Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001754-TA|BGIBMGA001754-PA|IPR007122|Gelsolin,
IPR007123|Gelsolin region
(527 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g41740.1 68415.m05159 villin 2 (VLN2) nearly identical to vil... 134 1e-31
At3g57410.1 68416.m06391 villin 3 (VLN3) nearly identical to vil... 134 1e-31
At5g57320.1 68418.m07160 villin, putative similar to villin 2 (V... 131 1e-30
At4g30160.1 68417.m04289 villin, putative similar to villin 2 (... 129 4e-30
At2g29890.1 68415.m03630 villin 1 (VLN1) nearly identical to vil... 87 3e-17
At1g63130.1 68414.m07134 pentatricopeptide (PPR) repeat-containi... 51 2e-06
At1g62930.1 68414.m07105 pentatricopeptide (PPR) repeat-containi... 51 2e-06
At1g62910.1 68414.m07103 pentatricopeptide (PPR) repeat-containi... 47 4e-05
At1g63400.1 68414.m07170 pentatricopeptide (PPR) repeat-containi... 44 3e-04
At1g62670.1 68414.m07073 pentatricopeptide (PPR) repeat-containi... 43 6e-04
At1g62590.1 68414.m07061 pentatricopeptide (PPR) repeat-containi... 42 8e-04
At1g63330.1 68414.m07159 pentatricopeptide (PPR) repeat-containi... 42 0.001
At1g62680.1 68414.m07074 pentatricopeptide (PPR) repeat-containi... 41 0.002
At1g64580.1 68414.m07320 pentatricopeptide (PPR) repeat-containi... 40 0.005
At1g63080.1 68414.m07126 pentatricopeptide (PPR) repeat-containi... 39 0.009
At2g02150.1 68415.m00151 pentatricopeptide (PPR) repeat-containi... 38 0.012
At5g41170.1 68418.m05004 pentatricopeptide (PPR) repeat-containi... 37 0.038
At5g16640.1 68418.m01948 pentatricopeptide (PPR) repeat-containi... 37 0.038
At1g05670.1 68414.m00588 UDP-glucoronosyl/UDP-glucosyl transfera... 37 0.038
At4g26800.1 68417.m03860 pentatricopeptide (PPR) repeat-containi... 36 0.088
At5g46100.1 68418.m05668 pentatricopeptide (PPR) repeat-containi... 35 0.12
At1g79540.1 68414.m09272 pentatricopeptide (PPR) repeat-containi... 35 0.15
At1g13040.1 68414.m01512 pentatricopeptide (PPR) repeat-containi... 34 0.20
At1g06580.1 68414.m00697 pentatricopeptide (PPR) repeat-containi... 34 0.20
At3g48810.1 68416.m05330 pentatricopeptide (PPR) repeat-containi... 34 0.27
At1g63150.1 68414.m07137 pentatricopeptide (PPR) repeat-containi... 33 0.35
At1g20300.1 68414.m02534 pentatricopeptide (PPR) repeat-containi... 33 0.47
At1g02060.1 68414.m00126 pentatricopeptide (PPR) repeat-containi... 33 0.47
At5g59900.1 68418.m07512 pentatricopeptide (PPR) repeat-containi... 33 0.62
At1g09900.1 68414.m01114 pentatricopeptide (PPR) repeat-containi... 33 0.62
At4g00450.1 68417.m00062 expressed protein 31 1.9
At3g46750.1 68416.m05075 hypothetical protein 31 1.9
At5g65560.1 68418.m08249 pentatricopeptide (PPR) repeat-containi... 30 3.3
At4g26680.1 68417.m03844 pentatricopeptide (PPR) repeat-containi... 30 3.3
At2g15980.1 68415.m01829 pentatricopeptide (PPR) repeat-containi... 30 3.3
At3g07290.1 68416.m00868 pentatricopeptide (PPR) repeat-containi... 30 4.4
At3g03650.1 68416.m00368 exostosin family protein contains Pfam ... 30 4.4
At1g62720.1 68414.m07079 pentatricopeptide (PPR) repeat-containi... 30 4.4
At1g14710.2 68414.m01759 hydroxyproline-rich glycoprotein family... 30 4.4
At1g14710.1 68414.m01758 hydroxyproline-rich glycoprotein family... 30 4.4
At1g13800.1 68414.m01620 pentatricopeptide (PPR) repeat-containi... 30 4.4
At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest ... 29 5.8
At4g05150.1 68417.m00773 octicosapeptide/Phox/Bem1p (PB1) domain... 29 5.8
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 29 5.8
At3g04760.1 68416.m00512 pentatricopeptide (PPR) repeat-containi... 29 5.8
At2g13370.1 68415.m01476 chromodomain-helicase-DNA-binding famil... 29 5.8
At1g63230.1 68414.m07147 pentatricopeptide (PPR) repeat-containi... 29 5.8
At1g63070.1 68414.m07125 pentatricopeptide (PPR) repeat-containi... 29 5.8
At1g09820.1 68414.m01104 pentatricopeptide (PPR) repeat-containi... 29 5.8
At4g00930.1 68417.m00126 COP1-interacting protein 4.1 (CIP4.1) i... 29 7.6
At1g80550.1 68414.m09443 pentatricopeptide (PPR) repeat-containi... 29 7.6
At1g64100.1 68414.m07261 pentatricopeptide (PPR) repeat-containi... 29 7.6
At1g22960.1 68414.m02869 pentatricopeptide (PPR) repeat-containi... 29 7.6
>At2g41740.1 68415.m05159 villin 2 (VLN2) nearly identical to villin
2 (VLN2) [Arabidopsis thaliana] GI:3415115
Length = 976
