Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001757-TA|BGIBMGA001757-PA|undefined
(303 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22F8.09 |rrp16|nop53|rRNA processing protein Rrp16 |Schizosa... 43 5e-05
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 34 0.029
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 33 0.067
SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 32 0.088
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 30 0.36
SPAC3C7.13c |||glucose-6-phosphate 1-dehydrogenase |Schizosaccha... 29 0.62
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 29 0.62
SPBC19C2.11c |||mitochondrial outer membrane protein |Schizosacc... 29 0.62
SPAC1420.01c ||SPAC56E4.08c|DUF1752 family protein|Schizosacchar... 28 1.4
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 28 1.4
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 1.9
SPCC1682.03c |mug174||meiotically upregulated gene Mug174|Schizo... 28 1.9
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 28 1.9
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 2.5
SPAC1486.03c |||RNA-binding splicing factor|Schizosaccharomyces ... 27 2.5
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 2.5
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 27 4.4
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 27 4.4
SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomy... 27 4.4
SPAC8F11.04 |||U3 snoRNP-associated protein Cic1/Utp30 family |S... 27 4.4
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 26 5.8
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 26 7.7
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 26 7.7
SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 26 7.7
SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces p... 26 7.7
>SPAC22F8.09 |rrp16|nop53|rRNA processing protein Rrp16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 419
Score = 43.2 bits (97), Expect = 5e-05
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 20/204 (9%)
Query: 25 YNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRER-YTIRLKAADQNVNTSVGSKT 83
YN D A K L +G K+E+ RI +L E++RI+++ + + +DQ+VN S+ S
Sbjct: 195 YNPDAAAWMKLLDTKGSEELKKEQKRISELEEKERIQKKAFEDKGLVSDQDVNHSIDSDD 254
Query: 84 ISTCED------TTKDKSQTPS---KIDTESISAKGLCENDESIKKGRSV-KVPITSTLI 133
S E ++K+K +T S KI L E ++ + R++ K P S +
Sbjct: 255 QSEHEQAETPIPSSKNKRKTRSQRNKIRQRREEELRLLEQKKNEELLRTIDKAPAISKKL 314
Query: 134 SDNDRTRIYKVVRFINRKPQKGSIQIDLTSRAKKTSKY-TETERREAKRPPEIASGV-DK 191
D K +F N+ + +I L + KK K+ E K E+ S + +
Sbjct: 315 QQKD-----KAEKFSNKAVSSSTTEIKL--KKKKFGKHRLPNNPLEIKLGDELTSSLREL 367
Query: 192 KPDIKNSGSRRRFRRKQVASPASL 215
KP+ R +++ P SL
Sbjct: 368 KPEGNLFADRYLSLQQRAMVPPSL 391
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 33.9 bits (74), Expect = 0.029
Identities = 51/248 (20%), Positives = 98/248 (39%), Gaps = 14/248 (5%)
Query: 39 RGDSSDKREKSRILDLAERKRIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTP 98
+ S+ K R L+E K + +YT + + D+ +S+ S T S+ K +TP
Sbjct: 432 KAGSAGKENSWRSKYLSEGKNSKAKYTAKQPSYDR-AGSSLASPTKSSASPLVKAPKETP 490
