Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001756-TA|BGIBMGA001756-PA|undefined
(202 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0033 + 202703-202705,203397-203458,203566-203665,203875-20... 31 0.85
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 31 0.85
03_02_0348 + 7709894-7709926,7710516-7710604,7711202-7711277,771... 29 2.0
11_06_0349 + 22565405-22566279,22567774-22569772,22570360-225704... 29 2.6
08_01_0483 - 4243963-4244019,4244243-4245797,4246335-4246651 29 2.6
03_06_0114 + 31751471-31751785,31751919-31752056,31752183-317522... 29 3.4
09_04_0468 + 17848144-17848174,17849032-17849378,17849505-17849921 28 6.0
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708... 28 6.0
05_04_0111 - 18079051-18079970,18080384-18080462 28 6.0
05_01_0008 + 60498-60552,60644-60864,60956-61013,61271-61443,615... 28 6.0
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 28 6.0
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 27 7.9
10_08_0304 - 16640937-16642877 27 7.9
08_02_0008 + 11212351-11214506,11214548-11214584 27 7.9
03_06_0656 - 35330109-35331011,35331154-35331360,35331455-353316... 27 7.9
03_02_0971 - 12807981-12808094,12808949-12809053,12809236-128092... 27 7.9
>02_01_0033 +
202703-202705,203397-203458,203566-203665,203875-203916,
204264-204305,204437-204589,206559-207221
Length = 354
Score = 30.7 bits (66), Expect = 0.85
Identities = 21/86 (24%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 86 KLLEKVTVKCVAQTHAVKKLITTPDRALDAEMLTRKQNIMEALTNYRDKETSLRHFEMIL 145
KLL + C Q +++L +++L + +++ +M+ + R+KE +L M+L
Sbjct: 23 KLLGEGLGSCSVQE--LQELEVQLEKSLCSIRQKKQKMLMDQILELREKEMNLLKENMVL 80
Query: 146 QEKQYEHNLLRAEWDKSLGELRDMKA 171
++ + L + W S+GEL++ +A
Sbjct: 81 RD---QCKALSSPWSTSVGELKNKQA 103
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 30.7 bits (66), Expect = 0.85
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 105 LITTPDRALDAEMLT--RKQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKS 162
L++ PD L E L +KQ +++ T R + R E L+EKQ E L +
Sbjct: 377 LVSVPDETLTPEQLKEKKKQILLKTTTEGRMRAKQRRAEEEALREKQEEERRLENP-ELY 435
Query: 163 LGELRDMKAAVSD 175
L ELR + +SD
Sbjct: 436 LEELRARYSELSD 448
>03_02_0348 +
7709894-7709926,7710516-7710604,7711202-7711277,
7712019-7712214,7712449-7712832,7712884-7714804,
7714906-7714966,7715952-7716371
Length = 1059
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 104 KLITTPDRALDAEMLTRKQNIMEALTNYRDKETSLRHFE 142
K++ + L AE+ +QN E +T YRD E + +E
Sbjct: 864 KVLQSKIEVLTAELDDERQNHQEDITRYRDLEEKIERYE 902
>11_06_0349 +
22565405-22566279,22567774-22569772,22570360-22570478,
22570835-22571117
Length = 1091
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 97 AQTHAVKKLITTPDRALDAEMLTRKQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLR 156
A + AVK L T +L A+ T + + + D+ S++ F L+ + +H+ R
Sbjct: 7 ASSEAVKSL-TGKLGSLLAQEYTLIAGVRDDIQYINDELASMQAFLSKLKRRDVDHDEQR 65
Query: 157 AEWDKSLGELR-DMKAAVSD 175
+W K + E+ D+K V D
Sbjct: 66 QDWMKQVREVAYDIKDCVDD 85
>08_01_0483 - 4243963-4244019,4244243-4245797,4246335-4246651
Length = 642
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 87 LLEKVTVKCVAQT--HAVKKLITTPD---RALDAEMLTRKQNIMEALTNYRDKETSLRHF 141
L + V +K VA+ + +K TT D A D ++ +++ + D+E+ ++++
Sbjct: 85 LTKPVELKIVAKEFENGLKYSGTTDDLETEASDRNIIDNRRHSVSEFMEKLDQESEIKYY 144
Query: 142 EMILQEKQYEH-NLLRAEWDK 161
E L+E E+ N ++ EW K
Sbjct: 145 ENKLKEINEEYNNSMKCEWPK 165
>03_06_0114 +
31751471-31751785,31751919-31752056,31752183-31752291,
31756033-31756598
Length = 375
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 115 AEMLTRKQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKSLGELRDM 169
AE +R + +++L + T E +KQ +H LLR ++ SLG+LR +
Sbjct: 173 AEFFSRVETQLDSLAESNCEGTGSSEEEQDPSDKQLKHQLLR-KYGGSLGDLRQV 226
>09_04_0468 + 17848144-17848174,17849032-17849378,17849505-17849921
Length = 264
Score = 27.9 bits (59), Expect = 6.0
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 151 EHNLLRAEWDKSLGELRDMKAAVSDDE 177
+H+ LR + D L E++++KA + D+E
Sbjct: 112 DHDALRRDKDALLAEIKELKAKLGDEE 138
>07_03_1647 +
28370226-28370369,28370452-28370611,28370704-28370831,
28372512-28372628,28372729-28372782,28372985-28373075,
28373517-28373688,28374452-28374573,28374726-28374817,
28375331-28375373,28375596-28375656,28376367-28376515,
28376659-28376729,28376805-28376975,28377056-28377124,