Score = 134 bits (325), Expect = 1e-31
Identities = 66/107 (61%), Positives = 77/107 (71%), Gaps = 2/107 (1%)
Query: 7 AFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDK-DRLTWDIHFWLG 65
AF AG+KPG EIWRIENFE V VPK++ G FY GD+YIVL TT +K +DIHFW+G
Sbjct: 9 AFQGAGQKPGTEIWRIENFEAVPVPKSEHGKFYMGDTYIVLQTTQNKGGAYLFDIHFWIG 68
Query: 66 SRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSP 112
TSQDEAG AA+ TV L D G AVQHRE+Q +ES +FL YF P
Sbjct: 69 KDTSQDEAGTAAVKTVEL-DAVLGGRAVQHREIQGHESDKFLSYFKP 114
Score = 94.3 bits (224), Expect = 2e-19
Identities = 63/193 (32%), Positives = 92/193 (47%), Gaps = 9/193 (4%)
Query: 334 SLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRADIEVVDSEAHDG 393
SLN+ D FILD + +I+ F G + ER KA+ V +KD+ H G D+ +VD D
Sbjct: 159 SLNHDDVFILDTEEKIYQFNGANSNIQERAKALEVVQYLKDKYHEGTCDVAIVDDGKLDT 218
Query: 394 IFDRFFDALGSGNKEAIADAEEGGDDQEFERVVTKEVSLSEISDKTGSIRITRLPAPLKK 453
D + G I DD E K L I+D ++ + L K
Sbjct: 219 ESDSGAFWVLFGGFAPIGRKVANDDDIVPESTPPK---LYCITDG----KMEPIDGDLSK 271
Query: 454 EQLNTDECYVLDTGSYSGIYVWVGRGSNLKEKAEAMNRAEQYLKYHDYPAWVHVSKVPEG 513
L +CY+LD G + IY+WVGR + + E+ A AE++L + P HV++V +G
Sbjct: 272 SMLENTKCYLLDCG--AEIYIWVGRVTQVDERKAASQSAEEFLASENRPKATHVTRVIQG 329
Query: 514 AEPIPFKQYFEDW 526
E FK F+ W
Sbjct: 330 YESHSFKSNFDSW 342
Score = 47.6 bits (108), Expect = 2e-05
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Query: 17 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRL-TWDIHFWLGSRTSQDEAGA 75
LE+W + +PK G YSGD Y+VL T +R + + W G ++ ++
Sbjct: 392 LEVWYVNGKVKTPLPKEDIGKLYSGDCYLVLYTYHSGERKDEYFLSCWFGKKSIPEDQD- 450
Query: 76 AAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSP 112
AI N +G VQ R + E +F+ F P
Sbjct: 451 TAIRLANTMSNSLKGRPVQGRIYEGKEPPQFVALFQP 487
Score = 39.9 bits (89), Expect = 0.004
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 148 PAIRYLKGGHASGFSHVTINEGTEKRLFQIKGKRNVRVKQVSCTRTYID 196
P I L+GG ASGF V E E RL+ KGKR +R+KQV R+ ++
Sbjct: 114 PCIIPLEGGVASGFKTVE-EEVFETRLYTCKGKRAIRLKQVPFARSSLN 161
Score = 39.5 bits (88), Expect = 0.005
Identities = 54/241 (22%), Positives = 96/241 (39%), Gaps = 28/241 (11%)
Query: 292 SSSRAQTDTDPTYIQPRVLYYTTVDIVLCSSVFVSKVKPTFESLNNGDCFILDVDHQIFV 351
SS TD TY P + V + +V+ SLN+ +CF+L +F+
Sbjct: 501 SSMGESESTDETYT-PESIALVQVSGTGVHNNKAVQVETVATSLNSYECFLLQSGTSMFL 559
Query: 352 FVGEKAKGVERMKAITVANQIKDQDHNGRADIEVVDSEAHDGI-FDRFFDALGSGNKEAI 410
+ G ++ + A VA +K + A +G F+ ALG K+
Sbjct: 560 WHGNQSTHEQLELATKVAEFLKPG---------ITLKHAKEGTESSTFWFALGG--KQNF 608
Query: 411 ADAEEGGDDQEFERVVTKEVSLSEISDKTGSIRITRLPAPLKKEQLNTDECYVLDTGSYS 470
+ + ++ L + G ++ + ++ L T++ Y LDT ++
Sbjct: 609 TSKKASSE-------TIRDPHLFSFAFNRGKFQVEEI-YNFAQDDLLTEDIYFLDT--HA 658
Query: 471 GIYVWVGRGSNLKEKAEAMNRAEQYLKYHDYPAWVH----VSKVPEGAEPIPFKQYFEDW 526
++VWVG+ KEK ++Y+ +H + K+ EG EP F YF W
Sbjct: 659 EVFVWVGQCVEPKEKQTVFEIGQKYIDLAGSLEGLHPKVPIYKINEGNEPCFFTTYF-SW 717
Query: 527 N 527
+
Sbjct: 718 D 718
>At3g57410.1 68416.m06391 villin 3 (VLN3) nearly identical to villin
3 (VLN3) [Arabidopsis thaliana] GI:3415117
Length = 965
Score = 134 bits (324), Expect = 1e-31
Identities = 65/107 (60%), Positives = 77/107 (71%), Gaps = 2/107 (1%)
Query: 7 AFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDK-DRLTWDIHFWLG 65
AF G+KPG EIWRIENFEPV VPK++ G FY GD+YIVL TT +K +DIHFW+G
Sbjct: 11 AFQGVGQKPGTEIWRIENFEPVPVPKSEHGKFYMGDTYIVLQTTQNKGGAYLFDIHFWIG 70
Query: 66 SRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSP 112
TSQDEAG AA+ TV L D G AVQ+RE+Q +ES +FL YF P
Sbjct: 71 KDTSQDEAGTAAVKTVEL-DAALGGRAVQYREIQGHESDKFLSYFKP 116
Score = 95.1 bits (226), Expect = 1e-19
Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 322 SVFVSKVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRA 381
+V + +V SLN+ D FILD +I+ F G + ER KA+ V +KD+ H G +
Sbjct: 149 AVHLKQVPFARSSLNHDDVFILDTKEKIYQFNGANSNIQERAKALVVIQYLKDKFHEGTS 208
Query: 382 DIEVVDSEAHDGIFDRFFDALGSGNKEAIADAEEGGDDQEFERVVTKEVSLSEISDKTGS 441
D+ +VD D D + G IA D+ E T L I+D
Sbjct: 209 DVAIVDDGKLDTESDSGEFWVLFGGFAPIARKVASEDEIIPE---TTPPKLYSIADG--- 262
Query: 442 IRITRLPAPLKKEQLNTDECYVLDTGSYSGIYVWVGRGSNLKEKAEAMNRAEQYLKYHDY 501
++ + L K L ++CY+LD G S I++WVGR + ++E+ A+ AE ++ +
Sbjct: 263 -QVESIDGDLSKSMLENNKCYLLDCG--SEIFIWVGRVTQVEERKTAIQAAEDFVASENR 319
Query: 502 PAWVHVSKVPEGAEPIPFKQYFEDW 526
P +++V +G EP FK F+ W
