Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001757-TA|BGIBMGA001757-PA|undefined
(303 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28770.1 68416.m03591 expressed protein 40 0.002
At2g22795.1 68415.m02704 expressed protein 36 0.025
At3g60110.1 68416.m06712 DNA-binding bromodomain-containing prot... 34 0.14
At2g26920.1 68415.m03229 ubiquitin-associated (UBA)/TS-N domain-... 34 0.14
At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing ... 33 0.18
At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing ... 33 0.24
At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)... 33 0.31
At4g21660.1 68417.m03138 proline-rich spliceosome-associated (PS... 32 0.55
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 31 0.72
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 31 0.72
At4g02650.1 68417.m00360 epsin N-terminal homology (ENTH) domain... 31 0.72
At1g50750.1 68414.m05707 expressed protein 31 0.72
At3g53540.1 68416.m05912 expressed protein 31 1.3
At3g29210.1 68416.m03664 hypothetical protein similar to At1g328... 31 1.3
At3g14590.1 68416.m01847 C2 domain-containing protein low simila... 31 1.3
At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small GTP... 30 1.7
At1g67230.1 68414.m07652 expressed protein 30 1.7
At2g23320.2 68415.m02784 WRKY family transcription factor identi... 30 2.2
At2g23320.1 68415.m02785 WRKY family transcription factor identi... 30 2.2
At1g67680.1 68414.m07723 expressed protein 30 2.2
At5g55820.1 68418.m06956 expressed protein 29 2.9
At5g39380.1 68418.m04771 calmodulin-binding protein-related has ... 29 2.9
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 29 2.9
At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70... 29 2.9
At4g02720.1 68417.m00368 expressed protein temporary automated f... 29 2.9
At1g56660.1 68414.m06516 expressed protein 29 2.9
At3g29790.1 68416.m03787 hypothetical protein 29 3.8
At2g26580.2 68415.m03189 plant-specific transcription factor YAB... 29 3.8
At2g26580.1 68415.m03188 plant-specific transcription factor YAB... 29 3.8
At1g31970.1 68414.m03931 DEAD/DEAH box helicase, putative simila... 29 3.8
At4g28760.2 68417.m04113 expressed protein predicted protein. Ar... 29 5.1
At4g28760.1 68417.m04112 expressed protein predicted protein. Ar... 29 5.1
At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH) domain... 29 5.1
At1g59850.1 68414.m06741 expressed protein 29 5.1
At5g16630.1 68418.m01947 DNA repair protein Rad4 family low simi... 28 6.7
At4g26450.1 68417.m03805 expressed protein 28 6.7
At3g15960.1 68416.m02018 DNA mismatch repair MutS family protein... 28 6.7
At3g03680.1 68416.m00371 C2 domain-containing protein contains I... 28 6.7
At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains... 28 6.7
At5g63550.1 68418.m07976 expressed protein 28 8.9
At5g17910.1 68418.m02100 expressed protein 28 8.9
At5g04670.1 68418.m00475 expressed protein BRL protein, Homo sap... 28 8.9
At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEME... 28 8.9
At4g32610.1 68417.m04643 mitochondrial glycoprotein family prote... 28 8.9
At3g48710.1 68416.m05319 expressed protein putative protein - Ar... 28 8.9
At2g43500.1 68415.m05405 RWP-RK domain-containing protein low si... 28 8.9
At2g34300.1 68415.m04196 dehydration-responsive protein-related ... 28 8.9
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 39.9 bits (89), Expect = 0.002
Identities = 62/286 (21%), Positives = 118/286 (41%), Gaps = 22/286 (7%)
Query: 4 RNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRER 63
+ +K KS E+ D KK+ NRD+A + D+ + +E+S+ E K
Sbjct: 790 KKESKDAKSVETKDNKKLSSTENRDEAKER----SGEDNKEDKEESKDYQSVEAKE---- 841
Query: 64 YTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAK--GLCENDE-SIKK 120
K + V+T+VG+K S +D D+S ES+ K + ND+ S K+
Sbjct: 842 -----KNENGGVDTNVGNKEDS--KDLKDDRSVEVKANKEESMKKKREEVQRNDKSSTKE 894