Query: 99 SKIDTESISAKGLCE---NDESIKKGRSVKVP--ITSTLISDNDRTRIYKVVRFINRKPQ 153
++ TE+ S + + + + K +S P ST+ TR+Y++ + + P
Sbjct: 491 ERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPK--DTIPS 548
Query: 154 KGSIQIDLTSRAKKTSKYTETERREAKRPPEIASGVDKKPDIKNSGSRRRFRRKQVASP- 212
+ I + KY + ++ + S P S + Q +SP
Sbjct: 549 RFKTSISTEVHDGRLKKYPYYHVKTPEKGTTVVSRTVTSPKSGAYASPSKASYNQDSSPN 608
Query: 213 ASLRKASFS-PPTEVAKWAPTCLNRETKPYYEAWVNTKLAAVSRGCDLNDRERTRLMETF 271
ASL + P+++ T L + + N +A S L+ +R + T
Sbjct: 609 ASLEQCFVQRSPSKML----TTLRNNSSTFPSLRKNAMIARKSTADSLSSPKRQSVPSTP 664
Query: 272 RKALECRI 279
+ +L R+
Sbjct: 665 KASLSPRV 672
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 32.7 bits (71), Expect = 0.067
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 53 DLAERKRIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLC 112
D+++ K ++ IR A +S S + + DTT+ ++ T S+ T SIS+
Sbjct: 319 DVSDEKETEAKHEIRAPAIIVRETSSHPSTAVPSENDTTESENDTLSESSTTSISSSP-S 377
Query: 113 ENDESIKKGRSVKVPITSTLISDN 136
EN ++ V P +L++DN
Sbjct: 378 ENSDTSDDLTKVDSP-NKSLVNDN 400
>SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 752
Score = 32.3 bits (70), Expect = 0.088
Identities = 32/183 (17%), Positives = 69/183 (37%), Gaps = 15/183 (8%)
Query: 24 KYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERYTIRLKAADQNVNTSVG--- 80
K+N + GD E+ +++ E K + + K + V++ V
Sbjct: 574 KHNSQNFASPMQTDAEGDIVQNEEEKESVEVEEGKHKNDLPKVSPKPPTEGVDSEVNGES 633
Query: 81 ----SKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDN 136
+K + + +D T + S+ PS + + L +ND+ + + I S IS+
Sbjct: 634 LVQVNKVLKSEDDNTSEASKDPSSHVKSPENIEKLKQNDDHFEVTEEITSTINSK-ISEK 692
Query: 137 DRTRIYKVVRFINRKPQKGSIQIDLTSRAKKTSKYTETERREAKRPPEIASGVDKKPDIK 196
+ + + + P+ + ++K S+ T+ R+ + P K+P
Sbjct: 693 QENNVAETILEVTSSPKS-------SENSQKQSEITKKRGRDEEDEPSDLHSSPKRPKTG 745
Query: 197 NSG 199
G
Sbjct: 746 EDG 748
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 30.3 bits (65), Expect = 0.36
Identities = 21/103 (20%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Query: 7 TKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERYTI 66
T+T+ + D+ + DK + D+ +T+ + +S + K++ D E +E T
Sbjct: 454 TETDVKAKETDSIEANDKDEKTDSKETEDKVEETESKEADVKAKETDSIEVDD-KEEKTD 512
Query: 67 RLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAK 109
+ AD+ T +D K+ ++ K+D++ + K
Sbjct: 513 SKETADKVEQTDSKDTNEKPAKDDNKEANEKAEKVDSKDVKEK 555
Score = 29.9 bits (64), Expect = 0.47
Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 5 NNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAE-RKRIRE 62
++ + + E D+K+ DK + D+ T P + D+ + EK+ +D + +++I E
Sbjct: 500 DSIEVDDKEEKTDSKETADKVEQTDSKDTNEKPAKDDNKEANEKAEKVDSKDVKEKIEE 558
>SPAC3C7.13c |||glucose-6-phosphate 1-dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 473
Score = 29.5 bits (63), Expect = 0.62
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 116 ESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGSIQIDLTSRAKKTSKYTETE 175
E + K STL DNDR + V ++ +KG + I R K + +++ +
Sbjct: 297 EGVPKDSKATTFAASTLHVDNDRWKGVPFVFVSGKRMKKGEVYIKYYFRLKDSGIFSDVK 356
Query: 176 RR 177
RR