Sbjct: 320 PKATRITRVIQGYEPHSFKSNFDSW 344
Score = 46.4 bits (105), Expect = 5e-05
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 327 KVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRADIEVV 386
+V+ SLN+ DCF+L +F++VG + ++ A VA +K A E
Sbjct: 537 QVEAVATSLNSYDCFLLQSGTSMFLWVGNHSTHEQQELAAKVAEFLKPGTTIKHAK-EGT 595
Query: 387 DSEAHDGIFDRFFDALGSGNKEAIADAEEGGDDQEFERVVTKEVSLSEISDKTGSIRITR 446
+S + F+ ALG ++ ++ ++ L S G ++
Sbjct: 596 ESSS-------FWFALGG---------KQNFTSKKVSSETVRDPHLFSFSFNRGKFQVEE 639
Query: 447 LPAPLKKEQLNTDECYVLDTGSYSGIYVWVGRGSNLKEKAEAMNRAEQYL----KYHDYP 502
+ ++ L T+E ++LDT ++ ++VWVG+ + KEK A ++Y+
Sbjct: 640 IHN-FDQDDLLTEEMHLLDT--HAEVFVWVGQCVDPKEKQTAFEIGQRYINLAGSLEGLS 696
Query: 503 AWVHVSKVPEGAEPIPFKQYFEDWN 527
V + K+ EG EP F YF W+
Sbjct: 697 PKVPLYKITEGNEPCFFTTYF-SWD 720
Score = 43.6 bits (98), Expect = 3e-04
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 17 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRL-TWDIHFWLGSRTSQDEAGA 75
LE+W I+ + K G YSGD Y+VL T +R + + W G ++Q++
Sbjct: 394 LEVWYIDANSKTVLSKDHVGKLYSGDCYLVLYTYHSGERKEDYFLCCWFGKNSNQEDQET 453
Query: 76 AAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYF 110
A L + + +G VQ R + E +F+ F
Sbjct: 454 AVRLASTMTN-SLKGRPVQARIFEGKEPPQFVALF 487
Score = 36.7 bits (81), Expect = 0.038
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 148 PAIRYLKGGHASGFSHVTINEGTEKRLFQIKGKRNVRVKQVSCTRTYID 196
P I L+GG ASGF E E RL+ KGKR V +KQV R+ ++
Sbjct: 116 PCIIPLEGGVASGFKKPE-EEEFETRLYTCKGKRAVHLKQVPFARSSLN 163
>At5g57320.1 68418.m07160 villin, putative similar to villin 2
(VLN2) [Arabidopsis thaliana] GI:3415115, villin 3
(VLN3) [Arabidopsis thaliana] GI:3415117; contains Pfam
profiles PF00626: Gelsolin repeat, PF02209: Villin
headpiece domain
Length = 962
Score = 131 bits (317), Expect = 1e-30
Identities = 63/113 (55%), Positives = 81/113 (71%), Gaps = 2/113 (1%)
Query: 1 MPEVHQAFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKD-RLTWD 59
M ++ QA AG+K G+EIWRIENF+PV VP+ G F++GDSYIVL TT + L D
Sbjct: 5 MRDLDQALQGAGQKSGIEIWRIENFKPVTVPQESHGKFFTGDSYIVLKTTASRSGSLHHD 64
Query: 60 IHFWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSP 112
IH+WLG +SQDEAGA A++TV L D G AVQ+REVQ +E+++FL YF P
Sbjct: 65 IHYWLGKDSSQDEAGAVAVMTVEL-DSALGGRAVQYREVQGHETEKFLSYFKP 116
Score = 88.6 bits (210), Expect = 9e-18
Identities = 69/219 (31%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 317 IVLCSSVFVSKVK--PTFES-LNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIK 373
+ +C V +VK P S LN+ D FILD + +IF F G K+ ER KA+ V IK
Sbjct: 141 LYICKGKHVVRVKEVPFVRSTLNHEDVFILDTESKIFQFSGSKSSIQERAKALEVVQYIK 200
Query: 374 DQDHNGRADIEVVD-----SEAHDGIFDRFFDALGS-GNKEAIADAEEGGDDQEFERVVT 427
D H+G+ DI V+ ++A G F F K A+ D E D
Sbjct: 201 DTYHDGKCDIAAVEDGRMMADAEAGEFWGLFGGFAPLPKKPAVNDDETAASD-------- 252
Query: 428 KEVSLSEISDKTGSIRITRLPAPLKKEQLNTDECYVLDTGSYSGIYVWVGRGSNLKEKAE 487
+ S + G L KE L+T++CY+LD G ++VW GR +++ ++
Sbjct: 253 ---GIKLFSVEKGQTDAVEAEC-LTKELLDTNKCYILDCG--LELFVWKGRSTSIDQRKS 306
Query: 488 AMNRAEQYLKYHDYPAWVHVSKVPEGAEPIPFKQYFEDW 526
A AE++ + + P VS V EG E + F+ F+ W
Sbjct: 307 ATEAAEEFFRSSEPPKSNLVS-VMEGYETVMFRSKFDSW 344
Score = 46.0 bits (104), Expect = 6e-05
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 327 KVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRADIEVV 386
+++ LN+ C+IL D +F + G ++ + + IK + +A E
Sbjct: 538 QIEAASAGLNSSHCYILHGDSTVFTWCGNLTSSEDQELMERMLDLIKPNEPT-KAQKEGS 596
Query: 387 DSEAHDGIFDRFFDALGSGNKEAIADAEEGGDDQEFERVVTKEVSLSEISDKTGSIRITR 446
+SE +F++ LG G E Q+ +R + L + S++ T
Sbjct: 597 ESE-------QFWELLG-GKSEY--------PSQKIKRDGESDPHLFSCTYTNESLKATE 640
Query: 447 LPAPLKKEQLNTDECYVLDTGSYSGIYVWVGRGSNLKEKAEAMNRAEQYLKYHDYPAWVH 506
+ ++ L T++ ++LD ++ ++VWVG+ + K+K +A++ E +LK HD+
Sbjct: 641 I-FNFTQDDLMTEDIFILDC--HTEVFVWVGQQVDPKKKPQALDIGENFLK-HDFLLENL 696
Query: 507 VSKVP-----EGAEPIPFKQYFEDWN 527
S+ P EG EP PF F W+
Sbjct: 697 ASETPIYIVTEGNEP-PFFTRFFTWD 721
Score = 41.5 bits (93), Expect = 0.001
Identities = 22/94 (23%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 17 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHFWLGSRTSQDEAGAA 76
L++WRI E + + + FYSGD YI+ + +DR + W G ++ +++ +A
Sbjct: 396 LQVWRINCEEKILLEAAEQSKFYSGDCYILQYSYPGEDREEHLVGTWFGKQSVEEDRASA 455
Query: 77 AILTVNLDDEQFQGSAVQHREVQYYESKEFLEYF 110
++L ++ + + + E KE +++F