Query: 121 GRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGSIQIDLTSRAKKTSKYTETERREAK 180
R + + + + YK + ++ K + + + +K+ K + +++E+K
Sbjct: 895 VRDFANNMDIDVQKGSGESVKYK--KDEKKEGNKEENKDTINTSSKQKGKDKKKKKKESK 952
Query: 181 RPPEIASGVDKKPDIKNSGSRRRFRRKQV--ASPASLRKASFSPPTEVAKWAPTCLNRET 238
DKK + N ++ +K+ + + L++ + + NRE
Sbjct: 953 NSNMKKKEEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASKNREK 1012
Query: 239 KPYYEAWVNTKLAAVSRGCDLNDRERTRLMETFRKALECRIDSPEL 284
K Y E TK A D++R RK+ + + +S +L
Sbjct: 1013 KEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDL 1058
Score = 37.9 bits (84), Expect = 0.008
Identities = 42/210 (20%), Positives = 85/210 (40%), Gaps = 13/210 (6%)
Query: 7 TKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERY-- 64
TK +K +E+ +KK DK +D K D+ + K E+S+ E K+ E+
Sbjct: 1067 TKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKK-KHEESKSRKKEEDKKDMEKLED 1125
Query: 65 -TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCEN--DESIKKG 121
K D+N + E K+K + K +T+ I + +N D+ KK
Sbjct: 1126 QNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKKEKKS 1185
Query: 122 RSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGSIQIDLTSRAKKTSKYTETERREAKR 181
+ + +++ ++ K N + +K ++ + K+T K + + K
Sbjct: 1186 SKDQQKKKEKEMKESEEKKLKK-----NEEDRKKQTSVEENKKQKETKKEKNKPKDDKKN 1240
Query: 182 PPEIASGVDKKPDIKNSGSRRRFRRKQVAS 211
+ + G KK +++ ++K A+
Sbjct: 1241 TTKQSGG--KKESMESESKEAENQQKSQAT 1268
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 36.3 bits (80), Expect = 0.025
Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 11/156 (7%)
Query: 2 STRNNTKTEKSNESGDTKKIIDKYNR-----DDAVQTKYLPDRGDSSDKREKSRILDLAE 56
S N T+T++ ES ++ +K N + A Q + + +K E + + E
Sbjct: 558 SKENETETKEKEESSSQEETKEKENEKIEKEESAPQEETKEKENEKIEKEESASQEETKE 617
Query: 57 RK-RIRERYTIRLKAADQNVNTSVGSK-----TISTCEDTTKDKSQTPSKIDTESISAKG 110
++ +E+ + +NVNT K ++ T + S+ S DTE ++
Sbjct: 618 KETETKEKEESSSNESQENVNTESEKKEQVEENEKKTDEDTSESSKENSVSDTEQKQSEE 677
Query: 111 LCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVR 146
E +ES K G + S SD + + K VR
Sbjct: 678 TSEKEESNKNGETEVTQEQSDSSSDTNLPQEVKDVR 713
>At3g60110.1 68416.m06712 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 438
Score = 33.9 bits (74), Expect = 0.14
Identities = 36/178 (20%), Positives = 78/178 (43%), Gaps = 6/178 (3%)
Query: 42 SSDKREKSRILDLAERKRIRERYTIRLKAADQ-NVNTSVGSKTISTCEDTTKDKSQTPSK 100
SS ++++ + +++E K + T +++ + + +V +K T K QT +K
Sbjct: 241 SSRQKDEKKSQEVSEEKIVTTTATTSARSSRRTSKEIAVVAKDTKTGRAKNNIKKQTDTK 300
Query: 101 IDTESISAKGLCENDESIKKGRSVKVPITSTLIS--DNDRTRIYKVVRFINRKPQKGSIQ 158
++ EN ++ KK + K + + + + K N+K G+++
Sbjct: 301 TESSDDDDDEKEENSKTEKKTVADKKKSVADFLKRIKKNSPQKGKETTSKNQKKNDGNVK 360
Query: 159 IDLTSRAKKTSKYTETERREAKRPPEIASGVDKKP-DIKNSGSRRRFRRKQVASPASL 215
+ KK+ + E + K P E+ S KK +++N+ S+ +RKQ A +
Sbjct: 361 KE-NDHQKKSDGNVKKENSKVK-PRELRSSTGKKKVEVENNNSKSSSKRKQTKETAEV 416
>At2g26920.1 68415.m03229 ubiquitin-associated (UBA)/TS-N
domain-containing protein contains Pfam profile PF00627:
UBA/TS-N domain
Length = 646
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 101 IDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGSIQID 160
I+++S+S G C + K ++ +P+ +I D + KV + RK Q+ +
Sbjct: 82 IESDSVSNNGSCSGESEDHKEKTTNLPLKQEVIPGADNDKREKVRQKNERKHQRQK-ERR 140
Query: 161 LTSRAKKTSKYTETERREAKRPPEIASGVDKK 192
+K S Y + + EA+ +A G+ ++
Sbjct: 141 AQELNEKCSTYLISRKLEARTQQIVAMGISQE 172
>At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing
protein
Length = 987
Score = 33.5 bits (73), Expect = 0.18
Identities = 45/224 (20%), Positives = 87/224 (38%), Gaps = 9/224 (4%)
Query: 2 STRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIR 61
S R+ + + K +SG + + RD + + + R S R + + R
Sbjct: 590 SRRSRSVSPKKRKSGQEDSELSRLRRDSSSRGEKKSSRAGSRSPRRRKEVKS-TPRDDEE 648
