Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001755-TA|BGIBMGA001755-PA|IPR007123|Gelsolin region,
IPR007122|Gelsolin
(353 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g41740.1 68415.m05159 villin 2 (VLN2) nearly identical to vil... 153 2e-37
At5g57320.1 68418.m07160 villin, putative similar to villin 2 (V... 149 3e-36
At3g57410.1 68416.m06391 villin 3 (VLN3) nearly identical to vil... 148 6e-36
At4g30160.1 68417.m04289 villin, putative similar to villin 2 (... 136 3e-32
At2g29890.1 68415.m03630 villin 1 (VLN1) nearly identical to vil... 98 7e-21
At5g17460.1 68418.m02049 expressed protein 33 0.38
At3g21400.1 68416.m02701 expressed protein 31 1.5
At1g57820.1 68414.m06560 zinc finger (C3HC4-type RING finger) fa... 31 1.5
At3g14300.1 68416.m01809 pectinesterase family protein contains ... 30 2.0
At5g66440.1 68418.m08379 expressed protein 29 3.5
At5g14080.1 68418.m01647 pentatricopeptide (PPR) repeat-containi... 29 3.5
At1g52410.2 68414.m05915 caldesmon-related weak similarity to Ca... 29 3.5
At3g19420.1 68416.m02463 expressed protein 29 4.7
At3g17680.1 68416.m02257 expressed protein similar to GB:AAD4975... 29 4.7
At3g45780.1 68416.m04953 protein kinase / nonphototropic hypocot... 29 6.2
At3g01810.1 68416.m00123 expressed protein 29 6.2
At1g74010.1 68414.m08571 strictosidine synthase family protein s... 29 6.2
At1g52410.1 68414.m05914 caldesmon-related weak similarity to Ca... 29 6.2
At4g33750.1 68417.m04792 expressed protein 28 8.2
At1g30810.1 68414.m03767 transcription factor jumonji (jmj) fami... 28 8.2
>At2g41740.1 68415.m05159 villin 2 (VLN2) nearly identical to villin
2 (VLN2) [Arabidopsis thaliana] GI:3415115
Length = 976
Score = 153 bits (370), Expect = 2e-37
Identities = 103/301 (34%), Positives = 156/301 (51%), Gaps = 28/301 (9%)
Query: 63 IQTTSDNRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALF 122
+QTT + +DIH+WIG++++QDE+G AA+ TV LD GG AVQHRE GHES F
Sbjct: 49 LQTTQNKGGAYLFDIHFWIGKDTSQDEAGTAAVKTVELDAVLGGRAVQHREIQGHESDKF 108
Query: 123 LSYFQTPLNYLEGGNPSGFNHVVTNAGAQKRMFQVKGKRDVRVRQVDPQIASMNKGDVFV 182
LSYF+ + LEGG SGF V + R++ KGKR +R++QV +S+N DVF+
Sbjct: 109 LSYFKPCIIPLEGGVASGFK-TVEEEVFETRLYTCKGKRAIRLKQVPFARSSLNHDDVFI 167
Query: 183 LDLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGRVDIVD--KYSSDVDVQKFFT 240
LD + IY F G + E+ KA+ ++D+ H G V IVD K ++ D F+
Sbjct: 168 LDTEEKIYQFNGANSNIQERAKALEVVQYLKDKYHEGTCDVAIVDDGKLDTESDSGAFWV 227
Query: 241 ALGS----GVK-----DLVPDES-------TGGDDQEFERNEASNVILSE---VSDATGK 281
G G K D+VP+ + T G + + + + +++ + + D +
Sbjct: 228 LFGGFAPIGRKVANDDDIVPESTPPKLYCITDGKMEPIDGDLSKSMLENTKCYLLDCGAE 287
Query: 282 IKVTPLSKPFKQENLSPQEKSQAMTKAQELLNAKNYPSWVQVTRVLQNTEPAAFKQYFFT 341
I + + E+ A A+E L ++N P VTRV+Q E +FK F +
Sbjct: 288 IYI------WVGRVTQVDERKAASQSAEEFLASENRPKATHVTRVIQGYESHSFKSNFDS 341
Query: 342 W 342
W
Sbjct: 342 W 342
>At5g57320.1 68418.m07160 villin, putative similar to villin 2
