Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001755-TA|BGIBMGA001755-PA|IPR007123|Gelsolin region,
IPR007122|Gelsolin
(353 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 144 7e-35
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 137 1e-32
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 134 1e-31
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 107 1e-23
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299... 84 2e-16
05_02_0126 - 6857200-6857907,6858102-6858554,6858626-6858715,685... 33 0.26
03_05_0225 + 22111269-22111327,22111587-22111638,22112148-221121... 33 0.26
04_03_0658 + 18447986-18448117,18448204-18448317,18448388-184485... 33 0.46
05_03_0459 - 14284513-14286336 32 0.80
03_03_0051 - 14091944-14091949,14092045-14092234,14092328-140924... 32 0.80
03_03_0049 + 14082358-14082613,14084662-14084795,14084883-140849... 32 0.80
05_01_0018 + 125697-126130,126231-126356,126726-126825,126950-12... 31 1.8
04_03_0205 + 12649724-12650191,12651493-12652025,12652114-126522... 31 1.8
04_04_0924 - 29449285-29449290,29449386-29449575,29449669-294497... 30 2.4
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 30 3.2
05_04_0132 + 18303925-18307164 29 5.6
01_01_0841 - 6564029-6564348,6564654-6564686,6564793-6565450,656... 29 7.4
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 144 bits (350), Expect = 7e-35
Identities = 97/288 (33%), Positives = 145/288 (50%), Gaps = 26/288 (9%)
Query: 75 WDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLNYLE 134
+DIH+WIG++S+QDE+G AAI TV LD GG AVQHRE G+ES FLSYF+ + LE
Sbjct: 67 FDIHFWIGKDSSQDEAGTAAIKTVELDTMLGGRAVQHRELQGYESDKFLSYFKPCIIPLE 126
Query: 135 GGNPSGFNHVVTNAGAQKRMFQVKGKRDVRVRQVDPQIASMNKGDVFVLDLDNDIYVFVG 194
GG SGF + R++ KGKR +RV++V +S+N DVF+LD + IY F G
Sbjct: 127 GGFASGFK-TPEEDKFETRLYICKGKRAIRVKEVPFARSSLNHDDVFILDTEKKIYQFNG 185
Query: 195 EKAKNVEKLKAISFANQVRDQDHHGRGRVDIVD--KYSSDVDVQKFFTALGSGVKDLVPD 252
+ E+ KA+ +++ H+G V IVD K ++ D +F+ G +
Sbjct: 186 ANSNIQERAKALEAIQHLKETYHNGVCDVAIVDDGKLQAESDSGEFWVLFGGFAP--IGK 243
Query: 253 ESTGGDDQEFERNEASNVILSEVSDATGKIKVTPLSKPFKQEN----------------- 295
++ DD E L +++ K++ T L+K + N
Sbjct: 244 KAICDDDVVLETTAPK---LYSINNGQLKLEDTVLTKSILENNKCFLVDCGSDLFIWVGR 300
Query: 296 -LSPQEKSQAMTKAQELLNAKNYPSWVQVTRVLQNTEPAAFKQYFFTW 342
+E+ A +E + +N P +VTRV+Q E FK F +W
Sbjct: 301 LTQVEERKAASAAVEEFIATQNRPKTTRVTRVIQGYENHTFKSKFESW 348
Score = 37.9 bits (84), Expect = 0.012
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 79 YWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLNYLEGGNP 138
YWIG++S ++ A + + G + R G E F++ FQ P+ L+GG
Sbjct: 446 YWIGKDSIPEDQEMAFQTANSIWNSLKGRPILGRIYQGKEPPQFIALFQ-PMVILKGGIS 504
Query: 139 SGFNHVVTNAGAQKRMFQVKG 159
SG+ V G + + G
Sbjct: 505 SGYQKFVEEKGLKDETYSGDG 525
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 137 bits (331), Expect = 1e-32