Query: 62 ERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIKKG 121
+ R ++ ++V S K S E+ K ++ S+ + + N + K+
Sbjct: 649 NKVKRRTRSRSRSVEDSADIKDKSRDEELKHHKKRSRSRSREDRSKTRDTSRNSDEAKQK 708
Query: 122 RSVKVPITSTLISDNDRTRIYKVVR---FINRKPQKGSIQIDLTSRAKKTSKYTETERRE 178
+ + +L +DN V + +R ++ S +D K+ + + E
Sbjct: 709 HRQR-SRSRSLENDNGSHENVDVAQDNDLNSRHSKRRSKSLDEDYDMKERRGRSRSRSLE 767
Query: 179 AKRPPEIASGVDKKPDIKNSGS-RRRFRRKQVASPASLRKASFS 221
K +S +K + +N+GS RRR R K V S K + S
Sbjct: 768 TKNR---SSRKNKLDEDRNTGSRRRRSRSKSVEGKRSYNKETRS 808
>At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 382
Score = 33.1 bits (72), Expect = 0.24
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 38 DRGDSSDKREKSR--ILDLAER-KRIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKDK 94
++ + +++E+ R +LA R K+I +++ + K ++ + SK E+ K
Sbjct: 11 EKKEKKERKERKRREAEELAVREKKISKKHKSKSKEEEKPEKSKKKSKKYEEVEEEEKSP 70
Query: 95 SQTPSKIDTESISAKGLCENDES--IKKGRSVKVPITSTLISDND 137
S +PS ++ K +DES I + V VPI T+ SD+D
Sbjct: 71 SPSPSPKKSKESKKKHKRSSDESEEIVDSKPVTVPIV-TIESDSD 114
>At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746592
Length = 718
Score = 32.7 bits (71), Expect = 0.31
Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 3/119 (2%)
Query: 76 NTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISD 135
N S+GS + + Q K D ++ + +D+ K + + + STL D
Sbjct: 522 NKSIGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSASDKGTGKKQDITITGASTLPKD 581
Query: 136 NDRTRIYKVVRFINRKPQKGSIQIDLTSRAKKTSKYTETERRE--AKRPPEIASGVDKK 192
T + + RF +K ID ++A TE + +E K P + V+ K
Sbjct: 582 EVDTMVQEAERFAKEDKEKRD-AIDTKNQADSVVYQTEKQLKELGEKIPGPVKEKVEAK 639
>At4g21660.1 68417.m03138 proline-rich spliceosome-associated (PSP)
family protein similar to SP|Q13435 Splicing factor 3B
subunit 2 (Spliceosome associated protein 145) (SAP 145)
(SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa
subunit) {Homo sapiens}; contains Pfam profiles PF04046:
PSP, PF04037: Domain of unknown function (DUF382)
Length = 584
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 2 STRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIR 61
S + TK E + KK+ + DD Q ++G S+ K++ R + +AE K++
Sbjct: 113 SEEDGTKDESEEKEDVKKKVNSDSDSDDDEQDNQNKEKGISNKKKKLQRRMKIAELKQVS 172
Query: 62 ER 63
R
Sbjct: 173 AR 174
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 31.5 bits (68), Expect = 0.72
Identities = 21/116 (18%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Query: 1 MSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRI 60
++ +T T+K NE ++ + + RD + Q K L R +S++++ K +L +
Sbjct: 543 LAESKDTLTQKENELSSFVEVHEAHKRDSSSQVKELEARVESAEEQVKELNQNLNSSE-- 600
Query: 61 RERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDE 116
E+ + + ++ ++ TI ++ + ++ D E S + + E +
Sbjct: 601 EEKKILSQQISEMSIKIKRAESTIQELSSESERLKGSHAEKDNELFSLRDIHETHQ 656
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 31.5 bits (68), Expect = 0.72
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 3/106 (2%)
Query: 5 NNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSR---ILDLAERKRIR 61
N + K+ G + + + D+V+ K L GDSS+ + R + D I+
Sbjct: 104 NGLTSSKTGPKGSGDASMRQKEKQDSVEQKPLKKGGDSSETSSRGRHDKLDDKGGAGGIK 163
Query: 62 ERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESIS 107
++ AD + TS SK + T E T ++ +TE+ S
Sbjct: 164 SGKSLPKAKADMSNETSSSSKYMETSESLTGTMNKMSLIGETENSS 209
>At4g02650.1 68417.m00360 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related contains Pfam PF01417: ENTH domain. ENTH
(Epsin N-terminal homology) domain; similar to Chain A,
Calm-N N-Terminal Domain Of Clathrin Assembly Lymphoid
Myeloid Leukaemia Protein, Pi(4,5)p2 Complex
(GP:13399999) {Homo sapiens}; supporting cDNA
gi|26451912|dbj|AK118440.1|
Length = 611
Score = 31.5 bits (68), Expect = 0.72
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 90 TTKDKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDRTRIYK-VVRFI 148
