GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001758-TA|BGIBMGA001758-PA|undefined
         (171 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    22   2.8  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   4.9  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   4.9  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   4.9  

>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
          determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 35 RRRIKNRALSERSDSSAIPSIQNPAQN 61
          + R +NR   ERS    I S  NP  N
Sbjct: 64 KERSRNRTERERSKEPKIISNNNPLSN 90


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/26 (34%), Positives = 11/26 (42%)

Query: 138 GRRGHGRKQTAPRRIVYCDSEDNVLD 163
           G   HG   TA    + CD +D   D
Sbjct: 72  GESKHGLTNTASHTRLSCDCDDKFYD 97


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/26 (34%), Positives = 11/26 (42%)

Query: 138 GRRGHGRKQTAPRRIVYCDSEDNVLD 163
           G   HG   TA    + CD +D   D
Sbjct: 77  GESKHGLTNTASHTRLSCDCDDKFYD 102


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/26 (34%), Positives = 11/26 (42%)

Query: 138 GRRGHGRKQTAPRRIVYCDSEDNVLD 163
           G   HG   TA    + CD +D   D
Sbjct: 77  GESKHGLTNTASHTRLSCDCDDKFYD 102


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.133    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,825
Number of Sequences: 429
Number of extensions: 1359
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 171
length of database: 140,377
effective HSP length: 54
effective length of query: 117
effective length of database: 117,211
effective search space: 13713687
effective search space used: 13713687
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 41 (20.6 bits)