(VLN2) [Arabidopsis thaliana] GI:3415115, villin 3
(VLN3) [Arabidopsis thaliana] GI:3415117; contains Pfam
profiles PF00626: Gelsolin repeat, PF02209: Villin
headpiece domain
Length = 962
Score = 149 bits (361), Expect = 3e-36
Identities = 95/297 (31%), Positives = 151/297 (50%), Gaps = 20/297 (6%)
Query: 63 IQTTSDNRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALF 122
++TT+ +L DIHYW+G++S+QDE+GA A++TV LD GG AVQ+RE GHE+ F
Sbjct: 51 LKTTASRSGSLHHDIHYWLGKDSSQDEAGAVAVMTVELDSALGGRAVQYREVQGHETEKF 110
Query: 123 LSYFQTPLNYLEGGNPSGFNHVVTNAGAQKRMFQVKGKRDVRVRQVDPQIASMNKGDVFV 182
LSYF+ + EGG SGFNHV Q R++ KGK VRV++V +++N DVF+
Sbjct: 111 LSYFKPCIIPQEGGVASGFNHVKPEE-HQTRLYICKGKHVVRVKEVPFVRSTLNHEDVFI 169
Query: 183 LDLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGRVDIVD--KYSSDVDVQKFFT 240
LD ++ I+ F G K+ E+ KA+ ++D H G+ + V+ + +D + +F+
Sbjct: 170 LDTESKIFQFSGSKSSIQERAKALEVVQYIKDTYHDGKCDIAAVEDGRMMADAEAGEFWG 229
Query: 241 ALGSGV----KDLVPDESTGGDDQ----EFERNEASNV----ILSEVSDATGKIKVTPLS 288
G K V D+ T D E+ + V + E+ D T K +
Sbjct: 230 LFGGFAPLPKKPAVNDDETAASDGIKLFSVEKGQTDAVEAECLTKELLD-TNKCYILDCG 288
Query: 289 KP---FKQENLSPQEKSQAMTKAQELLNAKNYPSWVQVTRVLQNTEPAAFKQYFFTW 342
+K + S ++ A A+E + P + V++ E F+ F +W
Sbjct: 289 LELFVWKGRSTSIDQRKSATEAAEEFFRSSEPPK-SNLVSVMEGYETVMFRSKFDSW 344
>At3g57410.1 68416.m06391 villin 3 (VLN3) nearly identical to villin
3 (VLN3) [Arabidopsis thaliana] GI:3415117
Length = 965
Score = 148 bits (358), Expect = 6e-36
Identities = 99/300 (33%), Positives = 151/300 (50%), Gaps = 26/300 (8%)
Query: 63 IQTTSDNRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALF 122
+QTT + +DIH+WIG++++QDE+G AA+ TV LD GG AVQ+RE GHES F
Sbjct: 51 LQTTQNKGGAYLFDIHFWIGKDTSQDEAGTAAVKTVELDAALGGRAVQYREIQGHESDKF 110
Query: 123 LSYFQTPLNYLEGGNPSGFNHVVTNAGAQKRMFQVKGKRDVRVRQVDPQIASMNKGDVFV 182
LSYF+ + LEGG SGF + R++ KGKR V ++QV +S+N DVF+
Sbjct: 111 LSYFKPCIIPLEGGVASGFKK-PEEEEFETRLYTCKGKRAVHLKQVPFARSSLNHDDVFI 169
Query: 183 LDLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGRVDIVD--KYSSDVDVQKFFT 240
LD IY F G + E+ KA+ ++D+ H G V IVD K ++ D +F+
Sbjct: 170 LDTKEKIYQFNGANSNIQERAKALVVIQYLKDKFHEGTSDVAIVDDGKLDTESDSGEFWV 229
Query: 241 ALGSGVKDLVPDESTGGDDQEFERNEASNVILSEVSDATGKIKVTPLSKPFKQEN----- 295
G G + +D+ E + L ++D + LSK + N
Sbjct: 230 LFG-GFAPIA--RKVASEDEIIP--ETTPPKLYSIADGQVESIDGDLSKSMLENNKCYLL 284
Query: 296 -------------LSPQEKSQAMTKAQELLNAKNYPSWVQVTRVLQNTEPAAFKQYFFTW 342
+E+ A+ A++ + ++N P ++TRV+Q EP +FK F +W
Sbjct: 285 DCGSEIFIWVGRVTQVEERKTAIQAAEDFVASENRPKATRITRVIQGYEPHSFKSNFDSW 344
Score = 47.2 bits (107), Expect = 2e-05
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 11/140 (7%)
Query: 80 WIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLNYLEGGNPS 139
W G+ S Q++ A L + + G VQ R G E F++ FQ + L+GG S
Sbjct: 441 WFGKNSNQEDQETAVRLASTMTNSLKGRPVQARIFEGKEPPQFVALFQHMV-VLKGGLSS 499