Identities = 94/298 (31%), Positives = 148/298 (49%), Gaps = 20/298 (6%)
Query: 63 IQTTSDNRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALF 122
++TT+ + DIHYW+G++++QDE+G AAI TV LD GG AVQ+RE G+E+ F
Sbjct: 108 LKTTALKNGSFRHDIHYWLGKDTSQDEAGTAAIKTVELDAALGGRAVQYREVQGNETERF 167
Query: 123 LSYFQTPLNYLEGGNPSGFNHVVTNAGAQ-KRMFQVKGKRDVRVRQVDPQIASMNKGDVF 181
LSYF+ + EGG SGF H N R+F +GK V V++V +S+N D+F
Sbjct: 168 LSYFKPCIIPEEGGIASGFRHTEINEREHVTRLFVCRGKHTVHVKEVPFARSSLNHDDIF 227
Query: 182 VLDLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGRVDIVD--KYSSDVDVQKFF 239
+LD + I+ F G + E+ KA+ ++D +H G+ V V+ K +D D +F+
Sbjct: 228 ILDTKSKIFQFNGSNSSIQERAKALEVVQYLKDSNHEGKCDVGSVEDGKLMADADAGEFW 287
Query: 240 TALGSGVKDLVPD--ESTGGDDQEFER-----NEAS------NVILSEVSDATGKIKVTP 286
G G L G D F N+ +V+ E+ D+T +
Sbjct: 288 GLFG-GFAPLPRKTFSDLNGKDSAFSSKLICLNKGQTVPVDFDVLTRELLDSTKCYLLDC 346
Query: 287 LSKPF--KQENLSPQEKSQAMTKAQELLNAKNYPSWVQVTRVLQNTEPAAFKQYFFTW 342
S+ + +E+ +A + A+ELL N P + R+++ E F+ F W
Sbjct: 347 GSEIYVWMGRETPLEERKRAGSAAEELLREVNRPK-SHIVRLMEGFETVIFRSKFSKW 403
Score = 46.0 bits (104), Expect = 5e-05
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 80 WIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLNYLEGGNPS 139
W G++S QDE A + + + AV R G E A F S FQ L +GG +
Sbjct: 499 WFGKKSVQDEKTTAISVASKMVESLKFQAVMVRLYEGKEPAEFFSIFQN-LVIFKGGVST 557
Query: 140 GFNHVVTNAGAQK--------RMFQVKGK--RDVRVRQVDPQIASMNKGDVFVLDLDNDI 189
G+ V+ G + +F+V+G +++ QVD S+N +VL + +
Sbjct: 558 GYKKFVSENGIEDDTYSENGVALFRVQGSGPENMQAIQVDTAATSLNSSYCYVLHDGDTL 617
Query: 190 YVFVGEKAKNVEK 202
+ ++G + ++++
Sbjct: 618 FTWIGNLSSSMDQ 630
Score = 28.3 bits (60), Expect = 9.8
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 179 DVFVLDLDNDIYVFVGEKAKNVEKLKAISFANQVRDQD 216
DVF+LD + ++V+VG++ + +A+S + + D
Sbjct: 710 DVFILDCHSCVFVWVGQRVDTKMRAQALSVGEKFLELD 747
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 134 bits (324), Expect = 1e-31
Identities = 92/292 (31%), Positives = 143/292 (48%), Gaps = 14/292 (4%)
Query: 63 IQTTSDNRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALF 122
++TT+ + D+HYW+G++++QDE+G AAILTV LD GG AVQ+RE G E+
Sbjct: 69 LKTTALKNGSFRHDLHYWLGKDTSQDEAGTAAILTVELDAALGGRAVQYREVQGGETEKL 128
Query: 123 LSYFQTPLNYLEGGNPSGFNHVVTNAGAQ-KRMFQVKGKRDVRVRQVDPQIASMNKGDVF 181
LSYF+ + GG SGFNHV N R++ +GK V V++V +S+N D+F
Sbjct: 129 LSYFRPCIMPQPGGVASGFNHVEVNQQDHVTRLYVCQGKHVVHVKEVPFVRSSLNHEDIF 188
Query: 182 VLDLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGRVDIVD--KYSSDVDVQKFF 239
+LD N I+ F G + E+ KA+ ++D H G+ V V+ K +D + +F+
Sbjct: 189 ILDTANKIFQFNGSNSCIQERAKALEVVQYIKDTFHEGKCEVAAVEDGKLMADTEAGEFW 248
Query: 240 TALGSGVKDLVPDEST--GGDDQE-------FERNEASNVILSEVSDATGKIKVTPLSKP 290
G G L S+ GDD+E F + ++ + + L
Sbjct: 249 GLFG-GFAPLPKKTSSEDNGDDKETVTKLLCFNQGTLEHISFESLEHELLETNKCYLLDC 307