Sbjct: 456 ----ISLANKMVESMKFVPAQARINEGKEPIQFF 485
Score = 38.7 bits (86), Expect = 0.009
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 139 TELLIRETFPAIRYLKGGHASGFSHVTINEGTEKRLFQIKGKRNVRVKQVSCTRTYID 196
TE + P I +GG ASGF+HV E + RL+ KGK VRVK+V R+ ++
Sbjct: 107 TEKFLSYFKPCIIPQEGGVASGFNHVKPEEH-QTRLYICKGKHVVRVKEVPFVRSTLN 163
>At4g30160.1 68417.m04289 villin, putative similar to villin 2
(VLN2) [Arabidopsis thaliana] GI:3415115, villin 3
(VLN3) [Arabidopsis thaliana] GI:3415117; contains Pfam
profiles PF00626: Gelsolin repeat, PF02209: Villin
headpiece domain
Length = 974
Score = 129 bits (312), Expect = 4e-30
Identities = 64/113 (56%), Positives = 79/113 (69%), Gaps = 2/113 (1%)
Query: 1 MPEVHQAFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDK-DRLTWD 59
M ++ AF AG+K G+EIWRIENF P +PK+ G F++GDSYIVL TT K L D
Sbjct: 5 MRDLDPAFQGAGQKAGIEIWRIENFIPTPIPKSSIGKFFTGDSYIVLKTTALKTGALRHD 64
Query: 60 IHFWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSP 112
IH+WLG TSQDEAG AA+ TV L D G AVQ+REVQ +E+++FL YF P
Sbjct: 65 IHYWLGKDTSQDEAGTAAVKTVEL-DAALGGRAVQYREVQGHETEKFLSYFKP 116
Score = 88.2 bits (209), Expect = 1e-17
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 19/209 (9%)
Query: 323 VFVSKVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRAD 382
V V +V SLN+ D +ILD +IF F G + ER KA+ V IKD H+G +
Sbjct: 150 VHVKEVPFARSSLNHDDIYILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGTCE 209
Query: 383 IEVVD-----SEAHDGIFDRFFDALGSGNKEAIADAEEGGDDQEFERVVTKEVSLSEISD 437
+ V+ ++A G F FF ++ D +D+ + +T+ + +
Sbjct: 210 VATVEDGKLMADADSGEFWGFFGGFAPLPRKTAND-----EDKTYNSDITRLFCVEK--G 262
Query: 438 KTGSIRITRLPAPLKKEQLNTDECYVLDTGSYSGIYVWVGRGSNLKEKAEAMNRAEQYLK 497
+ + LK+E L+T++CY+LD G ++VW+GR ++L ++ A AE+ ++
Sbjct: 263 QANPVE----GDTLKREMLDTNKCYILDCG--IEVFVWMGRTTSLDDRKIASKAAEEMIR 316
Query: 498 YHDYPAWVHVSKVPEGAEPIPFKQYFEDW 526
+ P + ++ EG E +PF+ FE W
Sbjct: 317 SSERPK-SQMIRIIEGFETVPFRSKFESW 344
Score = 43.2 bits (97), Expect = 4e-04
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 30/208 (14%)
Query: 327 KVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRADIEVV 386
+V P SLN+ +IL D +F + G + ++ A + IK + RA E
Sbjct: 536 QVDPVAASLNSSYYYILHNDSSVFTWAGNLSTATDQELAERQLDLIK-PNQQSRAQKEGS 594
Query: 387 DSEAHDGIFDRFFDALGSGNKEAIAD---AEEGGDDQEFERVVTKEVSLSEISDKTGSIR 443
+SE +F++ LG G E + E D F TKEV ++
Sbjct: 595 ESE-------QFWELLG-GKAEYSSQKLTKEPERDPHLFSCTFTKEV-----------LK 635
Query: 444 ITRLPAPLKKEQLNTDECYVLDTGSYSGIYVWVGRGSNLKEKAEAMNRAEQYLK----YH 499
+T + ++ L T++ +++D +S I+VWVG+ K K A+ E++++
Sbjct: 636 VTEI-YNFTQDDLMTEDIFIID--CHSEIFVWVGQEVVPKNKLLALTIGEKFIEKDSLLE 692
Query: 500 DYPAWVHVSKVPEGAEPIPFKQYFEDWN 527
+ + EG EP F ++F W+
Sbjct: 693 KLSPEAPIYVIMEGGEPSFFTRFFTSWD 720
Score = 41.5 bits (93), Expect = 0.001
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 3 EVHQAFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHF 62
E Q F D L++WR+ + FYSGD Y+ + +++ I
Sbjct: 382 EEPQVFIDC--TGNLQVWRVNGQAKTLLQAADHSKFYSGDCYVFQYSYPGEEKEEVLIGT 439
Query: 63 WLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYF 110
W G ++ ++E G+A V++ + + + + YE KE +++F
Sbjct: 440 WFGKQSVEEERGSA----VSMASKMVESMKFVPAQARIYEGKEPIQFF 483
Score = 37.1 bits (82), Expect = 0.029
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 139 TELLIRETFPAIRYLKGGHASGFSHVTINEGTEKRLFQIKGKRNVRVKQVSCTRTYI--D 196
TE + P I +GG ASGF HV E RLF +GK V VK+V R+ + D
Sbjct: 107 TEKFLSYFKPCIIPQEGGVASGFKHVVAEEHI-TRLFVCRGKHVVHVKEVPFARSSLNHD 165
Query: 197 PTYI 200
YI
Sbjct: 166 DIYI 169
Score = 35.9 bits (79), Expect = 0.066
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 331 TFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDH-----NGRADIEV 385
T + L D FI+D +IFV+VG++ ++ A+T+ + ++D + A I V
Sbjct: 643 TQDDLMTEDIFIIDCHSEIFVWVGQEVVPKNKLLALTIGEKFIEKDSLLEKLSPEAPIYV 702
Query: 386 VDSEAHDGIFDRFFDALGS 404
+ F RFF + S
Sbjct: 703 IMEGGEPSFFTRFFTSWDS 721
>At2g29890.1 68415.m03630 villin 1 (VLN1) nearly identical to villin
1 (VLN1) [Arabidopsis thaliana] GI:3415113
Length = 909
Score = 87.0 bits (206), Expect = 3e-17
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 14/217 (6%)
Query: 315 VDIVLCSSVFVSKVKPT---FESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQ 371
V ++ C V +VK SLN+ D FILD ++F+F G + E+ KA+ V
Sbjct: 138 VTLLRCKGDHVVRVKEVPFLRSSLNHDDVFILDTASKVFLFAGCNSSTQEKAKAMEVVEY 197