TTK S+ +K + E + + EN E + +++ P + ++ K V +
Sbjct: 337 TTKSSSKRSNKSEEEESKTEYIQENQEDLNSIKALPAPEQKEEEEEEEKMETKKDVEEVV 396
Query: 149 NRKPQKGSIQIDLTSRAKKTS 169
+R+ Q+G + +DLT A T+
Sbjct: 397 SRQDQEGDL-LDLTDEAGVTA 416
>At1g50750.1 68414.m05707 expressed protein
Length = 816
Score = 31.5 bits (68), Expect = 0.72
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 4 RNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDS------SDKR----EKSRILD 53
+ ++K + +NES +T K D+ + +K R D S+KR +++R
Sbjct: 371 QTSSKDKDANESAETLKARDRKSLGADTSSKMNRTRKDEMNITDDSNKRRNYNKQARDKR 430
Query: 54 LAERKRIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCE 113
L K+ RE+ +K A +N N GSK T+KD + D K + E
Sbjct: 431 LKYMKQAREKRLQYIKQARKNGNNESGSKV----NRTSKDGMKIAEDFDKRRKYMKRVRE 486
Query: 114 NDES 117
N+ES
Sbjct: 487 NNES 490
>At3g53540.1 68416.m05912 expressed protein
Length = 924
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 81 SKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISD 135
+K T D K + PSK D E + L D+ GR ++V +T LI++
Sbjct: 863 NKIQETLRDLVTRKDEKPSKYDVEEKELQWLSLEDDIEIIGREIEVMLTDELITE 917
>At3g29210.1 68416.m03664 hypothetical protein similar to At1g32840,
At4g04010, At2g06430, At2g15140, At2g04980, At2g14130,
At3g44500, At2g15190, At3g47260, At5g34900, At2g02210,
At3g32900
Length = 594
Score = 30.7 bits (66), Expect = 1.3
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 11/104 (10%)
Query: 72 DQNVNTSVGSKTISTCEDTTKDKSQTP--SKIDTESISAKGL-CENDES-IKKGRSVKVP 127
D+N VG + E+++KDKS TP S + +S + L + D+ +++GR+
Sbjct: 429 DENAQRDVG---VEVAEESSKDKSPTPRSSTPNFNILSEESLDVQKDKKRVRRGRNENKR 485
Query: 128 I-TSTLISDNDRTRIYKVVRFINRKPQKGSIQIDLTSRAKKTSK 170
+ S DN +TR +V R R+ Q S +D+ +R + +K
Sbjct: 486 VKPSVHAEDNLKTR-KQVPR--KRQKQVDSADVDVPTRKEAQNK 526
>At3g14590.1 68416.m01847 C2 domain-containing protein low
similarity to SP|Q16974 Calcium-dependent protein kinase
C (EC 2.7.1.-) {Aplysia californica}; contains Pfam
profile PF00168: C2 domain
Length = 737
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 42 SSDKREKSRILDLAERKRIR-ERYTIRLKAADQNVNTSVGSKTISTCEDTTKD 93
S DK S + DL +R + E T++ D NVNTS SK S ++T K+
Sbjct: 653 SDDKSAFSNVQDLGTLRRAKLEGKTVKA-GEDDNVNTSANSKDDSKNKETKKN 704
>At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small
GTP-binding protein, putative identical to SP:P28187
Ras-related protein ARA-4 {Arabidopsis thaliana}
Length = 214
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 84 ISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDRTRIYK 143
++T DTT K +K D ESI A + E +S+ + + TS L S N +T
Sbjct: 110 LNTHSDTTVAKMLIGNKCDLESIRAVSV-EEGKSLAESEGLFFMETSALDSTNVKTAFEM 168
Query: 144 VVRFI 148
V+R I
Sbjct: 169 VIREI 173
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 30.3 bits (65), Expect = 1.7
Identities = 32/164 (19%), Positives = 72/164 (43%), Gaps = 6/164 (3%)
Query: 34 KYLPDRGDSSDKREKSRILDLAERKRIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKD 93
K DR + SDK K + +L E ++ + + +K + +V++ + + E
Sbjct: 254 KQREDRANESDKIIKQKGKELEEAQKKIDAANLAVKKLEDDVSSRIKDLALREQETDVLK 313
Query: 94 KSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQ 153
KS I+T++ + L E E+ +K +V+ + + R +++ RK
Sbjct: 314 KS-----IETKARELQALQEKLEAREK-MAVQQLVDEHQAKLDSTQREFELEMEQKRKSI 367
Query: 154 KGSIQIDLTSRAKKTSKYTETERREAKRPPEIASGVDKKPDIKN 197
S++ + K+ +++ E + AKR + ++K + +N
Sbjct: 368 DDSLKSKVAEVEKREAEWKHMEEKVAKREQALDRKLEKHKEKEN 411
>At2g23320.2 68415.m02784 WRKY family transcription factor identical
to WRKY DNA-binding protein 15 GI:13506742 from
[Arabidopsis thaliana]
Length = 262
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 61 RERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIKK 120
R T + Q+++T+V S + ST + T K + S S + C IK+
Sbjct: 164 RPSETAPFASQTQSLSTTVSSFSKSTKRKCNSENLLT-GKCASASSSGRCHCSKKRKIKQ 222
