GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001755-TA|BGIBMGA001755-PA|IPR007123|Gelsolin region,
IPR007122|Gelsolin
         (353 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    25   0.75 
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    25   0.99 
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    25   1.3  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   4.0  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   5.3  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   5.3  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   5.3  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    23   5.3  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 25.4 bits (53), Expect = 0.75
 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 1/75 (1%)

Query: 259 DQEFERNEASNVILSEVSDATGKI-KVTPLSKPFKQENLSPQEKSQAMTKAQELLNAKNY 317
           D+ F   E +N + S ++  T K  K  PL +P+   + +  E    +  A ++   K  
Sbjct: 80  DKTFVTIERNNGVPSSLNVVTNKKGKGGPLLRPYPDWSFAKYEDCSGIVSAFKIAVDKFD 139

Query: 318 PSWVQVTRVLQNTEP 332
             WV  + ++ N +P
Sbjct: 140 RLWVLDSGLVNNNQP 154


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 25.0 bits (52), Expect = 0.99
 Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 1/19 (5%)

Query: 73  LSWDIHYWIGRESTQDESG 91
           LSW + +WI RE+T D  G
Sbjct: 261 LSW-VSFWIHREATSDRVG 278


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 213 RDQDHHGRGRVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGDDQEFERNEASN 269
           +D+D      V +V +  + V       A G  V ++  D+   GDD + +  EA+N
Sbjct: 356 KDEDEEEEEEVVVVGRNGAGVGAMN---ANGEAVGEVDEDDDDDGDDDDDDDVEAAN 409


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 10/18 (55%), Positives = 10/18 (55%)

Query: 229 YSSDVDVQKFFTALGSGV 246
           Y  DVDV  FF  LG  V
Sbjct: 130 YDCDVDVSTFFDQLGQEV 147


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 11/47 (23%), Positives = 22/47 (46%)

Query: 286 PLSKPFKQENLSPQEKSQAMTKAQELLNAKNYPSWVQVTRVLQNTEP 332
           PL +P+   + +  +    +  A +L   K    WV  + ++ NT+P
Sbjct: 102 PLLQPYPDWSFAKYDDCSGIVSASKLAIDKCDRLWVLDSGLVNNTQP 148


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 11/47 (23%), Positives = 22/47 (46%)

Query: 286 PLSKPFKQENLSPQEKSQAMTKAQELLNAKNYPSWVQVTRVLQNTEP 332
           PL +P+   + +  +    +  A +L   K    WV  + ++ NT+P
Sbjct: 102 PLLQPYPDWSFAKYDDCSGIVSASKLAIDKCDRLWVLDSGLVNNTQP 148


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 11/47 (23%), Positives = 22/47 (46%)

Query: 286 PLSKPFKQENLSPQEKSQAMTKAQELLNAKNYPSWVQVTRVLQNTEP 332
           PL +P+   + +  +    +  A +L   K    WV  + ++ NT+P
Sbjct: 102 PLLQPYPDWSFAKYDDCSGIVSASKLAIDKCDRLWVLDSGLVNNTQP 148


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 100 LDDKFGGAAVQHRETMGHESALFLSYFQ 127
           +D    GA + +   M   SA+F+S+FQ
Sbjct: 560 VDSSTSGATIVNYSIMIFLSAVFISFFQ 587


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.132    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,693
Number of Sequences: 429
Number of extensions: 3989
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 8
length of query: 353
length of database: 140,377
effective HSP length: 58
effective length of query: 295
effective length of database: 115,495
effective search space: 34071025
effective search space used: 34071025
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)