Query: 291 FKQENLSPQEKSQAMTKAQELLNAKNYPSWVQVTRVLQNTEPAAFKQYFFTW 342
+ S Q + A A++LL +N V +V++ E FK F W
Sbjct: 308 GAEIGTSLQVRKGASEAAEKLLIDENRKG-SNVIKVIEGFETIMFKSKFNKW 358
Score = 39.1 bits (87), Expect = 0.005
Identities = 34/157 (21%), Positives = 67/157 (42%), Gaps = 13/157 (8%)
Query: 55 TAGVQIWRIQTTSDNRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRET 114
T I++ T D++ I W G++S +++ +A L + A Q R
Sbjct: 432 TGDCYIFQYTYTGDDKEECL--IGTWFGKKSVEEDRTSAISLASKMFQAAKFQAAQARLY 489
Query: 115 MGHESALFLSYFQTPLNYLEGGNPSGFNHVVTNAGAQK--------RMFQVKGK--RDVR 164
G E F FQ+ L +GG SG+ + + G +F+++G +++
Sbjct: 490 EGKEPIQFFVIFQS-LQVFKGGLSSGYKNFIAVNGTDDDTYVEGGLALFRIQGSGSENMQ 548
Query: 165 VRQVDPQIASMNKGDVFVLDLDNDIYVFVGEKAKNVE 201
QVD +S+N ++L N ++ + G +++
Sbjct: 549 AIQVDAVSSSLNSSYCYILHNGNTVFTWTGNLTTSLD 585
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 107 bits (258), Expect = 1e-23
Identities = 70/203 (34%), Positives = 107/203 (52%), Gaps = 26/203 (12%)
Query: 63 IQTTSDNRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALF 122
++TT+ +L DIHYWIG++++QDESG AAILTV LD GG AVQ+RE G+E+ F
Sbjct: 82 LKTTALKNGSLRHDIHYWIGKDTSQDESGTAAILTVELDAALGGRAVQYREIQGNETDKF 141
Query: 123 LSYFQTPLNYLEGGNPSGFNHVVTNAGAQKRMFQVKGKRDVRVRQVDPQIASMNKGDVFV 182
LSYF+ + GG SGF HV +V +S+N D+F+
Sbjct: 142 LSYFRPCIMPQPGGVASGFKHV----------------------EVPFARSSLNHDDIFI 179
Query: 183 LDLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGRVDIVD--KYSSDVDVQKFFT 240
LD + I+ F G + E+ KA+ ++D H G+ V V+ + +D + +F+
Sbjct: 180 LDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTFHEGKCEVAAVEDGRLMADAEAGEFWG 239
Query: 241 ALGSGVKDLVPDESTGGDDQEFE 263
G G L P + D++++E
Sbjct: 240 FFG-GFAPL-PRRAPVEDNEKYE 260
Score = 39.9 bits (89), Expect = 0.003
Identities = 37/175 (21%), Positives = 73/175 (41%), Gaps = 13/175 (7%)
Query: 38 NARDKAKVHPAFANVGRTAGVQIWRIQTTSDNRNNLSWDIHYWIGRESTQDESGAAAILT 97
N +DK + A + T I++ D++ I W G++S +++ A L
Sbjct: 411 NDKDKILLPSADQSKFYTGDCYIFQYMYPGDDKEECL--IGSWFGKKSIEEDRVTAISLA 468
Query: 98 VGLDDKFGGAAVQHRETMGHESALFLSYFQTPLNYLEGGNPSGFNHVVTNAGAQK----- 152
+ + AVQ R G E F FQ+ +GG SG+ + G
Sbjct: 469 SKMVESAKFQAVQTRLYEGKEPIQFFVIFQS-FQVFKGGLSSGYKKFIAENGIDDDTYLE 527
Query: 153 ---RMFQVKGK--RDVRVRQVDPQIASMNKGDVFVLDLDNDIYVFVGEKAKNVEK 202
+F+++G +++ QVD +S+N ++L N ++ + G ++++
Sbjct: 528 DGLALFRIQGSGPENMQAIQVDAAASSLNSSYSYILHDGNTVFTWTGNLTTSLDQ 582
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 179 DVFVLDLDNDIYVFVGEKAKNVEKLKAISFANQ 211
DVF+LD +DI+V+VG++ +L+A+ +
Sbjct: 652 DVFILDCHSDIFVWVGQQVDVKVRLQALDIGEK 684
>05_01_0383 +
2990812-2990855,2991364-2991463,2991554-2991622,
2991724-2991960,2992045-2992228,2992307-2992442,
2992529-2992691,2992958-2993108,2993154-2993278,
2993349-2993504,2993792-2993860,2993951-2994019,
2994127-2994264,2994626-2994773,2994856-2994866,
2995212-2995352,2995441-2995569,2995860-2995899,