Query: 372 IKDQDHNGRADIEVVDSEAHDGIFD--RFFDALGSGNKEAIADAEEGGDDQEFERVVTKE 429
IKD H+GR ++ ++ G D F+ G A + E+ T
Sbjct: 198 IKDNKHDGRCEVATIEDGKFSGDSDAGEFWSFFG-----GYAPIPKLSSSTTQEQTQTPC 252
Query: 430 VSLSEISDKTGSIRITRLPAPLKKEQLNTDECYVLDTGSYSGIYVWVGRGSNLKEKAEAM 489
L I D G++ T + L K+ L ++CY+LD +S ++VW+GR ++L E+ ++
Sbjct: 253 AELFWI-DTKGNLHPTG-TSSLDKDMLEKNKCYMLD--CHSEVFVWMGRNTSLTERKTSI 308
Query: 490 NRAEQYLKYHDYPAWVHVSKVPEGAEPIPFKQYFEDW 526
+ +E++L+ + + EG E F+ +F W
Sbjct: 309 SSSEEFLRKEGRSTTTSLVLLTEGLENARFRSFFNKW 345
Score = 85.0 bits (201), Expect = 1e-16
Identities = 43/111 (38%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
Query: 3 EVHQAFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDK-DRLTWDIH 61
++ AF G K GLEIW + N + +++PK+ FG F+SG++Y+VL T K + +DIH
Sbjct: 7 DIDSAFQGVGTKSGLEIWCVYNKQLISIPKSSFGKFHSGNAYLVLRTFLRKIESPQYDIH 66
Query: 62 FWLGSRTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSP 112
+WLG ++ ++ A+ ++L D VQ+REVQ E+++FL YF P
Sbjct: 67 YWLGIDANEVDSILASDKALDL-DAALGCCTVQYREVQGQETEKFLSYFKP 116
Score = 42.3 bits (95), Expect = 8e-04
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 453 KEQLNTDECYVLDTGSYSGIYVWVGRGSNLKEKAEAMNRAEQYLKY----HDYPAWVHVS 508
++ L T++ ++LD S +YVW+G SN+K K EA+ ++L+ V
Sbjct: 641 QDDLTTEDVFLLDC--QSEVYVWIGSNSNIKSKEEALTLGLKFLEMDILEEGLTMRTPVY 698
Query: 509 KVPEGAEPIPFKQYFE 524
V EG EP F ++FE
Sbjct: 699 VVTEGHEPPFFTRFFE 714
Score = 31.9 bits (69), Expect = 1.1
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 320 CSSVFVSKVKPTF----ESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQ 375
CSS V KVK + + L D F+LD +++V++G + + +A+T+ + +
Sbjct: 626 CSSD-VLKVKEIYNFVQDDLTTEDVFLLDCQSEVYVWIGSNSNIKSKEEALTLGLKFLEM 684
Query: 376 D--HNG---RADIEVVDSEAHDGIFDRFFD 400
D G R + VV F RFF+
Sbjct: 685 DILEEGLTMRTPVYVVTEGHEPPFFTRFFE 714
Score = 29.5 bits (63), Expect = 5.8
Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Query: 14 KPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHFWLGSRTSQDEA 73
+ L++WR++ + + ++GD Y+V K+R ++ W+G + Q +
Sbjct: 388 RDNLKVWRVDGDDVSLLSIPDQTKLFTGDCYLVQYKYTYKERTEHLLYVWIGCESIQQDR 447
Query: 74 GAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYF 110
A AI + +G +V Q E F F
Sbjct: 448 -ADAITNASAIVGTTKGESVLCHIYQGNEPSRFFPMF 483
>At1g63130.1 68414.m07134 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 630
Score = 50.8 bits (116), Expect = 2e-06
Identities = 37/162 (22%), Positives = 69/162 (42%)
Query: 200 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 259
I+P V+ Y TI LC+ + + T+ D I+P V+ Y ++ LC+ +S
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 260 RAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVL 319
R +D I P V+ ++ + + + + + I P + Y+++
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 320 CSSVFVSKVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVE 361
C + + K FE + + DCF V + + KAK V+
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
>At1g62930.1 68414.m07105 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 659
Score = 50.8 bits (116), Expect = 2e-06
Identities = 38/162 (23%), Positives = 69/162 (42%)
Query: 200 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 259
I+ V+ YTTI LC+ + + T+ D I+P V+ Y ++ LC+ +S
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 260 RAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVL 319
R +D I P V+ ++ + + + + + I P + Y+++
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 320 CSSVFVSKVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVE 361
C + + K FE + + DCF V + + KAK VE
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
>At1g62910.1 68414.m07103 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1133
Score = 46.8 bits (106), Expect = 4e-05
Identities = 37/162 (22%), Positives = 68/162 (41%)
Query: 200 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 259
I+ V+ Y TI LC + + T+ D I+P V Y+++ + LC+ +S
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313
Query: 260 RAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVL 319
R +D I P V+ ++ + + + + + I P + Y+++
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 320 CSSVFVSKVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVE 361
C + + K FE + + DCF V + + KAK VE
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Score = 39.5 bits (88), Expect = 0.005