Query: 140 GFNHVVTNAGAQKRMF--------QVKGK--RDVRVRQVDPQIASMNKGDVFVLDLDNDI 189
G+ + +T G+ + QV G + + QV+ S+N D F+L +
Sbjct: 500 GYKNSMTEKGSSGETYTPESIALIQVSGTGVHNNKALQVEAVATSLNSYDCFLLQSGTSM 559
Query: 190 YVFVGEKAKNVEKLKAISFA 209
+++VG + + ++ A A
Sbjct: 560 FLWVGNHSTHEQQELAAKVA 579
>At4g30160.1 68417.m04289 villin, putative similar to villin 2
(VLN2) [Arabidopsis thaliana] GI:3415115, villin 3
(VLN3) [Arabidopsis thaliana] GI:3415117; contains Pfam
profiles PF00626: Gelsolin repeat, PF02209: Villin
headpiece domain
Length = 974
Score = 136 bits (328), Expect = 3e-32
Identities = 103/340 (30%), Positives = 163/340 (47%), Gaps = 49/340 (14%)
Query: 47 PAFANVGRTAGVQIWRIQ-------------------------TTSDNRNNLSWDIHYWI 81
PAF G+ AG++IWRI+ TT+ L DIHYW+
Sbjct: 10 PAFQGAGQKAGIEIWRIENFIPTPIPKSSIGKFFTGDSYIVLKTTALKTGALRHDIHYWL 69
Query: 82 GRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLNYLEGGNPSGF 141
G++++QDE+G AA+ TV LD GG AVQ+RE GHE+ FLSYF+ + EGG SGF
Sbjct: 70 GKDTSQDEAGTAAVKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGF 129
Query: 142 NHVVTNAGAQKRMFQVKGKRDVRVRQVDPQIASMNKGDVFVLDLDNDIYVFVGEKAKNVE 201
HVV R+F +GK V V++V +S+N D+++LD + I+ F G + E
Sbjct: 130 KHVVAEEHI-TRLFVCRGKHVVHVKEVPFARSSLNHDDIYILDTKSKIFQFNGSNSSIQE 188
Query: 202 KLKAISFANQVRDQDHHGRGRVDIVD--KYSSDVDVQKFFTALGSGVKDLVPDESTGGDD 259
+ KA+ ++D H G V V+ K +D D +F+ G G L P ++ +D
Sbjct: 189 RAKALEVVQYIKDTYHDGTCEVATVEDGKLMADADSGEFWGFFG-GFAPL-PRKTANDED 246
Query: 260 QEF----------ERNEASNV----ILSEVSDATGKIKVTPLSKP---FKQENLSPQEKS 302
+ + E+ +A+ V + E+ D T K + + S ++
Sbjct: 247 KTYNSDITRLFCVEKGQANPVEGDTLKREMLD-TNKCYILDCGIEVFVWMGRTTSLDDRK 305
Query: 303 QAMTKAQELLNAKNYPSWVQVTRVLQNTEPAAFKQYFFTW 342
A A+E++ + P Q+ R+++ E F+ F +W
Sbjct: 306 IASKAAEEMIRSSERPK-SQMIRIIEGFETVPFRSKFESW 344
Score = 41.9 bits (94), Expect = 6e-04
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 11/125 (8%)
Query: 80 WIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLNYLEGGNPS 139
W G++S ++E G+A + + + Q R G E F Q+ + + +GG S
Sbjct: 440 WFGKQSVEEERGSAVSMASKMVESMKFVPAQARIYEGKEPIQFFVIMQSFIVF-KGGISS 498
Query: 140 GFNHVVTNAGAQK--------RMFQVKGK--RDVRVRQVDPQIASMNKGDVFVLDLDNDI 189
G+ + +F+++G +++ QVDP AS+N ++L D+ +
Sbjct: 499 GYKKYIAEKEVDDDTYNENGVALFRIQGSGPENMQAIQVDPVAASLNSSYYYILHNDSSV 558
Query: 190 YVFVG 194
+ + G
Sbjct: 559 FTWAG 563
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/38 (28%), Positives = 25/38 (65%)
Query: 179 DVFVLDLDNDIYVFVGEKAKNVEKLKAISFANQVRDQD 216
D+F++D ++I+V+VG++ KL A++ + ++D
Sbjct: 651 DIFIIDCHSEIFVWVGQEVVPKNKLLALTIGEKFIEKD 688
>At2g29890.1 68415.m03630 villin 1 (VLN1) nearly identical to villin
1 (VLN1) [Arabidopsis thaliana] GI:3415113
Length = 909
Score = 98.3 bits (234), Expect = 7e-21
Identities = 55/171 (32%), Positives = 90/171 (52%), Gaps = 4/171 (2%)
Query: 75 WDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLNYLE 134