Sbjct: 357 RR 358
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 29.5 bits (63), Expect = 0.62
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Query: 66 IRLKAADQNVN--TSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIKKGRS 123
+R + D+NVN TS+ S + + T T S T+ + + N E S
Sbjct: 588 LRTHSLDENVNSPTSISSPSSKSSPFTKTTSKDTKSATTTDERPSDFIRLNSEESVGTSS 647
Query: 124 VKVPITSTLISDNDRTRIYKVVRFINRKPQKGSIQID 160
++ T++ I ND + + I+R Q S+ D
Sbjct: 648 LRTSQTTSTIVSNDSSSTASIPSQISRISQVNSLLND 684
>SPBC19C2.11c |||mitochondrial outer membrane protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 29.5 bits (63), Expect = 0.62
Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 57 RKRIRERYTIRL-KAADQNVNTS---VGSKTISTCEDTTKDKSQTPSKIDT 103
R+R+++R+ I++ +A++++ ++S VGSK + E TP+KI T
Sbjct: 347 RERVKKRHVIKIHEASNKSASSSETFVGSKNVDLTESAFDSIPDTPTKIIT 397
>SPAC1420.01c ||SPAC56E4.08c|DUF1752 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 28.3 bits (60), Expect = 1.4
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 77 TSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDN 136
+ +GS + +T K+KS+ P+K +++++A + E K + P ST I
Sbjct: 254 SDLGSLSTNTSSTAQKNKSRKPTKSFSDAVAAASRAKELEKEKLSKVTVTPDDSTSIIRG 313
Query: 137 DRTRIYKV-VRFINRKPQKGSIQIDLTSRAKK 167
R+ + + ++ + + S+Q D + + K
Sbjct: 314 FDPRLPVLSTKNVSHEEKSHSVQDDKSKQLLK 345
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 28.3 bits (60), Expect = 1.4
Identities = 39/156 (25%), Positives = 58/156 (37%), Gaps = 9/156 (5%)
Query: 2 STRNNTKTEKSNESGDTKKIIDKYNR----DDAVQTKYL-PDRGDSSDKREKSRILDLAE 56
ST + +N S + K++R DDA T L P R +K K LA
Sbjct: 240 STGGSETGGAANSSSTSNPSSAKWSRFTVYDDASHTHQLRPAR--RQEKLGKMLKDFLAG 297
Query: 57 RKRIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDE 116
+ RE I +AAD S+ I+ + P+K+ + G C+ E
Sbjct: 298 NSKKREEERIAKEAADAQHQLSLVQSWINGYGQEKLADKKDPAKVSASFVEKYGRCQ--E 355
Query: 117 SIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKP 152
I +G V I + N + V+ RKP
Sbjct: 356 VIGRGAFGVVRIAHKVDPQNSGSETLYAVKEFRRKP 391
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.9 bits (59), Expect = 1.9
Identities = 22/99 (22%), Positives = 38/99 (38%)
Query: 76 NTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISD 135
++S S + S+ ++ S + S + S S+ + S S VPITS+ S
Sbjct: 158 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSS 217
Query: 136 NDRTRIYKVVRFINRKPQKGSIQIDLTSRAKKTSKYTET 174
+ + + +P S I S + S T T
Sbjct: 218 HSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVT 256
>SPCC1682.03c |mug174||meiotically upregulated gene
Mug174|Schizosaccharomyces pombe|chr 3|||Manual
Length = 626
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 97 TPSKIDTESISAKGLCENDES-IKKGRSVKVPITSTLISDN 136
+PSK+ +E+ CEN E ++G++ P++ ++ S+N
Sbjct: 369 SPSKLSSETTKVHRGCENTEKPSEEGKNFTTPLSDSVESEN 409
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 27.9 bits (59), Expect = 1.9
Identities = 17/73 (23%), Positives = 33/73 (45%)
Query: 153 QKGSIQIDLTSRAKKTSKYTETERREAKRPPEIASGVDKKPDIKNSGSRRRFRRKQVASP 212
QK + + + ++AK + + + E+ PE++ +D I + R +
Sbjct: 182 QKETARDEKITKAKIALQASRAKSTESTSSPELSHSLDSSKSIASDMPIHRASHTTGYAA 241