Query: 121 GRSVKVPITSTLISD 135
R ++VP S +SD
Sbjct: 223 RRIIRVPAISAKMSD 237
>At2g23320.1 68415.m02785 WRKY family transcription factor identical
to WRKY DNA-binding protein 15 GI:13506742 from
[Arabidopsis thaliana]
Length = 317
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 61 RERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIKK 120
R T + Q+++T+V S + ST + T K + S S + C IK+
Sbjct: 164 RPSETAPFASQTQSLSTTVSSFSKSTKRKCNSENLLT-GKCASASSSGRCHCSKKRKIKQ 222
Query: 121 GRSVKVPITSTLISD 135
R ++VP S +SD
Sbjct: 223 RRIIRVPAISAKMSD 237
>At1g67680.1 68414.m07723 expressed protein
Length = 664
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 175 ERREAKRPPEIASGVDKKPDIKNSGSRRRFRRKQVASPASLRKASFSPPTEVAKWAPTCL 234
E+ +P E A+ + ++K ++R+ +RK P A+ PP + +W P
Sbjct: 545 EKTYGAKPIEGAAASSSQEEVKKEKAKRKRKRKP-KYPKGFDPANPGPPPDPERWLP--- 600
Query: 235 NRETKPYYEAWVNTKLAAVSRG 256
R + Y+ K AA RG
Sbjct: 601 -RRERSSYKPKRKDKRAAQIRG 621
>At5g55820.1 68418.m06956 expressed protein
Length = 1826
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/132 (20%), Positives = 57/132 (43%), Gaps = 4/132 (3%)
Query: 11 KSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERYTIRLKA 70
K E KK D+ ++ + K ++ ++R++ ++A+RKR RE RLK
Sbjct: 1559 KKQEIEKKKKEEDRKKKEAEMAWKQEMEKKKKEEERKRKEF-EMADRKRQREEEDKRLKE 1617
Query: 71 ADQNVNTSVGSKTISTCEDTTK-DKSQTPSKIDTESISAKGLCENDESIKKGRSV--KVP 127
A + + + ++ + +K +D + K L E+ + +K R ++P
Sbjct: 1618 AKKRQRIADFQRQQREADEKLQAEKELKRQAMDARIKAQKELKEDQNNAEKTRQANSRIP 1677
Query: 128 ITSTLISDNDRT 139
+ + +D T
Sbjct: 1678 AVRSKSNSSDDT 1689
>At5g39380.1 68418.m04771 calmodulin-binding protein-related has
weak similarity to calmodulin-binding proteins
Length = 507
Score = 29.5 bits (63), Expect = 2.9
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 16/178 (8%)
Query: 46 REKSRILDLAERKRIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTES 105
R S+ + R + R ++RL A ++ S K S+ + ++Q P ++
Sbjct: 234 RVASKKAPVTPRASLSPRLSVRL-AGSSSLRKSQSLKAASS----SSRQNQKPRPVNRTD 288
Query: 106 ISAKGLCENDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGSIQIDLTSRA 165
K L + K V++ T+ ++S+ND+ + V F+ P S D
Sbjct: 289 EFNKQLDDYPVEEKTLHVVEMETTNNVVSENDQNQQGFVEPFLPPLPPTQSTPKDDECTV 348
Query: 166 KKTSKYTETE-RREAKRPPEI--ASGVDKKP-------DIKNSGSRR-RFRRKQVASP 212
+T +Y T EA+ E S +KKP D + +R+ RFRR + P
Sbjct: 349 SETEEYEYTSGSNEAESEEEEIGLSNGEKKPRAARKEGDSADEAARKLRFRRGTIVDP 406
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 1 MSTRNNTKTEKSNESGDTKKIIDKYNRDDAVQT--KYLPDRGDSSDKREKSRILDLAERK 58
M ++N + KS E D KK ID+ + V T K + +++ ++E+ + ER
Sbjct: 288 MKEQDNNQANKSEEEEDVKKKIDENETPEKVDTESKEVESVEETTQEKEEEVKEEGKERV 347
Query: 59 RIRERYTIRLKAADQ 73
E+ ++K DQ
Sbjct: 348 EEEEKEKEKVKEDDQ 362
Score = 28.7 bits (61), Expect = 5.1
Identities = 31/144 (21%), Positives = 60/144 (41%), Gaps = 8/144 (5%)
Query: 56 ERKRIRERYTIRLKAADQNVNTSVGSKTISTCEDTTK--DKSQTPSKIDTESISAKGLCE 113
E K I+ I K + + + ED K D+++TP K+DTES + + E
Sbjct: 271 EEKLIKNEDDIEEKTEEMKEQDNNQANKSEEEEDVKKKIDENETPEKVDTESKEVESVEE 330
Query: 114 NDESIKKGRSVKVPITSTLISDNDRTRIYKVVRFINRKPQKGSIQIDLTSRAKKTSKYTE 173
+ +K VK + + ++ + + V+ ++K + + + ++ K E
Sbjct: 331 TTQ--EKEEEVKEE-GKERVEEEEKEK--EKVKEDDQKEKVEEEEKEKVKGDEEKEKVKE 385
Query: 174 TERREAKRPPEIASGVDKKPDIKN 197
E E K+ E+ G + P N
Sbjct: 386 EESAEGKK-KEVVKGKKESPSAYN 408
>At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein 70
[Arabidopsis thaliana] GI:6746592; similar to heat shock
70 protein - Spinacia oleracea,PID:g2654208
Length = 718
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 3/119 (2%)
Query: 76 NTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISD 135
N S+GS + + Q K D ++ + D+ K + + + STL D
Sbjct: 522 NKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSAVDKGTGKKQDITITGASTLPKD 581
Query: 136 NDRTRIYKVVRFINRKPQKGSIQIDLTSRAKKTSKYTETERRE--AKRPPEIASGVDKK 192
