRKYQY 200
Score = 33.1 bits (72), Expect = 0.27
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 92 KIQSSFITWEWTFDIRNFGDFNSFMRVCFYLATTYKNAVQDIRKYFYIRYLYVNNKEYEI 151
K Q S +T+ +T + SF R Y TY RKY Y Y ++Y+
Sbjct: 2 KYQYSLVTYSFTRKYQYSLVTYSFTRKYQYSLVTYSFT----RKYQYSLVTYSFTRKYQY 57
Query: 152 GYLTHEIIYKYQIVLELFQIIQK 174
+TH KYQ L + +K
Sbjct: 58 SLVTHSFTRKYQYSLVTYSFTRK 80
Score = 32.7 bits (71), Expect = 0.35
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Query: 80 HNYSAADIYKNNKIQSSFITWEWTFDIRNFGDFNSFMRVCFYLATTYKNAVQDIRKYFYI 139
+ YS K Q S +T+ +T + SF R Y TY RKY Y
Sbjct: 68 YQYSLVTYSFTRKYQYSLVTYSFTRKYQYSLVTYSFTRKYQYSLVTYSFT----RKYQYS 123
Query: 140 RYLYVNNKEYEIGYLTHEIIYKYQIVLELFQIIQK 174
Y ++Y+ +T+ KYQ L + +K
Sbjct: 124 LVTYSFTRKYQYSLVTYSFTRKYQYSLVTYSFTRK 158
Score = 32.7 bits (71), Expect = 0.35
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Query: 80 HNYSAADIYKNNKIQSSFITWEWTFDIRNFGDFNSFMRVCFYLATTYKNAVQDIRKYFYI 139
+ YS K Q S +T+ +T + SF R Y TY RKY Y
Sbjct: 81 YQYSLVTYSFTRKYQYSLVTYSFTRKYQYSLVTYSFTRKYQYSLVTYSFT----RKYQYS 136
Query: 140 RYLYVNNKEYEIGYLTHEIIYKYQIVLELFQIIQK 174
Y ++Y+ +T+ KYQ L + +K
Sbjct: 137 LVTYSFTRKYQYSLVTYSFTRKYQYSLVTYSFTRK 171
Score = 31.9 bits (69), Expect = 0.61
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Query: 80 HNYSAADIYKNNKIQSSFITWEWTFDIRNFGDFNSFMRVCFYLATTYKNAVQDIRKYFYI 139
+ YS K Q S +T+ +T + SF R Y TY RKY Y
Sbjct: 55 YQYSLVTHSFTRKYQYSLVTYSFTRKYQYSLVTYSFTRKYQYSLVTYSFT----RKYQYS 110
Query: 140 RYLYVNNKEYEIGYLTHEIIYKYQIVLELFQIIQK 174
Y ++Y+ +T+ KYQ L + +K
Sbjct: 111 LVTYSFTRKYQYSLVTYSFTRKYQYSLVTYSFTRK 145
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Query: 80 HNYSAADIYKNNKIQSSFITWEWTFDIRNFGDFNSFMRVCFYLATTYKNAVQDIRKYFYI 139
+ YS K Q S +T +T + SF R Y TY RKY Y
Sbjct: 42 YQYSLVTYSFTRKYQYSLVTHSFTRKYQYSLVTYSFTRKYQYSLVTYSFT----RKYQYS 97
Query: 140 RYLYVNNKEYEIGYLTHEIIYKYQIVLELFQIIQK 174
Y ++Y+ +T+ KYQ L + +K
Sbjct: 98 LVTYSFTRKYQYSLVTYSFTRKYQYSLVTYSFTRK 132
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 4/95 (4%)
Query: 80 HNYSAADIYKNNKIQSSFITWEWTFDIRNFGDFNSFMRVCFYLATTYKNAVQDIRKYFYI 139
+ YS K Q S +T+ +T + SF R Y T+ RKY Y
Sbjct: 16 YQYSLVTYSFTRKYQYSLVTYSFTRKYQYSLVTYSFTRKYQYSLVTHSFT----RKYQYS 71
Query: 140 RYLYVNNKEYEIGYLTHEIIYKYQIVLELFQIIQK 174
Y ++Y+ +T+ KYQ L + +K
Sbjct: 72 LVTYSFTRKYQYSLVTYSFTRKYQYSLVTYSFTRK 106
Score = 30.3 bits (65), Expect = 1.9
Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 4/111 (3%)