+DIHYW+G ++ + +S A+ + LD G VQ+RE G E+ FLSYF+ + +E
Sbjct: 63 YDIHYWLGIDANEVDSILASDKALDLDAALGCCTVQYREVQGQETEKFLSYFKPCIIPVE 122
Query: 135 GGNPSGFNHVVTNAGAQKRMFQVKGKRDVRVRQVDPQIASMNKGDVFVLDLDNDIYVFVG 194
G + Q + + KG VRV++V +S+N DVF+LD + +++F G
Sbjct: 123 GKYSPKTG--IAGETYQVTLLRCKGDHVVRVKEVPFLRSSLNHDDVFILDTASKVFLFAG 180
Query: 195 EKAKNVEKLKAISFANQVRDQDHHGRGRVDIVD--KYSSDVDVQKFFTALG 243
+ EK KA+ ++D H GR V ++ K+S D D +F++ G
Sbjct: 181 CNSSTQEKAKAMEVVEYIKDNKHDGRCEVATIEDGKFSGDSDAGEFWSFFG 231
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 179 DVFVLDLDNDIYVFVGEKAKNVEKLKAISFANQVRDQD 216
DVF+LD +++YV++G + K +A++ + + D
Sbjct: 648 DVFLLDCQSEVYVWIGSNSNIKSKEEALTLGLKFLEMD 685
>At5g17460.1 68418.m02049 expressed protein
Length = 309
Score = 32.7 bits (71), Expect = 0.38
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 184 DLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGRV-DIVDKYSSDVDVQKFFTAL 242
++++D ++ G + ++ +K K S N++ + R + D D+ D + +
Sbjct: 75 EMEDDDTLWSGSEDESNDKTKQESGRNRLEKEIKKARQQAKDSTDQIDGDDSDELYSVWS 134
Query: 243 GSGVKDLVPDESTGGDDQEFER----NEASNVILSEVSDATGKIKVTPLSKPFKQEN--- 295
GS + + G DD + NEAS+ L ++ + K K +S+ K EN
Sbjct: 135 GSDEEKTLWTGDEGDDDDDIPTEPRPNEASDKYLDKLFEFEEKPKYRTISELLKSENEPE 194
Query: 296 -LSPQEKSQ--AMTKAQELLNAKNYPSWVQVTRVLQNTE 331
LSP +K++ A+ A + LN + V V+ + +
Sbjct: 195 ELSPGKKARKLAVENALKKLNKGPDGRYTNVWEVMSDVD 233
>At3g21400.1 68416.m02701 expressed protein
Length = 188
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 199 NVEKLKAISFANQVRDQDHHG-RGRVDIVDKYSSDV-DVQKF--FTALGSGVKD 248
NV +++ I Q + QDHHG G +I +KY DV VQK F +L + D
Sbjct: 128 NVAQVRHIMLLFQGKSQDHHGPMGVNEIAEKYRIDVSQVQKITQFLSLPQEITD 181
>At1g57820.1 68414.m06560 zinc finger (C3HC4-type RING finger)
family protein low similarity to nuclear protein np95
[Mus musculus] GI:4220590; contains Pfam profiles
PF02182: YDG/SRA domain, PF00097: Zinc finger, C3HC4
type (RING finger), PF00628: PHD-finger
Length = 645
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 212 VRDQDHHGRGRVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGD---DQEFERNEAS 268
+ Q +G V + Y D D ++F GSG +DL ++ T + DQ+FE++ A+
Sbjct: 303 IAGQSTYGAQSVALSGGYKDDEDHGEWFLYTGSGGRDLSGNKRTNKEQSFDQKFEKSNAA 362
>At3g14300.1 68416.m01809 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 968
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 250 VPDESTGGDDQEFERNEASNVILSEVSDATGKIKVTPLSKPFKQENLSPQEKSQAMTKAQ 309
V D T GD + E N S + S + T S + L KS+ + +
Sbjct: 574 VTDIGTCGDTLD-EDNYNSPIPQKLKSAMVNSTEFTSNSLAIVAQVLKKPSKSRIPVQGR 632
Query: 310 ELLNAKNYPSWVQ--VTRVLQ 328
LLN+ ++P+WV+ V R+LQ
Sbjct: 633 RLLNSNSFPNWVRPGVRRLLQ 653
>At5g66440.1 68418.m08379 expressed protein
Length = 252
Score = 29.5 bits (63), Expect = 3.5
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 180 VFVLDLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGRVDIVDKYSSDVDVQKFF 239
V V DLD++ + V E +VE S ++V +GR + D+ K SS++ +