Query: 213 ASLRKASFSPPTE 225
ASL SF+P T+
Sbjct: 242 ASLTSTSFTPVTK 254
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 27.5 bits (58), Expect = 2.5
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Query: 38 DRGDSSDKREKSRILDL--AERKRIRERYTIRLKAADQNVNTSVGSKTISTC-EDTTKDK 94
D DS R++S+ +D A K+ ++ + N V + S+ ED
Sbjct: 1314 DSSDSGKSRKRSQSVDSEDAGSKKPVKKIAASASGRGRKTNKPVATTIFSSDDEDDLLPS 1373
Query: 95 SQTPSKIDTESISAKGLCENDESIKK 120
S PS I + SAK + S+KK
Sbjct: 1374 SLKPSTITSTKASAKNKGKKASSVKK 1399
>SPAC1486.03c |||RNA-binding splicing factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 797
Score = 27.5 bits (58), Expect = 2.5
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 172 TETERREAKRPPEIASGVDKKPDIKNSGSRRRFRRKQVASPASLRK--ASFSPPTEVAKW 229
TE +R+EA EI+ D+K +K R + ++K + S + K S++ P +A
Sbjct: 163 TEKQRKEAIARGEISDSEDEKHTVKQKPLREK-KKKPLKSSEEISKDMGSYNLPRFLASL 221
Query: 230 APTCLNRETK 239
LN +TK
Sbjct: 222 IDASLN-DTK 230
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 27.5 bits (58), Expect = 2.5
Identities = 31/159 (19%), Positives = 62/159 (38%), Gaps = 6/159 (3%)
Query: 46 REKSRILDLAERKRIRERYTIRLKAADQNVNTSVGS--KTISTCEDTTKDKSQTPSKIDT 103
R K++I ++ R + +L+ +N+N + + KT + T+ K T +
Sbjct: 1673 RSKAKISVYEKKTRDLQNKITQLEETIENLNKQLSNPEKTDESTSSVTETKPVTSKPTAS 1732
Query: 104 ESISAKGLCENDESIKK--GRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGSIQIDL 161
++ + E + ++ G+S+ + T + V R + KP G + I
Sbjct: 1733 KADVGQNATEASSAKREPSGKSLSARLQGT--GKQKGVQRPAVSRPVPMKPDSGKLSITG 1790
Query: 162 TSRAKKTSKYTETERREAKRPPEIASGVDKKPDIKNSGS 200
S+ TSK +E + S ++ D GS
Sbjct: 1791 ASKRIATSKNAAQNAKELSSTAKSGSLKRQRDDANKGGS 1829
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/54 (22%), Positives = 27/54 (50%)
Query: 159 IDLTSRAKKTSKYTETERREAKRPPEIASGVDKKPDIKNSGSRRRFRRKQVASP 212
++ S +++ + +E+E A E+ S KK +K ++ +++ ASP
Sbjct: 147 VETVSGDEESEEESESEDNSASEEDELDSAPAKKAQVKKKRTKDESEQEEAASP 200
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 26.6 bits (56), Expect = 4.4
Identities = 35/154 (22%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 56 ERKRIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCEND 115
ER++ +ER +R K S G T+++ E +++ TP++ D+ SAKG +
Sbjct: 184 EREK-KEREKLRKKQQQAKKKGSTGEDTLASSEVSSEVDISTPAENDS---SAKGK-QAA 238
Query: 116 ESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGSIQIDLTSRAKKTSKYTETE 175
S +KG +V + L R + +R + + ++ A+K + +
Sbjct: 239 GSKRKGPNV-TALQKMLEEKRAREEEEQRIREEEARIAEEEKRLAEVEEARKEEARLKKK 297
Query: 176 RREAKRPPEI-ASG--VDKKPDIKNSGSRRRFRR 206
+E K+ E+ A G + KK + + ++RR ++
Sbjct: 298 EKERKKKEEMKAQGKYLSKKQKEQQALAQRRLQQ 331
>SPBC25B2.05 |mis3||rRNA processing protein Mis3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 327
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 73 QNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIKKGRSVK 125
+NV +K T E T +Q PSK+D E S + + +E +K R+ K
Sbjct: 243 RNVARRKPAKIRETKEYTPFPPAQPPSKLDLEIESGEYFLKKEEKERKKRAEK 295
>SPAC8F11.04 |||U3 snoRNP-associated protein Cic1/Utp30 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 373