+ + RF +K ID ++A TE + +E K P E+ V+ K
Sbjct: 582 EVDQMVQEAERFAKDDKEKRD-AIDTKNQADSVVYQTEKQLKELGEKIPGEVKEKVEAK 639
>At4g02720.1 68417.m00368 expressed protein temporary automated
functional assignment
Length = 422
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 39 RGDSSDKREKSRILDLAERKRIRER---YTIRLKAADQNVNTSVGSKTISTCEDTTKDKS 95
R SS KR+KSR +KR R Y+ +++D++ + + + EDT
Sbjct: 152 RRKSSSKRKKSRSSRSFRKKRSHRRKTKYSDSDESSDEDSKAEISASSSGEEEDTKSKSK 211
Query: 96 QTPSKIDTESISAKG 110
+ D+ S +KG
Sbjct: 212 RRKKSSDSSSKRSKG 226
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 29.5 bits (63), Expect = 2.9
Identities = 39/213 (18%), Positives = 87/213 (40%), Gaps = 15/213 (7%)
Query: 10 EKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKRE---KSRILDLAERKRIRERYTI 66
EK + KK D+ + + K +G+ +K + K++ D E++ E
Sbjct: 262 EKKKKPDKEKKEKDESTEKEDKKLKGKKGKGEKPEKEDEGKKTKEHDATEQEMDDEAADH 321
Query: 67 RLKAADQNVNTSVGSKTI--STCEDTTKDKS--QTPSKIDTESISAKGLCENDESIKKGR 122
+ +N + + +T+ CE TKDK + +K K + ++ +K+ +
Sbjct: 322 KEGKKKKNKDKAKKKETVIDEVCEKETKDKDDDEGETKQKKNKKKEKKSEKGEKDVKEDK 381
Query: 123 SVKVPITSTLISDN---DRTRIYKVVRFINRKPQKGSIQIDLTSRAKKTSKYTE--TERR 177
+ P+ + ++S + + K + +K ++ + KK K + +++
Sbjct: 382 KKENPLETEVMSRDIKLEEPEAEKKEEDDTEEKKKSKVEGGESEEGKKKKKKDKKKNKKK 441
Query: 178 EAKRPPEIASGVDKKPD---IKNSGSRRRFRRK 207
+ K P +KK D +K GS+ + +K
Sbjct: 442 DTKEPKMTEDEEEKKDDSKDVKIEGSKAKEEKK 474
>At3g29790.1 68416.m03787 hypothetical protein
Length = 144
Score = 29.1 bits (62), Expect = 3.8
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 192 KPDIKNSGSRRRFRRKQVASPASLRK-ASFSPPTEVAKWAPTCLNRETKPYYEAWVNTKL 250
KP K S R+ +RK+ + L++ F+ P V KW T L R + +N K+
Sbjct: 62 KPKRKGSSIFRKPKRKEETTTIILQENLQFATPILVPKWLQTRLLRLLSDDIKPSLNNKV 121
Query: 251 AAVSRGCDLNDRERTR 266
A S ++D RTR
Sbjct: 122 AKWS---PISDELRTR 134
>At2g26580.2 68415.m03189 plant-specific transcription factor YABBY
family protein contains Pfam profile: PF04690 YABBY
protein
Length = 164
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 152 PQKGSIQIDLTSRAKKTSKYTETERREAKRPPEIASGVDKKPDIKNSGSRRRFRRKQVAS 211
P+ GS T + S T TE+R RPPE V P N + +R + +
Sbjct: 71 PEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQRV---PSAYNQFIKEEIQRIKANN 127
Query: 212 PASLRKASFSPPTEVAKWA 230
P + +FS T WA
Sbjct: 128 PDISHREAFS--TAAKNWA 144
>At2g26580.1 68415.m03188 plant-specific transcription factor YABBY
family protein contains Pfam profile: PF04690 YABBY
protein
Length = 164
Score = 29.1 bits (62), Expect = 3.8
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 152 PQKGSIQIDLTSRAKKTSKYTETERREAKRPPEIASGVDKKPDIKNSGSRRRFRRKQVAS 211
P+ GS T + S T TE+R RPPE V P N + +R + +
Sbjct: 71 PEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQRV---PSAYNQFIKEEIQRIKANN 127
Query: 212 PASLRKASFSPPTEVAKWA 230
P + +FS T WA
Sbjct: 128 PDISHREAFS--TAAKNWA 144
>At1g31970.1 68414.m03931 DEAD/DEAH box helicase, putative similar
to p68 RNA helicase [Schizosaccharomyces pombe]
GI:173419
Length = 537
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/65 (23%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 156 SIQIDLTSRAKKTSK---YTETERREAKRPPEIASGVDKKPDIKNSGSRRRFRRKQVASP 212
+++ +T++ KK SK +TE + P E+ +GV++ ++ N +++ +R++ S
Sbjct: 16 AVESPMTNKKKKKSKKNKHTEENHEVEEVPQEVTNGVEE--ELSNKEKKKKRKREEKESE 73
Query: 213 ASLRK 217
+ +K
Sbjct: 74 KNKKK 78
>At4g28760.2 68417.m04113 expressed protein predicted protein.
Arabidopsis thaliana
Length = 924
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 165 AKKTSKYTETERREAKRPPEIASGVDKKPDIKNSGSRRRFRRKQVASPASLRKASFSPPT 224
A++ SK E ++ ++ G++ P + +R + + S +SL + S
Sbjct: 96 AREMSKEVEHKQSPTNVVAKLM-GLETLPQTHQETATQRSKSRS-NSHSSLNHSMTSTDN 153
Query: 225 EVAKWAPTCLNRETKPYYEAWVNTKLAAVSRGC 257
EV K+ +RE K YE W + + + SR C
Sbjct: 154 EVQKYQD--FSREFKDVYETWQSPQKVSRSRDC 184
>At4g28760.1 68417.m04112 expressed protein predicted protein.