Identities = 30/163 (18%), Positives = 67/163 (41%)
Query: 200 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 259
I+ V+ Y+T+ LC + T+ + ++P V+ Y+++ + LC+ +S
Sbjct: 854 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS 913
Query: 260 RAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVL 319
R +D I P ++ ++ + + + + + I P + Y+++
Sbjct: 914 RLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 973
Query: 320 CSSVFVSKVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVER 362
C + + K E + DC V + + KAK V++
Sbjct: 974 CMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 1016
Score = 29.1 bits (62), Expect = 7.6
Identities = 25/144 (17%), Positives = 55/144 (38%)
Query: 193 TYIDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSS 252
T +D I+P V Y+++ + LC+ +SR +D I P V+ ++ +
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 253 VLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYY 312
+ + + + I P + Y+++ C + + P V+ Y
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 401
Query: 313 TTVDIVLCSSVFVSKVKPTFESLN 336
+T+ C + V + F ++
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMS 425
>At1g63400.1 68414.m07170 pentatricopeptide (PPR) repeat-containing
protein contains multiple PPR-repeats Pfam profile:
PF01535
Length = 577
Score = 44.0 bits (99), Expect = 3e-04
Identities = 32/162 (19%), Positives = 68/162 (41%)
Query: 200 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 259
I+ V+ Y+T+ LC + T+ + ++P V+ Y+++ + LC+ +S
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 260 RAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVL 319
R +D I P V+ + + + + + + I P + Y+++
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 320 CSSVFVSKVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVE 361
C + + K FE + + DCF V + + KAK ++
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Score = 36.7 bits (81), Expect = 0.038
Identities = 24/115 (20%), Positives = 49/115 (42%)
Query: 201 QPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSR 260
QP ++ Y + LC I + + I+ V+ Y+T+ LC +
Sbjct: 222 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 281
Query: 261 AQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTV 315
T+ + ++P V+ Y+++ + LC+ +SR +D I P V+ + +
Sbjct: 282 LFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
>At1g62670.1 68414.m07073 pentatricopeptide (PPR) repeat-containing
protein contains multiple PPR repeats Pfam Profile:
PF01535
Length = 630
Score = 42.7 bits (96), Expect = 6e-04
Identities = 29/142 (20%), Positives = 60/142 (42%)
Query: 200 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 259
++P VL Y TI LC + + + + I+P V+ Y+++ + LC+ +S
Sbjct: 252 LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 311
Query: 260 RAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVL 319
R +D I P V ++ + + + + + I P ++ Y+++
Sbjct: 312 RLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
Query: 320 CSSVFVSKVKPTFESLNNGDCF 341
C + + K FE + + CF
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCF 393
>At1g62590.1 68414.m07061 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 634
Score = 42.3 bits (95), Expect = 8e-04
Identities = 34/162 (20%), Positives = 65/162 (40%)
Query: 200 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 259
I+ V+ + TI LC + + + + I+P V+ Y+++ + LCS +S
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 260 RAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVL 319
+ +D I P ++ + + + + D I P + Y ++
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 320 CSSVFVSKVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVE 361
C + K K FE + + DCF V + + K+K VE
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417
>At1g63330.1 68414.m07159 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 558
Score = 41.9 bits (94), Expect = 0.001
Identities = 29/142 (20%), Positives = 57/142 (40%)
Query: 200 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 259
I+ V+ + TI LC + + + + I+P V+ Y+++ + LCS +S
Sbjct: 180 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 239
Query: 260 RAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVL 319
+ +D I P ++ + + + + D I P + Y ++
Sbjct: 240 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 299
Query: 320 CSSVFVSKVKPTFESLNNGDCF 341
C + K K FE + + DCF
Sbjct: 300 CMHDRLDKAKQMFEFMVSKDCF 321