Query: 80 HNYSAADIYKNNKIQSSFITWEWTFDIRNFGDFNSFMRVCFYLATTYKNAVQDIRKYFYI 139
+ YS K Q S +T+ +T + SF R Y T+ RKY Y
Sbjct: 341 YQYSLVTHSFTRKYQYSLVTYSFTRKYQYSLVTYSFTRKYQYSLVTHSFT----RKYQYS 396
Query: 140 RYLYVNNKEYEIGYLTHEIIYKYQIVLELFQIIQKNTDIIHLCNMLHEIEK 190
Y K+Y+ + + KYQ L + +K + C + + +K
Sbjct: 397 LVKYSFTKKYQYSLVKYSFTRKYQYSLVKYSFTKKYQMVQESCTGISKCQK 447
>SB_17421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 555
Score = 33.1 bits (72), Expect = 0.27
Identities = 12/60 (20%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 127 KNAVQDIRKYFYIRYLYVNNKEYEIGYLTHEIIYKYQIVLELFQIIQKNTDIIHLCNMLH 186
+N + + FY+ Y+ V + + I TH Y++ ++ ++ T ++H+ ++H
Sbjct: 442 QNTTHSLSRVFYVLYI-VTHTSFHISSRTHSFTYRHARIVSHSELNYPKTSVVHVDQIVH 500
>SB_19516| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 31.9 bits (69), Expect = 0.61
Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 21 PRTESDTHPHFSNWTTPGTDRPDVSPATDSTNSKTGPEDLEKE-LSPDAIANLLNKTKVS 79
P T + T P T P T P P T+ T + T PE E P L KVS
Sbjct: 168 PTTATTTEPTTVPTTIP-TTIPTTLPTTEPTTAPTTPEPTTLEPTDPPTTVTTLKMRKVS 226
Query: 80 HNYSAADIYKNNKIQSSF 97
AD++ N+ I SF
Sbjct: 227 S--VLADVHGNDVIAFSF 242
>SB_32685| Best HMM Match : RCSD (HMM E-Value=0.18)
Length = 530
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 12 GSSTAKSRPPRTESDTHPHFSNWTTP-GTDRPDVSPATDSTNSKTGPEDLEKELSPD 67
G+ S +D+ N +P GTD D TD+T+S TG E+ + + D
Sbjct: 367 GTDNTDSPTGTDNTDSPTGTDNTDSPSGTDDTDCPTGTDNTDSPTGTENTDSHIGKD 423
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 12 GSSTAKSRPPRTESDTHPHFSNWTTP-GTDRPDVSPATDSTNSKTGPEDLEKELSPD 67
G+ S +D+ N +P GTD D TD+T+S TG +D + D
Sbjct: 430 GTDNTDSPTGTDNTDSPTSTDNTDSPSGTDNTDSPSGTDNTDSHTGTDDTDSPTGTD 486
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 12 GSSTAKSRPPRTESDTHPHFSNWTTP-GTDRPDVSPATDSTNSKTGPEDLEKELSPD 67
G+ S +D+H + +P GTD D TD T+S TG ++ + S D
Sbjct: 457 GTDNTDSPSGTDNTDSHTGTDDTDSPTGTDDTDSPTGTDDTDSHTGTDNTDSPTSTD 513
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 12 GSSTAKSRPPRTESDTHPHFSNWTTP-GTDRPDVSPATDSTNSKTGPEDLEKELSPD 67
G+ S +D+ N +P GTD D TD T+S TG +D + D
Sbjct: 439 GTDNTDSPTSTDNTDSPSGTDNTDSPSGTDNTDSHTGTDDTDSPTGTDDTDSPTGTD 495
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 24 ESDTHPHFSNWTTP-GTDRPDVSPATDSTNSKTGPEDLEKELSPD 67
++D+ N +P GTD D TD+T+S TG +D + D
Sbjct: 325 DTDSPTGTDNTDSPTGTDNTDSPTGTDNTDSPTGTDDTDSPTGTD 369
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 38 GTDRPDVSPATDSTNSKTGPEDLEKELSPD 67
