GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001760-TA|BGIBMGA001760-PA|undefined
         (112 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051668-1|AAK93092.1|  507|Drosophila melanogaster LD21785p pro...    26   9.7  
AE014296-2430|AAF49704.1|  507|Drosophila melanogaster CG5295-PA...    26   9.7  

>AY051668-1|AAK93092.1|  507|Drosophila melanogaster LD21785p
           protein.
          Length = 507

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 11/40 (27%), Positives = 23/40 (57%)

Query: 14  HMAVNFTIYDSLNAYHVLQSDYNEIKVEQNLFYEVLAKHE 53
           H+    T  D+L AY+   S+ N++KV +   ++ + +H+
Sbjct: 417 HVLKMTTHNDALYAYYYTDSNTNKVKVTEIFDFDEITEHD 456


>AE014296-2430|AAF49704.1|  507|Drosophila melanogaster CG5295-PA
           protein.
          Length = 507

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 11/40 (27%), Positives = 23/40 (57%)

Query: 14  HMAVNFTIYDSLNAYHVLQSDYNEIKVEQNLFYEVLAKHE 53
           H+    T  D+L AY+   S+ N++KV +   ++ + +H+
Sbjct: 417 HVLKMTTHNDALYAYYYTDSNTNKVKVTEIFDFDEITEHD 456


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.321    0.137    0.422 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,954,100
Number of Sequences: 52641
Number of extensions: 89760
Number of successful extensions: 236
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 234
Number of HSP's gapped (non-prelim): 2
length of query: 112
length of database: 24,830,863
effective HSP length: 75
effective length of query: 37
effective length of database: 20,882,788
effective search space: 772663156
effective search space used: 772663156
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 55 (26.2 bits)