2996020-2996348,2996902-2996919
Length = 818
Score = 83.8 bits (198), Expect = 2e-16
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 5/172 (2%)
Query: 76 DIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLNYLEG 135
++HYW+G E+ +++ A+ + LD G VQ+RET G ES FLSYF+ + ++
Sbjct: 60 NVHYWVGEEAKEEDCLTASDKAIELDVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQ- 118
Query: 136 GNPSGFNHVVTNAGAQKRMFQVKGKRDVRVRQVDPQIASMNKGDVFVLDLDNDIYVFVGE 195
G+ S + + MF+ +G+ RV +V +S++ VFV+D ++ I++F G
Sbjct: 119 GSLSSHMRIYGDKSKDTTMFRCEGEHVARVTEVPFSRSSLDHKAVFVVDTESKIFLFSGC 178
Query: 196 KAKNVEKLKAISFANQVRDQDHHGRGRVDIV----DKYSSDVDVQKFFTALG 243
+ + KA+ +++ H GR + + K D D F+ G
Sbjct: 179 NSSMQTRAKALDVVKHLKENRHCGRCEIATIGTEDGKLVGDSDAGDFWNLFG 230
Score = 34.3 bits (75), Expect = 0.15
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Query: 80 WIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLNYLEGGNPS 139
W G S ++ AAA L G+ D G AV + G E +F F++ L +GG
Sbjct: 448 WSGLNSINEDRVAAASLMSGMIDSVKGHAVVAQVFEGREPEMFFLVFKS-LIIFKGGRSM 506
Query: 140 GFNHVVTNAGAQKRMFQVKGKRDVRVR 166
+ + V+ +Q G RV+
Sbjct: 507 AYKNFVSQRSDANGWYQKNGVALFRVQ 533
>05_02_0126 -
6857200-6857907,6858102-6858554,6858626-6858715,
6858802-6859215,6859357-6859581
Length = 629
Score = 33.5 bits (73), Expect = 0.26
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 90 SGAAAILTVGLD-DKFGGAAVQHRETMGHESALFLSYFQTPLNYLEGGNPSGFNHVVTNA 148
+ A+ +LTV D G H + L + ++ +NY+ G NP G +++V
Sbjct: 354 TSASFLLTVYADFAAISGRGAVHCPAGAAQPFDILKFVKSQVNYILGDNPRGTSYMVGYG 413
Query: 149 GAQKRMFQVKGKRDVRVRQVDPQIASMNKG 178
+ R +G V +++ DP S +G
Sbjct: 414 ASYPRQVHHRGASIVSIKR-DPSFVSCQEG 442
>03_05_0225 +
22111269-22111327,22111587-22111638,22112148-22112151,
22112981-22113114,22113201-22113314,22113386-22113505,
22113587-22113618,22113854-22113866,22114144-22114242,
22114388-22114464,22114733-22114922,22115020-22115025
Length = 299
Score = 33.5 bits (73), Expect = 0.26
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 217 HHGRGRVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEASNVILSEVS 276
H R +VDI + +SD D S V DES+ DQ FE N+ + E
Sbjct: 42 HRKRSKVDISSESNSDNDCSLSSDNHDSDVHLSNHDESSDNHDQHFEENDPLLHLTKE-- 99
Query: 277 DATGKIKVTPLSKPFKQENLSPQEKSQA 304
+ K+K+ +PF ++ + K ++
Sbjct: 100 ELMKKLKIKLGKRPFTDDHKKKRHKVES 127
>04_03_0658 +
18447986-18448117,18448204-18448317,18448388-18448507,
18448589-18449215,18449289-18449462,18449545-18449809,
18449889-18449959,18450043-18450145,18450221-18450280,
18450533-18450744,18450830-18450901,18451446-18451502,
18451598-18451882,18452359-18452371,18452396-18452463,
18452649-18452747,18452836-18452967,18453038-18453141,
18453234-18453423,18453519-18453524
Length = 967
Score = 32.7 bits (71), Expect = 0.46
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 217 HHGRGRVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEASNVILSEVS 276