Arabidopsis thaliana
Length = 924
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 165 AKKTSKYTETERREAKRPPEIASGVDKKPDIKNSGSRRRFRRKQVASPASLRKASFSPPT 224
A++ SK E ++ ++ G++ P + +R + + S +SL + S
Sbjct: 96 AREMSKEVEHKQSPTNVVAKLM-GLETLPQTHQETATQRSKSRS-NSHSSLNHSMTSTDN 153
Query: 225 EVAKWAPTCLNRETKPYYEAWVNTKLAAVSRGC 257
EV K+ +RE K YE W + + + SR C
Sbjct: 154 EVQKYQD--FSREFKDVYETWQSPQKVSRSRDC 184
>At4g25940.1 68417.m03731 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Chain B, Crystal Structure Of N-Terminal Domain Of
Drosophila Ap180 (GP:13399617) [Drosophila
melanogaster]; supporting cDNA
gi|20465326|gb|AY096427.1|
Length = 601
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 147 FINRKPQKGSIQIDLTSRAKKTSKYTETERREAKRPPEIASGVDKK 192
+I PQ GS+Q L + K+ + E E + +P E A ++K
Sbjct: 313 YIKEAPQSGSVQKKLEYQEKEEEEQEEEEAEHSVQPEEPAEADNQK 358
>At1g59850.1 68414.m06741 expressed protein
Length = 498
Score = 28.7 bits (61), Expect = 5.1
Identities = 23/103 (22%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 68 LKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIKKGRSVKVP 127
LK D+N+NT + SK+ D+ TP ++ E++ +K + + S + V P
Sbjct: 327 LKGKDRNLNTPLSSKSNDV---EPLDRGDTPKDVEQEAVVSKE--KRNRSTLGAKRVLFP 381
Query: 128 ITSTLISDNDRTRIYKVVRFINRKPQKGSIQIDLTSRAKKTSK 170
+ +N + +VV+ + + K +S+AK ++
Sbjct: 382 AKMHKVKENGSNK-SQVVQSSDEESPKTDSGSSSSSQAKSNAE 423
>At5g16630.1 68418.m01947 DNA repair protein Rad4 family low
similarity to SP|Q01831 DNA-repair protein complementing
XP-C cells (Xeroderma pigmentosum group C complementing
protein) {Homo sapiens}; contains Pfam profile PF03835:
DNA repair protein Rad4
Length = 865
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/53 (22%), Positives = 28/53 (52%)
Query: 91 TKDKSQTPSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDRTRIYK 143
T+++ + ++ + AK L N E++ K ++VK P + +++R+ K
Sbjct: 772 TRERLKNRYANNSNDVEAKSLEVNSETVVKAKNVKAPEKQRVAKRGEKSRVRK 824
>At4g26450.1 68417.m03805 expressed protein
Length = 1248
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 11 KSNESGDTKKIIDKYNRDDAVQTK 34
K +GD++ ++DKYN D Q+K
Sbjct: 220 KCEGAGDSESVLDKYNLQDEAQSK 243
>At3g15960.1 68416.m02018 DNA mismatch repair MutS family protein
contains Pfam profile PF05188: MutS domain II
Length = 474
Score = 28.3 bits (60), Expect = 6.7
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Query: 2 STRNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDK--REKSRILDLAERKR 59
S+ NTK S E+ + +DK+ +AV ++ + S D+ R+ ILD + KR
Sbjct: 60 SSEQNTKLSMSEENQEDSFDVDKFIESEAVSSREELGQSSSMDEVNRDLEAILD-SLNKR 118
Query: 60 IRERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIK 119
++ + + + I + T+K KS+ + ++ + ES +
Sbjct: 119 DGSDDISKVGESMDAAGIAAAATNIVVEDGTSKRKSKVEETQEVVKFESESSSASSESRR 178
Query: 120 KGRS 123
+ S
Sbjct: 179 QSSS 182
>At3g03680.1 68416.m00371 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1017
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 163 SRAKKTSKYTETERREAKRPPEIASGVDKKPD 194
+ A KT + E +++E ++P E A +KKPD
Sbjct: 171 TEAAKTEEKKEGDKKEEEKPKEEAKPDEKKPD 202
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 98 PSKIDTESISAKGLCENDESIKKGRSVKVPITSTLISDNDRTRIY 142
P + T + G + DES K+GR V+V +S D RIY
Sbjct: 666 PCTVLTIGVFDNGRYKRDESGKQGRDVRVGKIRVRLSTLDMNRIY 710
>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 1340
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/125 (19%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Query: 4 RNNTKTEKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRER 63
R + + + D ++ ++ D + + + RE+ RIL+ E++R ER
Sbjct: 356 REEERRREDQRARDKEREREREREHDRERERQRERERQRARDRERERILERREKERQGER 415
Query: 64 YTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISA---KGLCENDESIKK 120
R +A + + + ++ +T +D TK+++ P I ++ S+ + + SI++
Sbjct: 416 ERERKRALEIKRDRTPTAR--ATSKD-TKERTPVPKSISRDARSSSLRRDAHHREASIRR 472
Query: 121 GRSVK 125
+K
Sbjct: 473 SSPIK 477
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 153 QKGSIQIDLTSRAKKTSKYTETERREAKRPPEIASGVDKKPDIKNSGSRRRFRRKQVASP 212