28377427-28377528,28377629-28377697,28378060-28378138,
28378238-28378337,28378438-28378513,28378715-28378894,
28379430-28379552,28379634-28379717,28380068-28380252,
28380339-28380477,28380585-28380644,28380926-28381030,
28381332-28381445
Length = 1019
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 2 SAFKTLKEVSQNFEQELKQLSNVLFSAKIGETFED 36
S K+LK+V+ E E + L +V+ +IG TFED
Sbjct: 684 STKKSLKDVTTENEFEKRLLGDVIPPDEIGVTFED 718
>05_04_0111 - 18079051-18079970,18080384-18080462
Length = 332
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/51 (23%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 112 ALDAEMLTRKQNIMEALTNYRDKETSLRHFEMILQEKQYEH-NLLRAEWDK 161
A D ++ ++++ + D+E+ ++++E L+E E+ N ++ EW K
Sbjct: 156 ASDRNIIDKRRHSISEFMEKLDQESEIKYYENKLKEINEEYNNSMKCEWPK 206
>05_01_0008 +
60498-60552,60644-60864,60956-61013,61271-61443,
61528-61711,61823-61993,62483-62514,62596-62638,
62768-62835,63561-63605,63695-64162
Length = 505
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 65 QITEQVKTEEIIKEYGDVAAIKLLEKVTVKCVAQTHAVKKLITTPDRALDAEMLTRKQNI 124
QI ++ E +A+ + K + +A KK++ T +ALD++ K ++
Sbjct: 194 QIKSKIDEETAEAVKASASAVSAIAKTNQELLASKDEEKKILVTLTQALDSQAKELK-SL 252
Query: 125 MEALTNYRD 133
E+L + RD
Sbjct: 253 CESLNHSRD 261
>03_01_0423 +
3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 129 TNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKSLGELR 167
+N+ KE +L E + + Q + NL++ + ++GEL+
Sbjct: 645 SNHMHKEAALHALENLHSQSQEDFNLVKLNLENTVGELK 683
>12_02_1035 -
25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 27.5 bits (58), Expect = 7.9
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 62 LTPQITEQVKTEEIIKEYGDVAAIKLLEKVTVKCVAQTHAVKKLITTPDRALDAEMLTRK 121
LT I ++ + +YG + +KL V V+ + H +K L+ T DA+ + +
Sbjct: 729 LTEGIGSVMEELHLDDKYGSLDLMKL--DVIVQLIL--HEIKCLLNTIS---DAQDVKQN 781
Query: 122 QNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKSLGELRDMK 170
Q + ++L T L HF + + + E ++LR EW EL ++
Sbjct: 782 QILEKSLV-----VTLLEHFGREVADLRSERSVLRQEWQAKSEELLQLQ 825
>10_08_0304 - 16640937-16642877
Length = 646
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 164 GELRDMKAAVSDDEEMDTNSAYYVLVLLDLYKRE 197
GELR+M+A V+D + + + YVL L + ++
Sbjct: 540 GELREMRARVADRRQYELSGRAYVLAGLSSHAQQ 573
>08_02_0008 + 11212351-11214506,11214548-11214584
Length = 730
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 104 KLITTPD---RALDAEMLTRKQNIMEALTNYRDKETSLRHFEMILQEKQYEH-NLLRAEW 159
K TT D A D ++ +++ + D+E+ ++++E L+E E+ N ++ EW
Sbjct: 280 KTRTTDDLETEASDRNIIDNRRHSVSEFMEKLDQESEIKYYENKLKEINEEYNNSMKCEW 339
Query: 160 DK 161
K
Sbjct: 340 PK 341
>03_06_0656 -
35330109-35331011,35331154-35331360,35331455-35331632,
35331726-35332221,35332889-35333033
Length = 642
Score = 27.5 bits (58), Expect = 7.9
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Query: 57 AKPVSLTPQITEQVKTEEIIKEYGDVAAIKLLEKVTVKCVAQTHAVKKLITTPDRALDAE 116
AKPVS + T V + K+ GD EK V+ A +KL D + +
Sbjct: 203 AKPVSGPEESTGDVAQDNSKKDGGDP------EKKKVRNTLSGSAKRKLKKKHDSKVSGK 256
Query: 117 MLTRKQNIMEALTNYRDKETSLRHFEMILQEKQ 149
++ E L K+ +L +E +L+EK+
Sbjct: 257 T-EKEAEKAEVLKEEERKDMTLEEYEKVLEEKR 288
>03_02_0971 -
12807981-12808094,12808949-12809053,12809236-12809295,
12809399-12809537,12809648-12809832,12809926-12810009,
12810093-12810215,12810617-12810796,12811017-12811092,
12811178-12811277,12811355-12811430,12812155-12812244,
12812342-12812449,12813583-12813651,12813751-12813921,
12814002-12814072,12814263-12814360,12814659-12814719,
12814935-12814971,12815217-12815308,12815428-12815549,
12816281-12816414
Length = 764
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 5 KTLKEVSQNFEQELKQLSNVLFSAKIGETFED 36
K+LK+++ E E + L++V+ +IG TFED
Sbjct: 432 KSLKDIATENEFEKRLLADVIPPDEIGVTFED 463
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.129 0.351
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,388,220
Number of Sequences: 37544
Number of extensions: 139588
Number of successful extensions: 474
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 464
Number of HSP's gapped (non-prelim): 20
length of query: 202
length of database: 14,793,348
effective HSP length: 79
effective length of query: 123
effective length of database: 11,827,372
effective search space: 1454766756
effective search space used: 1454766756
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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