H R +VDI + +SD D V DES+ DQ FE N+ + E
Sbjct: 3 HRKRSKVDISSESNSDNDCSLSSDNHDGDVHLSNHDESSDNHDQHFEENDPLLHLTKE-- 60
Query: 277 DATGKIKVTPLSKPFKQENLSPQEKSQA 304
+ K+K+ +PF ++ ++K ++
Sbjct: 61 ELMKKLKIKLGKRPFTHDHKKKRQKVES 88
>05_03_0459 - 14284513-14286336
Length = 607
Score = 31.9 bits (69), Expect = 0.80
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 4/93 (4%)
Query: 223 VDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEASNVILSEVSDATGKI 282
+DI S V V KF S D S G ERN+++ S D T
Sbjct: 402 IDICGGIDSPVSVSKFPETPRSSSSDSSSSSSCSGSSSSSERNDSA----SSRPDTTADH 457
Query: 283 KVTPLSKPFKQENLSPQEKSQAMTKAQELLNAK 315
KP +++ L + + T+ QEL+ +
Sbjct: 458 PTEAEVKPMEEQKLIIERAASPHTEMQELITER 490
>03_03_0051 -
14091944-14091949,14092045-14092234,14092328-14092431,
14092503-14092634,14092721-14092819,14093096-14093108,
14093344-14093375,14093458-14093577,14093648-14093761,
14093848-14093981,14095005-14095047,14095394-14095445,
14095703-14095761
Length = 365
Score = 31.9 bits (69), Expect = 0.80
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 217 HHGRGRVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEASNVILSEVS 276
H R +VDI + +SD D V DES+ DQ FE N+ + E
Sbjct: 55 HRKRSKVDISSESNSDNDCSLSSDNHDGDVHLSNHDESSDNHDQHFEENDPLLHLTKE-- 112
Query: 277 DATGKIKVTPLSKPFKQENLSPQEKSQA 304
+ K+K+ +PF ++ + K ++
Sbjct: 113 ELMKKLKIKLGKRPFTDDHKKKRHKVES 140
>03_03_0049 +
14082358-14082613,14084662-14084795,14084883-14084996,
14085067-14085186,14085269-14085300,14085536-14085548,
14085825-14085923,14086010-14086141,14086213-14086316,
14086410-14086599,14086695-14086700
Length = 399
Score = 31.9 bits (69), Expect = 0.80
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 217 HHGRGRVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEASNVILSEVS 276
H R +VDI + +SD D V DES+ DQ FE N+ + E
Sbjct: 89 HRKRSKVDISSESNSDNDCSLSSDNHDGDVHLSNHDESSDNHDQHFEENDPLLHLTKE-- 146
Query: 277 DATGKIKVTPLSKPFKQENLSPQEKSQA 304
+ K+K+ +PF ++ + K ++
Sbjct: 147 ELMKKLKIKLGKRPFTDDHKKKRHKVES 174
>05_01_0018 +
125697-126130,126231-126356,126726-126825,126950-126969,
127118-127220,127331-127469,127577-127791,127873-128523
Length = 595
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 212 VRDQDHHGRGRVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTG---GDDQEFERNEAS 268
+ Q HG V + Y D D ++F GSG +DL ++ T DQ+FE+ A+
Sbjct: 113 IAGQSTHGAQSVALSGGYVDDEDHGEWFLYTGSGGRDLSGNKRTNKEQSSDQKFEKLNAA 172
>04_03_0205 +
12649724-12650191,12651493-12652025,12652114-12652239,
12652625-12652724,12652880-12652899,12653035-12653137,
12653213-12653351,12653448-12653662,12653772-12654320
Length = 750
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 212 VRDQDHHGRGRVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGD---DQEFERNEAS 268
+ Q HG V + Y D D ++F GSG +DL ++ T + DQ+FE+ A+
Sbjct: 302 IAGQSTHGAQSVALSGGYLDDEDHGEWFLYTGSGGRDLSGNKRTSKEQSFDQKFEKLNAA 361