+K ++++ S+ K +SK T E +K G DK+P K S KQ+A
Sbjct: 327 EKDEVEVEKPSKKKSSSKKTVEESSGSK-------GKDKQPSAKGSARSGEKSSKQIAKS 379
Query: 213 AS 214
S
Sbjct: 380 TS 381
>At5g17910.1 68418.m02100 expressed protein
Length = 1342
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 190 DKKPDIKNSGSRRRFRRKQVASPASLRKASFS 221
++KPD+K G + F +Q P R SFS
Sbjct: 458 EEKPDLKGDGFQEEFSSQQPKDPMFRRHESFS 489
>At5g04670.1 68418.m00475 expressed protein BRL protein, Homo
sapiens, EMBL:AF005067
Length = 766
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 42 SSDKREKSRILDLAERKRIRERYTIRLKAADQNVNTSVGSKTISTCEDTTKDKSQTP 98
SS+K +K + +R+++R K D+ K CE ++ D+S+ P
Sbjct: 82 SSEKEDKVDDFPVTKRRKVRNEGVGDEKTVDKMFGIVYSRKRKRLCEPSSSDRSEEP 138
>At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEMETER
protein [Arabidopsis thaliana] GI:21743571; contains
Pfam profile PF00730: HhH-GPD superfamily base excision
DNA repair protein
Length = 1729
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/53 (22%), Positives = 25/53 (47%)
Query: 150 RKPQKGSIQIDLTSRAKKTSKYTETERREAKRPPEIASGVDKKPDIKNSGSRR 202
RKP+K + Q + S+ ++K + K+P + +K P++ R+
Sbjct: 77 RKPRKAATQEKVKSKETGSAKKKNLKESATKKPANVGDMSNKSPEVTLKSCRK 129
>At4g32610.1 68417.m04643 mitochondrial glycoprotein family protein
/ MAM33 family protein low similarity to SP|P40513
Mitochondrial acidic protein MAM33, mitochondrial
precursor {Saccharomyces cerevisiae}; contains Pfam
profile PF02330: Mitochondrial glycoprotein
Length = 557
Score = 27.9 bits (59), Expect = 8.9
Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Query: 28 DDAVQTKYLPDRGDSSDKREKSRILDLAERKRI---RERYTIRLKAADQNVNTSVGSKTI 84
D V TK + DS DK EK + D E+K + + + K D+ +
Sbjct: 180 DFGVATKDENGQQDSQDKGEKKEVNDEGEKKENTTGESKASKKKKKKDKQKELKESQSEV 239
Query: 85 STCEDTTKDKSQTPSKIDTESISAKGLCENDESIKKGRSVK 125
+ D + ++ + + SI K + S+KK +S K
Sbjct: 240 KSNSDAASESAE--QEESSSSIDVKERLKKIASMKKKKSSK 278
>At3g48710.1 68416.m05319 expressed protein putative protein -
Arabidopsis thaliana, EMBL:AL078465.1
Length = 462
Score = 27.9 bits (59), Expect = 8.9
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
Query: 10 EKSNESGDTKKIIDKYNRDDAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERYTIRLK 69
E++N+S DT+ +K D A + D+ S KR K E K I+ K
Sbjct: 276 EENNKSEDTETEDEK---DKAKEKTKSTDKKRLS-KRTKKEKPAAEEEKSIKGSAKSSRK 331
Query: 70 AADQ-NVNTSVGSKTISTCEDTTKDKSQTPSKIDTESISAKGLCENDESIKKGR 122
+ Q + +T+ SK +D D S+ K T AKG + +S KKG+
Sbjct: 332 SFRQVDKSTTSSSKKQKVDKD---DSSKEKGKTQTSKPQAKGSKDQGQSRKKGK 382
>At2g43500.1 68415.m05405 RWP-RK domain-containing protein low
similarity to nodule inception protein [Lotus japonicus]
GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
Length = 947
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 1 MSTRNNTKTEKSN--ESGDTKKIIDKYNRDDAVQTKYLPDRG 40
M N +T SN ESG T I+ R+D V+ K+ P G
Sbjct: 827 MEDWNQMRTHNSNSSESGSTTLIVKASYREDTVRFKFEPSVG 868
>At2g34300.1 68415.m04196 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 27.9 bits (59), Expect = 8.9
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 6 NTKTEKSNESGDTKKIIDKYNRD-DAVQTKYLPDRGDSSDKREKSRILDLAERKRIRERY 64
N + + E+G+ +K D N D D + K + + G SD+ + E+ ++ E
Sbjct: 107 NESSGEKTEAGEERKESDDNNGDGDGEKEKNVKEVGSESDETTQK------EKTQLEES- 159
Query: 65 TIRLKAADQNVNTSVGSKTISTCEDTTKDKSQ 96
T K+ D N N + S E++T+ S+
Sbjct: 160 TEENKSEDGNGNEEKAEENASETEESTEKSSK 191
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.311 0.127 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,072,868
Number of Sequences: 28952
Number of extensions: 292998
Number of successful extensions: 1003
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 967
Number of HSP's gapped (non-prelim): 67
length of query: 303
length of database: 12,070,560
effective HSP length: 81
effective length of query: 222
effective length of database: 9,725,448
effective search space: 2159049456
effective search space used: 2159049456
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -