Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001756-TA|BGIBMGA001756-PA|undefined
(202 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 29 0.63
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 28 0.84
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 27 1.5
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 27 1.9
SPCC895.04c |ufe1||SNARE Ufe1|Schizosaccharomyces pombe|chr 3|||... 27 2.6
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 26 3.4
SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein Vps33|S... 26 3.4
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 25 5.9
SPAC688.08 |srb8|med12|mediator complex subunit Srb8 |Schizosacc... 25 5.9
SPAC7D4.11c |sec39||secretory pathway protein Sec39 |Schizosacch... 25 5.9
SPCC74.09 |mug24||RNA-binding protein, rrm type|Schizosaccharomy... 25 5.9
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 25 5.9
SPAC4A8.04 |isp6|prb1|vacuolar serine protease Isp6|Schizosaccha... 25 7.8
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 25 7.8
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 25 7.8
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 28.7 bits (61), Expect = 0.63
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 113 LDAEMLTRKQNIMEALTNYR---DKETSLRHFEMILQEKQYEHNLLRAE-WDKSLG 164
LDA ML RKQ + E L +YR + LR EM + KQ +N + W+ LG
Sbjct: 98 LDA-MLKRKQKLSEELDHYRAIISSKRELRAQEMEAKRKQDSYNNPELKFWEDYLG 152
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 28.3 bits (60), Expect = 0.84
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 134 KETSLRHFEMILQEKQYEHNLLRAEWDKSLGELRDMKAAVSD-DEEMDT 181
K T R + +LQEK+ E + +A D+SL +L ++ +D D+ MDT
Sbjct: 616 KSTENR-YRQLLQEKEEELEIQKAAVDESLLQLSKLQLDRNDIDQAMDT 663
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 27.5 bits (58), Expect = 1.5
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 87 LLEKVTVKCVAQTHAVKKLITTPDRALDAEMLTRKQNIMEALTNYRDKETSLRHFEMILQ 146
L+ K +K + + ++++ + DR LD+++ T +NI T+ K T+L LQ
Sbjct: 275 LILKEKIKKI-EDERMRQMSVSSDRTLDSQLQTVNENITRISTSIELKNTALEEEHGDLQ 333
Query: 147 E 147
+
Sbjct: 334 Q 334
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 27.1 bits (57), Expect = 1.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 1 MSAFKTLKEVSQNFEQELKQLSNVLFSAKIGETFEDAV 38
++ F T + NFE E + SN A+I +F D++
Sbjct: 49 LNFFSTQNVMQMNFEDEYSEFSNEDDEAEIDNSFADSI 86
>SPCC895.04c |ufe1||SNARE Ufe1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 319
Score = 26.6 bits (56), Expect = 2.6
Identities = 14/65 (21%), Positives = 32/65 (49%)
Query: 111 RALDAEMLTRKQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKSLGELRDMK 170
R + ++ LT+ + + E + LQE + E+++L E++ ++ LRD
Sbjct: 183 RNIASDFLTKNPTDENSAVEIPESELQTFFTQQQLQELEQENDVLLQEFEHTMERLRDTG 242
Query: 171 AAVSD 175
+++D
Sbjct: 243 KSLAD 247
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 26.2 bits (55), Expect = 3.4
Identities = 15/67 (22%), Positives = 31/67 (46%)
Query: 112 ALDAEMLTRKQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKSLGELRDMKA 171
+L++E+ K + DK+ + H+E +++EKQ + L E + +++
Sbjct: 713 SLESEISLLKDKYTVVSRSVEDKKKEIGHYESLIKEKQPHLSELEMELRNFVKSRDELQI 772
Query: 172 AVSDDEE 178
V EE
Sbjct: 773 QVEKVEE 779
>SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein
Vps33|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 26.2 bits (55), Expect = 3.4
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 88 LEKVTVKCVAQTHAVKKLITTPDRALDAEMLTRKQNIMEALTNYRDKETSLRHFEMILQE 147
+EK T+ T+ KL+ T R +ML + ++ TS FE +LQE
Sbjct: 64 IEKKTIYLCRPTYENAKLVATHVRQFQRDMLRIESTVIVL-------PTSNILFETVLQE 116
Query: 148 KQYEHNLLRAEW 159
+ LL EW
Sbjct: 117 EGVFGELLVTEW 128
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 25.4 bits (53), Expect = 5.9
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Query: 103 KKLITTPDRALDAEMLTRKQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWD-- 160
KK I + L E RK+ +ME ++KE +R E ++ + L + + D
Sbjct: 120 KKRIEAERQRLKDEEERRKKELMEK--EKKEKER-IRLIEEQKHKENEQRRLKQEQIDAK 176
Query: 161 KSLGELRD--MKAAVSDDEEMDTNSAYYVL 188
+ E R+ MK DD E D+N A+ ++
Sbjct: 177 RKEEEAREKRMKETFKDDPEEDSNMAWSII 206
>SPAC688.08 |srb8|med12|mediator complex subunit Srb8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1233
Score = 25.4 bits (53), Expect = 5.9
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 88 LEKVTVKCVAQTHAVKKLITTPDRALDAEMLTRKQNIMEALTNYRDKETSLRHFEMILQE 147
L+ + + TH +K + T ++ ++ + N+++ + K+ S HF L +
Sbjct: 280 LQFFSTSLIQYTHICRKCVITILQSYQQLIVDQPANLLKF--SLLSKKVS--HFLFTLAQ 335
Query: 148 KQYEHNLLRAEWDK 161
K E EWDK
Sbjct: 336 KNIESFFFPTEWDK 349
>SPAC7D4.11c |sec39||secretory pathway protein Sec39
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 769
Score = 25.4 bits (53), Expect = 5.9
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 4 FKTLKEVS-QNFEQELKQLSNVLFSA 28
FKT +S NF+ ++K L NVL +A
Sbjct: 355 FKTSVSISCSNFDSQIKYLENVLLNA 380
>SPCC74.09 |mug24||RNA-binding protein, rrm type|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 654
Score = 25.4 bits (53), Expect = 5.9
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 66 ITEQVKTEE---IIKEYGDVAAIKLLEKVTVKCVAQTH 100
I++ + TEE I+++YG++ +IK L+ + VA T+
Sbjct: 507 ISDSLTTEELELILRQYGEIESIKYLKNRSSGFVAYTN 544
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.4 bits (53), Expect = 5.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 113 LDAEMLTRKQNIMEALTNYRDKETSLRHFEMIL 145
LD +T+K N++ L R K +L H IL
Sbjct: 124 LDINSVTQKSNLLNELKQVRSKLAALEHENGIL 156
>SPAC4A8.04 |isp6|prb1|vacuolar serine protease
Isp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 25.0 bits (52), Expect = 7.8
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 140 HFEMILQEKQYEHNL-LRAEWDKSLGELRDMKAAVSDDEEMDTNSAYYVLVLLDLY 194
H+ ++LQ E W + E+ M A +DE DT+ + Y+ L +Y
Sbjct: 85 HYIIVLQPDLSEQEFQAHTNW---VSEMHQMDIASQEDEYYDTSDSNYMFGLKHVY 137
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 25.0 bits (52), Expect = 7.8
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 100 HAVKKLITTPDRALDAEMLTRKQNIMEALTNYRDKETSLRHFEMILQE-KQYEHNLLRAE 158
H V+ L+ D+ +D L+ + + A TN H++ +Q KQ N+L
Sbjct: 248 HPVRSLLNLIDKFIDK--LSEQSGNVTADTN--------EHYDRAMQYLKQLVENILNRS 297
Query: 159 WDKSLGELRDMKAAVSDDEEM 179
D + L+ ++ +DEE+
Sbjct: 298 LDNLIDTLKQVQHDAENDEEL 318
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.0 bits (52), Expect = 7.8
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 123 NIMEALTNYRDKETSLRHFEMILQEK--QYEHNL 154
N++++ TNY + T L LQEK Y++NL
Sbjct: 507 NVLDSCTNYVGRYTFLNELFEYLQEKTTYYKNNL 540
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.129 0.351
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 761,587
Number of Sequences: 5004
Number of extensions: 25443
Number of successful extensions: 104
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 97
Number of HSP's gapped (non-prelim): 17
length of query: 202
length of database: 2,362,478
effective HSP length: 69
effective length of query: 133
effective length of database: 2,017,202
effective search space: 268287866
effective search space used: 268287866
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 52 (25.0 bits)
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