Sbjct: 133 VIVTDLDSNPNLTVDENMPHVEIDSDSSPHSKV-----YGRSKSDVSGKQSSNMVMMMMK 187
Query: 240 TALGSGVKDLVPDESTGGDDQEFERNEASNVILSEVSDATGKIKVTPLSKPFKQENLS 297
+L + E+ DD E E+N + + +E T + + +QE+L+
Sbjct: 188 RSLQRSETEKFCKETENDDDSEEEKNYPEDDLSNEEFQKTIEAFIAKQRMFRRQESLA 245
>At5g14080.1 68418.m01647 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 634
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 278 ATGKIK-VTPLSKPFKQENLSPQEKSQAMTKAQELLNAKNYPSWVQ 322
+TGK+ + LSK K NL +KS + KA ELL++K Y S +Q
Sbjct: 355 STGKLPAIRTLSKLSK--NLCRHDKSDHLIKAYELLSSKGYFSELQ 398
>At1g52410.2 68414.m05915 caldesmon-related weak similarity to
Caldesmon (CDM) (Swiss-Prot:P12957) [Gallus gallus]
Length = 759
Score = 29.5 bits (63), Expect = 3.5
Identities = 30/145 (20%), Positives = 63/145 (43%), Gaps = 13/145 (8%)
Query: 198 KNVEKLKAISFANQVRDQDHHGRGRVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTG- 256
K +E+LK F D++H + R +++ +++ F A G++ L +STG
Sbjct: 196 KELEQLKVNDFTGDKDDEEHSAK-RKSMLEA------IEREFEAAMEGIEALKVSDSTGS 248
Query: 257 GDDQEFERNEASNVILSEVSDATGKIKVTPLSKPFKQENLSPQEKSQAMTKAQELLN--A 314
GDD+E A + + E + + L + ++ + + + K Q LL
Sbjct: 249 GDDEE---QSAKRLSMLEEIEREFEAASKGLEQLRASDSTADNNEEEHAAKGQSLLEEIE 305
Query: 315 KNYPSWVQVTRVLQNTEPAAFKQYF 339
+ + + + + LQ + K++F
Sbjct: 306 REFEAATESLKQLQVDDSTEDKEHF 330
>At3g19420.1 68416.m02463 expressed protein
Length = 611
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 254 STGGDDQEFERNEASNVILSEVSDATGKIKVTPLSKPFKQENLSPQEKSQAMTKAQE 310
S G D+E E + +V D+TG K T + E +++ +TKA E
Sbjct: 491 SVPGPDKETENPDKDDVFSDNEGDSTGPTKTTSSASSQTPEAKKSADETAVLTKATE 547
>At3g17680.1 68416.m02257 expressed protein similar to GB:AAD49756
from [Arabidopsis thaliana]
Length = 313
Score = 29.1 bits (62), Expect = 4.7
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Query: 183 LDLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGRVDIVDKYSSDVDVQKFF--- 239
LDL N +G + S NQ+ D +D V + SS+V+ F
Sbjct: 59 LDLYNGYVTLLGRSSHQTRLKPTTSLPNQLLQDDDDCISDIDSVSEVSSEVESTLSFQQM 118
Query: 240 ---TALGSGVKDLVPDESTGGDDQEFERNE 266
TA+ V +LV T D+E ++E
Sbjct: 119 KDPTAVSEKVDELVSQLVTASLDKEILKHE 148
>At3g45780.1 68416.m04953 protein kinase / nonphototropic hypocotyl
protein 1 (NPH1) / phototropin identical to SP|O48963
Nonphototropic hypocotyl protein 1 (EC 2.7.1.37)
(Phototropin) {Arabidopsis thaliana}, cDNA
nonphototropic hypocotyl 1 (NPH1) GI:2832240; contains
Pfam profiles PF00069:Protein kinase domain and
PF00785:PAC motif
Length = 996
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Query: 256 GGDDQEFERNEASNVILSEVSDATGK--IKVTPLSKPFKQENLSPQEKSQAMTKAQELL- 312
G E RN + E D K + + + N++P++ +K
Sbjct: 578 GSKHVEPVRNVIEETAVKEGEDLVKKTAVNIDEAVRELPDANMTPEDLWANHSKVVHCKP 637
Query: 313 NAKNYPSWVQVTRVLQNTEPAAFKQY 338
+ K+ P W+ + +VL++ EP K +
Sbjct: 638 HRKDSPPWIAIQKVLESGEPIGLKHF 663
>At3g01810.1 68416.m00123 expressed protein