Score = 26.6 bits (56), Expect = 4.4
Identities = 10/56 (17%), Positives = 29/56 (51%)
Query: 55 AERKRIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKG 110
++++ + ++ + +K + ++ +KT + ED+ K++ K+ S+ A G
Sbjct: 302 SKQQNVSDKKQVTVKEVPKKLSVKNAAKTTNRDEDSKGKKAKASPKVSQSSLKANG 357
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 26.2 bits (55), Expect = 5.8
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 1 MSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRI 60
M+ ++TKT ++ +T++ I K + ++ Q R + +K+EK RIL L E+K
Sbjct: 17 MAEFHSTKTSH-DQFEETEEEIKKRSPEELKQAIEAL-REKAKEKKEKERILALEEKK-- 72
Query: 61 RERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQ 96
Y I K+ D+ + + D K + Q
Sbjct: 73 -TNYKILQKSNDETAQAMRKMQDQARLRDLQKIRQQ 107
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 25.8 bits (54), Expect = 7.7
Identities = 13/63 (20%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 44 DKREKSRILDLAERKRIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDT 103
+++ K R+L +++ K R+ YT + D+ ++ ++ +++ + TT + TP++ T
Sbjct: 462 EQQNKKRLLLVSQEKE-RKGYTSA--SPDRPLSQTITESSVAKTKSTTPKSTDTPTEATT 518
Query: 104 ESI 106
+
Sbjct: 519 SPV 521
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 25.8 bits (54), Expect = 7.7
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 148 INRKPQKGSIQIDLTSR--AKKTSKYTETERREAKRPPEIASGVDKKPDIKNSGSRRRFR 205
+N+K +K +++ R A++ + E +E + PE+ S D DIK SR+
Sbjct: 9 LNKKMEKIEVEMAEFERLGAEREKEAVERIVQEENQNPEVPSNDDASTDIK---SRKEGN 65
Query: 206 RKQVASPASLRKASF 220
K A L +F
Sbjct: 66 MKVTAEEIGLETENF 80
>SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 233
Score = 25.8 bits (54), Expect = 7.7
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Query: 34 KYLPDRGDSSDKREKSRILDLAERKRIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKD 93
K L R DK KS+ L+ E+K ++ + KAAD+ + K ++ D K
Sbjct: 11 KSLEYRSKKFDK--KSQSLEEHEKKVQQKNEELEKKAADKISRDELPEKQLAQSNDKDKH 68
Query: 94 KSQTPSKIDTESISAKGLCENDESI 118
P +S KG ND +
Sbjct: 69 SVSNPPHKTLKSKRQKGK-NNDRKV 92
>SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 285
Score = 25.8 bits (54), Expect = 7.7
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 110 GLCENDESIKKGRSVKVPITSTLIS----DNDRTRIYKVVRFINRKPQKGSIQIDLTSRA 165
GL + + I+K R V TL+ + + V++ NR+ SI+ + R
Sbjct: 125 GLGKGGQQIQKARQVYEKAVETLVQLASYQSAFVLLGDVLQMTNRRVN--SIEHIIIPRL 182
Query: 166 KKTSKYTETERREAKR 181
+ T KY E+E E +R
Sbjct: 183 ENTIKYIESELEELER 198
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.127 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,372,750
Number of Sequences: 5004
Number of extensions: 56675
Number of successful extensions: 189
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 173
Number of HSP's gapped (non-prelim): 29
length of query: 303
length of database: 2,362,478
effective HSP length: 72
effective length of query: 231
effective length of database: 2,002,190
effective search space: 462505890
effective search space used: 462505890
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 54 (25.8 bits)
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