>04_04_0924 -
29449285-29449290,29449386-29449575,29449669-29449772,
29449845-29449976,29450064-29450162,29450439-29450451,
29450688-29450719,29450802-29450921,29450992-29451105,
29451192-29451325,29454014-29454251
Length = 393
Score = 30.3 bits (65), Expect = 2.4
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Query: 213 RDQD----HHGRGRVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEAS 268
RD+D H R +V+I + +SD D V DES+ DQ FE N+
Sbjct: 75 RDEDEVMGHRKRSKVNISSESNSDNDCSLSSDNHDGDVHLSNHDESSDNHDQHFEENDPL 134
Query: 269 NVILSEVSDATGKIKVTPLSKPFKQENLSPQEKSQA 304
+ E + K+K+ +PF ++ + K ++
Sbjct: 135 LHLTKE--EHMKKLKIKLGKRPFTDDHKKKRHKVES 168
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 29.9 bits (64), Expect = 3.2
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Query: 187 NDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGRVDIVDKYS----SDVDVQKFFTAL 242
NDIY GE K VE F +++ + + VD +D+Y+ + + +K +A
Sbjct: 462 NDIYYITGESKKAVEN---SPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSAT 518
Query: 243 GSGVK-DLVPDESTGGDDQEFERNEASNVILSEVSDATGKIKVT 285
G+K D DE ++ + + VI + D K+ V+
Sbjct: 519 KEGLKLDESEDEKKRKEELKEKFEGLCKVIKEVLGDKVEKVVVS 562
>05_04_0132 + 18303925-18307164
Length = 1079
Score = 29.1 bits (62), Expect = 5.6
Identities = 16/93 (17%), Positives = 36/93 (38%)
Query: 225 IVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEASNVILSEVSDATGKIKV 284
+V ++ D + + LG G +D + D+Q + I SE +++
Sbjct: 351 VVSEFQEDQEEEGTSGRLGDGCEDEAAQQQEENDEQNISDFACESEIASEHEGVDFRVEA 410
Query: 285 TPLSKPFKQENLSPQEKSQAMTKAQELLNAKNY 317
+ ++N+ + + QE+ KN+
Sbjct: 411 CEEQERVSEDNILDAAHQTEVCREQEMQEEKNF 443
>01_01_0841 -
6564029-6564348,6564654-6564686,6564793-6565450,
6565530-6565694,6565789-6565878,6565982-6566182,
6566525-6566737,6566835-6567077
Length = 640
Score = 28.7 bits (61), Expect = 7.4
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Query: 92 AAAILTVGLDDKFGGAAVQHRETMGHES--ALFLSYFQTPLNYLEGGNPSGFNHVVTNAG 149
+A+ L D G AV+ G + A L++ ++ ++Y+ G NP G +++V
Sbjct: 362 SASFLLAVYSDHLAGGAVRCSGGGGAVAGAAELLAFAKSQVDYILGSNPRGTSYMVGYGA 421
Query: 150 AQKRMFQVKGKRDVRVRQVDPQIASMNKG 178
R +G +R P S +G
Sbjct: 422 VYPRQAHHRGSSIASIR-ASPSFVSCREG 449
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.132 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,457,521
Number of Sequences: 37544
Number of extensions: 448702
Number of successful extensions: 1097
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1069
Number of HSP's gapped (non-prelim): 31
length of query: 353
length of database: 14,793,348
effective HSP length: 83
effective length of query: 270
effective length of database: 11,677,196
effective search space: 3152842920
effective search space used: 3152842920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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