Length = 921
Score = 28.7 bits (61), Expect = 6.2
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 11/111 (9%)
Query: 224 DIVDKYSSDVDVQKFFTALGSGVKDLVPDESTGGDDQ-----EFERNEASNVILSEVSDA 278
D + SS VD+ F L G+ D P+ S G + + NE+S + S
Sbjct: 264 DQIPSRSSSVDLSSVFH-LPEGISDSAPNTSLSGLEHCANVFITDTNESSK-LASNGQHN 321
Query: 279 TGKIKVTPLSKPFKQENLSPQEKSQAMTKAQELLNAKNYPSWVQVTRVLQN 329
G+ K PL + +NLS +A +Q+L + + S V+ +R +++
Sbjct: 322 NGEAKSVPL----QIDNLSENASPRASVNSQDLTSDQEPESIVEKSRKVKS 368
>At1g74010.1 68414.m08571 strictosidine synthase family protein
similar to strictosidine synthase [Rauvolfia
serpentina][SP|P15324]; contains strictosidine synthase
domain PF03088
Length = 325
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 262 FERNEASNVILSEVSDATGKIKVTPLSKPF 291
F +NE N +LSEV++ G + + L+ PF
Sbjct: 290 FLKNEFGNTLLSEVNEFNGHLYIGTLTGPF 319
>At1g52410.1 68414.m05914 caldesmon-related weak similarity to
Caldesmon (CDM) (Swiss-Prot:P12957) [Gallus gallus]
Length = 755
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 198 KNVEKLKAISFANQVRDQDHHGRGRVDIVDKYSSDVDVQKFFTALGSGVKDLVPDESTG- 256
K +E+LK F D++H + R +++ +++ F A G++ L +STG
Sbjct: 196 KELEQLKVNDFTGDKDDEEHSAK-RKSMLEA------IEREFEAAMEGIEALKVSDSTGS 248
Query: 257 GDDQE 261
GDD+E
Sbjct: 249 GDDEE 253
>At4g33750.1 68417.m04792 expressed protein
Length = 148
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 243 GSGVKDLVPDESTGGDDQEFERNEASNVILSEVSDATGKIKVTPLSKPFKQENLSPQ 299
GS ++ + + GDD E E+SN+ +E+++ T +S+ PQ
Sbjct: 67 GSNTTEVNENSRSEGDDDESGEKESSNIFSTELTEEADNTSGTSISQEEMDALTDPQ 123
>At1g30810.1 68414.m03767 transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein
contains similarity to Swiss-Prot:P29375
retinoblastoma-binding protein 2 (RBBP-2) [Homo
sapiens]; contains Pfam domains PF02375: jmjN domain and
PF02373: jmjC domain; intron between exons 6 and 7 was
required to circumvent a frameshift. There could be an
underlying sequence error.
Length = 787
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 272 LSEVSDATGKI-KVTPLSKPFKQENLSPQE--KSQAMTKAQELLNAKNYPSWVQVTRVLQ 328
L E D I K+ PL++P+ + P K K + + +P+ +Q +LQ
Sbjct: 66 LEEFVDPLAYIEKIRPLAEPYGICRIIPPSTWKPPCRLKEKSIWEQTKFPTRIQTVDLLQ 125
Query: 329 NTEP 332
N EP
Sbjct: 126 NREP 129
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.132 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,485,159
Number of Sequences: 28952
Number of extensions: 361020
Number of successful extensions: 975
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 945
Number of HSP's gapped (non-prelim): 35
length of query: 353
length of database: 12,070,560
effective HSP length: 82
effective length of query: 271
effective length of database: 9,696,496
effective search space: 2627750416
effective search space used: 2627750416
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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