Score = 33.9 bits (74), Expect = 0.27
Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 1/130 (0%)
Query: 201 QPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSR 260
QP ++ Y + LC I + + I+ V+ + TI LC + +
Sbjct: 146 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 205
Query: 261 AQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPR-VLYYTTVDIVL 319
+ + I+P V+ Y+++ + LCS +S+ +D I P V + +D +
Sbjct: 206 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 265
Query: 320 CSSVFVSKVK 329
FV K
Sbjct: 266 KEGKFVEAEK 275
>At1g62680.1 68414.m07074 pentatricopeptide (PPR) repeat-containing
protein contains multiple PPR repeats Pfam Profile:
PF01535
Length = 542
Score = 40.7 bits (91), Expect = 0.002
Identities = 37/182 (20%), Positives = 74/182 (40%), Gaps = 1/182 (0%)
Query: 180 KRNVRVKQVSCTRTYIDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRV 239
+RN VS ++ Y +P ++ Y I LC + + + + + I+P V
Sbjct: 161 RRNRVSDAVSLVDKMVEIGY-KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNV 219
Query: 240 LYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTD 299
+ YT + LC+S ++R +D I P V+ Y+ + + + + +
Sbjct: 220 VTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEE 279
Query: 300 TDPTYIQPRVLYYTTVDIVLCSSVFVSKVKPTFESLNNGDCFILDVDHQIFVFVGEKAKG 359
I P ++ Y+++ LC + + F+ + + C V + + KAK
Sbjct: 280 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR 339
Query: 360 VE 361
VE
Sbjct: 340 VE 341
>At1g64580.1 68414.m07320 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587; contains Pfam profile PF01535: PPR
repeat
Length = 1052
Score = 39.5 bits (88), Expect = 0.005
Identities = 29/141 (20%), Positives = 57/141 (40%)
Query: 201 QPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSR 260
+P V+ Y T+ LC + + + + + + V+ Y T+ T LC S ++R
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 261 AQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVLC 320
D I P V+ +T + V + + + + + P + Y ++ LC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 321 SSVFVSKVKPTFESLNNGDCF 341
+ K TF+ + + CF
Sbjct: 293 MHGRLYDAKKTFDLMASKGCF 313
>At1g63080.1 68414.m07126 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 614
Score = 38.7 bits (86), Expect = 0.009
Identities = 27/141 (19%), Positives = 59/141 (41%)
Query: 200 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 259
I+ V+ Y+T+ LC + + T+ D I+P V Y+++ + LC+ +S
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295
Query: 260 RAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVL 319
R +D I P V+ + ++ + + + + I P ++ Y ++
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 320 CSSVFVSKVKPTFESLNNGDC 340
C + + + F + + DC
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDC 376
Score = 29.5 bits (63), Expect = 5.8
Identities = 24/130 (18%), Positives = 51/130 (39%)
Query: 193 TYIDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSS 252
T +D I+P V Y+++ + LC+ +SR +D I P V+ + ++
Sbjct: 264 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE 323
Query: 253 VLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYY 312
+ + + + I P ++ Y ++ C + + + T P V+ Y
Sbjct: 324 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Query: 313 TTVDIVLCSS 322
T+ C +
Sbjct: 384 NTLINGFCKA 393
>At2g02150.1 68415.m00151 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1141
Score = 38.3 bits (85), Expect = 0.012
Identities = 29/173 (16%), Positives = 67/173 (38%), Gaps = 2/173 (1%)
Query: 201 QPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSR 260
+P V+ Y + C +P + ++P V+ Y+T+ C ++ + +
Sbjct: 197 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 256
Query: 261 AQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVLC 320
D + P YT++ C + + R + ++ V+ YT + LC
Sbjct: 257 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 316
Query: 321 SSVFVSKVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIK 373
+ + + + F ++ + + KAK ++R A+ + N++K
Sbjct: 317 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR--ALELLNELK 367
Score = 29.5 bits (63), Expect = 5.8
Identities = 19/116 (16%), Positives = 44/116 (37%)
Query: 200 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 259
++P V+ Y+T+ C ++ + + D + P YT++ C + +
Sbjct: 231 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 290
Query: 260 RAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTV 315
