GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001761-TA|BGIBMGA001761-PA|undefined
         (284 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    26   0.44 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    26   0.44 
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        23   2.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.3  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   5.4  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    22   7.1  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   9.4  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   9.4  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   9.4  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 5/88 (5%)

Query: 59  DLEKELSPDAIANLLNKTKVSHNYSAADIYKNNKIQ--SSFITWE--WTFDIRNFGDFNS 114
           D+  E S  A+++  ++TK+S     A +Y  NK+Q  +  + W+   T  +R + D   
Sbjct: 66  DIYTEESVSALSSFYDRTKMSLQLVLAALYPPNKLQQWNEDLNWQPIATKYLRRYEDNIF 125

Query: 115 FMRVCFYLATTYKNAVQDIR-KYFYIRY 141
               C          ++  R KY + +Y
Sbjct: 126 LPEDCLLFTIELDRVLESPRGKYEFSKY 153


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 5/88 (5%)

Query: 59  DLEKELSPDAIANLLNKTKVSHNYSAADIYKNNKIQ--SSFITWE--WTFDIRNFGDFNS 114
           D+  E S  A+++  ++TK+S     A +Y  NK+Q  +  + W+   T  +R + D   
Sbjct: 81  DIYTEESVSALSSFYDRTKMSLQLVLAALYPPNKLQQWNEDLNWQPIATKYLRRYEDNIF 140

Query: 115 FMRVCFYLATTYKNAVQDIR-KYFYIRY 141
               C          ++  R KY + +Y
Sbjct: 141 LPEDCLLFTIELDRVLESPRGKYEFSKY 168


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query: 10 HKGSSTAKSRPPRTESDTHPHFS 32
          H GSS + S   RT S  +P+ S
Sbjct: 71 HSGSSASTSPAARTTSSMYPYVS 93


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 37  PGTDRPDVSPATDSTNSKTGPE 58
           P  D+P +SP +DS++S    E
Sbjct: 436 PHDDQPPLSPQSDSSSSSRSAE 457


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 61  EKELSPDAIANLLNKTKVSHNYSAADIYKNN 91
           E+   P  I++L NKT  ++N    + Y NN
Sbjct: 307 ERSREPKIISSLSNKTIHNNNNYNNNNYNNN 337


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 61  EKELSPDAIANLLNKTKVSHNYSAADIYK 89
           E+   P  I++L N    S+NY   + YK
Sbjct: 296 ERSKEPKIISSLSNSCNYSNNYYNNNNYK 324


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/30 (26%), Positives = 15/30 (50%)

Query: 145 NNKEYEIGYLTHEIIYKYQIVLELFQIIQK 174
           N  EY +   TH+I   Y +V +   ++ +
Sbjct: 247 NKTEYTLKIYTHDIPETYNVVRKFRDVLDE 276


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/15 (46%), Positives = 12/15 (80%)

Query: 142 LYVNNKEYEIGYLTH 156
           +Y NN E+EI +++H
Sbjct: 201 MYNNNTEWEIVHMSH 215


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/30 (26%), Positives = 15/30 (50%)

Query: 145 NNKEYEIGYLTHEIIYKYQIVLELFQIIQK 174
           N  EY +   TH+I   Y +V +   ++ +
Sbjct: 247 NKTEYTLKIYTHDIPETYNVVRKFRDVLDE 276


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.133    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,208
Number of Sequences: 429
Number of extensions: 3613
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 9
length of query: 284
length of database: 140,377
effective HSP length: 57
effective length of query: 227
effective length of database: 115,924
effective search space: 26314748
effective search space used: 26314748
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)