GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001761-TA|BGIBMGA001761-PA|undefined
         (284 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           26   1.1  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           25   2.5  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           24   4.3  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   9.9  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   9.9  

>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/53 (24%), Positives = 25/53 (47%)

Query: 14 STAKSRPPRTESDTHPHFSNWTTPGTDRPDVSPATDSTNSKTGPEDLEKELSP 66
          +T  +  P T +   P  +  TT  +     + +TD+T   + P+D++  L P
Sbjct: 46 TTTTTVAPTTTTTVAPGQTTTTTVASGPVTTTGSTDTTTPSSAPQDVKAALVP 98


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 3/58 (5%)

Query: 2   SSSKVEADHKGSSTAKSRPPRTESDTHPHFSNWTTPGTDRPDV---SPATDSTNSKTG 56
           S+    + H GSS+   R PR  + + P+ +  +   +    +   S    S+NS TG
Sbjct: 44  STGSASSGHSGSSSLYDRVPREHATSSPYHAPPSPANSHYEPMECHSAVNSSSNSSTG 101


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 13  SSTAKSRPPRTESDT-HPHFSNWTTPGTDRPDVSPATDSTNSKTGPEDLEKELSP 66
           ++T    P +T + T  P  +  TT  +     + +TD+T   + P+D++  L P
Sbjct: 54  TTTTTVAPGQTTTTTVAPGQTTTTTVASGPVTTTGSTDTTTPSSAPQDVKAALVP 108


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical
          protein protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 16/56 (28%), Positives = 26/56 (46%)

Query: 8  ADHKGSSTAKSRPPRTESDTHPHFSNWTTPGTDRPDVSPATDSTNSKTGPEDLEKE 63
          AD   SST++S      S T    S+  T  T   +   A  S+NS+   + L+++
Sbjct: 33 ADVPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGEPRAAGSSSNSRRNSKQLQRD 88


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical
          protein protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 16/56 (28%), Positives = 26/56 (46%)

Query: 8  ADHKGSSTAKSRPPRTESDTHPHFSNWTTPGTDRPDVSPATDSTNSKTGPEDLEKE 63
          AD   SST++S      S T    S+  T  T   +   A  S+NS+   + L+++
Sbjct: 33 ADVPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGEPRAAGSSSNSRRNSKQLQRD 88


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.133    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 272,944
Number of Sequences: 2123
Number of extensions: 10767
Number of successful extensions: 34
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29
Number of HSP's gapped (non-prelim): 5
length of query: 284
length of database: 516,269
effective HSP length: 63
effective length of query: 221
effective length of database: 382,520
effective search space: 84536920
effective search space used: 84536920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)