GTD D TD+T+S TG E+ + S D
Sbjct: 286 GTDNTDSPTGTDNTDSPTGTENTDSPTSTD 315
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 9 DHKGSSTAKSRPPRTESDTHPHFSNWTTP--GTDRPDVSPATDSTNSKTGPEDLEKELSP 66
D S+ P T++ P ++ T GTD D TD T+S TG +D +
Sbjct: 444 DSPTSTDNTDSPSGTDNTDSPSGTDNTDSHTGTDDTDSPTGTDDTDSPTGTDDTDSHTGT 503
Query: 67 D 67
D
Sbjct: 504 D 504
>SB_14478| Best HMM Match : DUF1168 (HMM E-Value=3)
Length = 376
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 23 TESDTHPHFSNWTTPGTDRPDVSPATDSTNSKTGPEDLEKELSP 66
TE+++ P +W P D P P + + PE+ EK+ SP
Sbjct: 307 TETESKPQLPDWLEPVKDEPH-KPVDFTEGDVSEPEEKEKKTSP 349
>SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 6 VEADHKGSSTAKSRPPRTESDTHPHFSNWTTPGTDRPD-VSPATDSTNSKTGPEDLEKEL 64
++ S T+ S PP + + P TTP P+ V+P ST + P D K +
Sbjct: 505 IKESDSDSDTSDSSPPTSPTQQSPLE---TTPVLPLPEKVTPEPGSTTPPSPPPDSPKSV 561
Query: 65 SPDAIANLLNK 75
+P A+ + K
Sbjct: 562 APPALRSTAEK 572
>SB_29343| Best HMM Match : PPI_Ypi1 (HMM E-Value=0.91)
Length = 383
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 4 SKVEADHKGSSTAKSRPPRTESDTHPHFSNWTTPGTDRPDVSPATDSTNSKT 55
S+++ D K +ST S PP + +FSN ++ +PD + N KT
Sbjct: 128 SRIDGDEKRNSTLPSLPPLEVAPVTSNFSN-SSLTVKKPDTVSTSGKINKKT 178
>SB_37730| Best HMM Match : DUF1151 (HMM E-Value=2.9)
Length = 303
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 59 DLEKELSPDAIANLLNKTKV-SHNYSAADIYKNNKIQSSFITWEWT-FDIRNFGDFNSFM 116
+L + I +L++ K SH YS + K + ++ +++ T FD+R DF SF
Sbjct: 71 ELNDRIDTVEIRIILSEEKCQSHGYSKPETRKPSDLRKRKLSYFGTPFDLRTKSDFRSFF 130
Query: 117 RV 118
R+
Sbjct: 131 RI 132
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 10 HKGSSTAKSRPPRTESDTHPHFSNWTTPGTD--RPDVSPATDSTNSKTGP 57
H GS A P+ E++ +FS+W P P ++P +D+ GP
Sbjct: 336 HPGSGNASEPTPQQENNRPGNFSSWPNPSKTPALPGIAP-SDALKGTVGP 384
>SB_45660| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Query: 32 SNWTTPGTDRP-DVSPATDSTNSKTGPEDLEKELSPDAIANLLNKTKVSHNYSAADIYKN 90
+N + T+ P D S ATD KT P E +L +A + T V + A +Y+
Sbjct: 66 TNQASDSTESPRDNSDATDEAMEKTSPHSAEHDL--NAARRSIQYTPVDFSALEAKLYRK 123
Query: 91 NKIQSSFI 98
FI
Sbjct: 124 RNAFGGFI 131
>SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091)
Length = 761
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 15 TAKSRPPR-TESDTHPHFS-NWTTPGTDRPDVSPATDSTNSKTGPEDLE-KELSPDA 68
TA S+P R + T+ H S NW+ P P + P + T PE + +E+SP +
Sbjct: 292 TAFSQPSRWDDGQTNRHLSNNWSPPSEANPYI-PTIHIRDESTSPESVRMQEVSPSS 347
