Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001756-TA|BGIBMGA001756-PA|undefined
         (202 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   0.73 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   6.8  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.2 bits (50), Expect = 0.73
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 152 HNLLRAEWDKSLGELRDMKAAVSDDEEMD 180
           +N+L   W K L  ++D K + SD++ +D
Sbjct: 205 NNILENLWAKKLIVVKDKKKSRSDEQTID 233


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/21 (33%), Positives = 14/21 (66%)

Query: 123 NIMEALTNYRDKETSLRHFEM 143
           ++M++  N+R   T+ R FE+
Sbjct: 284 DVMKSFVNFRPSFTAARFFEI 304


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.129    0.351 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,993
Number of Sequences: 317
Number of extensions: 1131
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 202
length of database: 114,650
effective HSP length: 54
effective length of query: 148
effective length of database: 97,532
effective search space: 14434736
effective search space used: 14434736
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 41 (20.6 bits)