GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001755-TA|BGIBMGA001755-PA|IPR007123|Gelsolin region,
IPR007122|Gelsolin
         (353 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   4.2  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    24   5.5  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       24   5.5  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       24   5.5  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 9/80 (11%)

Query: 251 PDESTGGDDQE-FERNEASNVILSEVSDATGKIKVTPLSKPFKQENLSPQEKSQAMTKAQ 309
           PD     D Q  F R  ++   +  V DA  +      +K F++ N   ++K   M  A 
Sbjct: 532 PDSPRLSDAQYGFRRGRSTFSAIQRVVDAGRR------AKSFRRTN--HRDKRCLMVVAL 583

Query: 310 ELLNAKNYPSWVQVTRVLQN 329
           ++ NA N  SW  +   L+N
Sbjct: 584 DICNAFNTASWQSIADALRN 603


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 164 RVRQVDPQIASMNKGDVFVLDLDNDIYVFVGEKAKNVEK 202
           R ++ +PQI      D F  D D+D    VG++ ++ E+
Sbjct: 309 RSKKTNPQIVEYEFDDDFPFDDDSDFDDDVGDRLESEEE 347


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 164 RVRQVDPQIASMNKGDVFVLDLDNDIYVFVGEKAKNVEK 202
           R ++ +PQI      D F  D D+D    VG++ ++ E+
Sbjct: 79  RSKKTNPQIVEYEFDDDFPFDDDSDFDDDVGDRLESEEE 117


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 164 RVRQVDPQIASMNKGDVFVLDLDNDIYVFVGEKAKNVEK 202
           R ++ +PQI      D F  D D+D    VG++ ++ E+
Sbjct: 79  RSKKTNPQIVEYEFDDDFPFDDDSDFDDDVGDRLESEEE 117


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.132    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 348,365
Number of Sequences: 2123
Number of extensions: 14090
Number of successful extensions: 49
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 46
Number of HSP's gapped (non-prelim): 4
length of query: 353
length of database: 516,269
effective HSP length: 65
effective length of query: 288
effective length of database: 378,274
effective search space: 108942912
effective search space used: 108942912
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 48 (23.4 bits)