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 8 ADHKGSSTAKSRPPRTESDTHPHFSNWTTPGTDRPDVSPATDSTNSKTG 56
AD+ G+ST + T+++ P + TP D + D+T++ TG
Sbjct: 597 ADNTGNSTDTNTDTNTDTNAEPILTPILTPNVDTNTDTNTGDNTDTNTG 645
>SB_3886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 6 VEADHKGSSTAKSRPPR---TESDTHPHFSNWTTPGTDRPDVSPATDSTNSK-TGPEDLE 61
++ H+G S+ K+RPPR + S H H S+ + D T S+ LE
Sbjct: 79 LDLSHRGESSPKARPPRIDLSSSRLHKHHSDLSPKSAPASSAYSEIDFTKSQGLRQARLE 138
Query: 62 KE 63
KE
Sbjct: 139 KE 140
>SB_31553| Best HMM Match : RCSD (HMM E-Value=2.7)
Length = 139
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 9 DHKGSSTAKSRPPRTESDTH--PHFSNWTTPGTDRPDVSPATDSTNSKTGPEDLEKELSP 66
+ G P +S T P S P D P +PA S NSK+ P+ + P
Sbjct: 51 NENGDYDVPKSPEDVQSSTEDVPSSSKQELPNYDMPLTTPAKASNNSKSSPKGDQSTDIP 110
Query: 67 D 67
D
Sbjct: 111 D 111
>SB_6825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 67 DAIANLLNKTKVSHNYSAADIYKNNKIQSSFITWEWTFDIRNFGDFNSF-MRVCFYLATT 125
D + L K H+ + KN+++Q++ I + +TF I + F M + +
Sbjct: 62 DLMVGLSLGVKSVHDIAGFKNIKNDQLQNTGIFFNYTFLIGSVLSFKGIAMERAYAILAP 121
Query: 126 YKNAVQDIRKYFY-IRYLYV 144
YK+ + + + YF I Y+++
Sbjct: 122 YKHRLLENKVYFIGIAYIWI 141
>SB_44630| Best HMM Match : HECT (HMM E-Value=0)
Length = 1003
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 4 SKVEADHKGSSTAKSRPPRTESDTHPHFSNWTTPGTD-RPDVSPATDSTNSKTGPEDLEK 62
S V A GS + R S H N T TD P++ +T S N + ED EK
Sbjct: 292 SLVTAQDLGSISVFRRNSDVTSSKHNLSGNLVTNLTDIPPELLASTSSLNEFSTIEDFEK 351
Query: 63 ELSPDAIANLLNKTKVSH 80
E + + + + ++H
Sbjct: 352 ECALEMSPTYIQEFSLTH 369
>SB_45262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 102
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 20 PPRTESDTHPHFSNWTTPGTDRPDVSPATDSTNSKTGPEDLEKELSPDA 68
PPR + P + +P R + T + S+ P KELSP A
Sbjct: 41 PPRRKQHKAPKKNPVRSPPNHRAQTTKKTPTKTSQIDPTTTTKELSPQA 89
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.133 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,925,054
Number of Sequences: 59808
Number of extensions: 355788
Number of successful extensions: 1111
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1055
Number of HSP's gapped (non-prelim): 44
length of query: 284
length of database: 16,821,457
effective HSP length: 81
effective length of query: 203
effective length of database: 11,977,009
effective search space: 2431332827
effective search space used: 2431332827
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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