R + ++ V+ YT + LC + + + D + P + Y +
Sbjct: 291 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 346
>At5g41170.1 68418.m05004 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 527
Score = 36.7 bits (81), Expect = 0.038
Identities = 29/142 (20%), Positives = 53/142 (37%)
Query: 200 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 259
I+P V+ YTTI LC + + + + I+P V+ YT++ LC+S +
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 260 RAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVL 319
I+P V+ + + + + I P + YT++
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 320 CSSVFVSKVKPTFESLNNGDCF 341
C V + + F + CF
Sbjct: 293 CMEGCVDEARQMFYLMETKGCF 314
>At5g16640.1 68418.m01948 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 504
Score = 36.7 bits (81), Expect = 0.038
Identities = 33/161 (20%), Positives = 64/161 (39%)
Query: 201 QPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSR 260
+P V+ Y TI LC S + ++ + I P V+ Y ++ + LCSS ++R
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 261 AQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVLC 320
+ I P V + + + + + + P ++ Y+ + LC
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 321 SSVFVSKVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVE 361
+ + + F + + CF V + I + K+K VE
Sbjct: 303 MYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
>At1g05670.1 68414.m00588 UDP-glucoronosyl/UDP-glucosyl transferase
family protein similar to UDP-glucose:salicylic acid
glucosyltransferase [Nicotiana tabacum] GI:7385017;
contains Pfam profiles PF00201: UDP-glucoronosyl and
UDP-glucosyl transferase, PF01535: PPR repeat
Length = 1184
Score = 36.7 bits (81), Expect = 0.038
Identities = 26/136 (19%), Positives = 54/136 (39%)
Query: 200 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 259
++P + +T + C + + + R P V+ YTT+ LC + S++
Sbjct: 860 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 919
Query: 260 RAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVL 319
+ +QP + Y +I LC S I + + + + + + YTT+
Sbjct: 920 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 979
Query: 320 CSSVFVSKVKPTFESL 335
C S + K + + +
Sbjct: 980 CKSGEMDKAQEILKEM 995
Score = 31.1 bits (67), Expect = 1.9
Identities = 22/86 (25%), Positives = 37/86 (43%)
Query: 200 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 259
++P Y +I +LC + + A ++ I P + YTT+ C I ++S
Sbjct: 755 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 814
Query: 260 RAQTDTDPTYIQPRVLYYTTIDTVLC 285
+ + I P VL YT I + C
Sbjct: 815 KFFYEMHSRDITPDVLTYTAIISGFC 840
Score = 29.5 bits (63), Expect = 5.8
Identities = 21/86 (24%), Positives = 36/86 (41%)
Query: 235 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 294
++P Y +I +LC + + A ++ I P + YTT+ C I ++S
Sbjct: 755 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 814
Query: 295 RAQTDTDPTYIQPRVLYYTTVDIVLC 320
+ + I P VL YT + C
Sbjct: 815 KFFYEMHSRDITPDVLTYTAIISGFC 840
>At4g26800.1 68417.m03860 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 369
Score = 35.5 bits (78), Expect = 0.088
Identities = 27/136 (19%), Positives = 56/136 (41%)
Query: 200 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 259
I+P ++ +++ C S I + + I+ V+ T + LC + L+ +
Sbjct: 9 IEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 68
Query: 260 RAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVL 319
I P V+ Y+++ T LC S + + R + D I P V+ ++ +
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 320 CSSVFVSKVKPTFESL 335
+SKV ++ +
Sbjct: 129 AKRGKLSKVDSVYKMM 144
>At5g46100.1 68418.m05668 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 472
Score = 35.1 bits (77), Expect = 0.12
Identities = 27/130 (20%), Positives = 51/130 (39%)
Query: 207 YTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTD 266
Y T+ + LC I + + T+ P V+ YT++ LC S + + R +
Sbjct: 195 YGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMK 254
Query: 267 PTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVLCSSVFVS 326
I+P V Y+++ LC + +P ++ YTT+ LC +
Sbjct: 255 SKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQ 314
Query: 327 KVKPTFESLN 336
+ + +N
Sbjct: 315 EAVELLDRMN 324
Score = 32.3 bits (70), Expect = 0.82
Identities = 21/84 (25%), Positives = 36/84 (42%)
Query: 202 PRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRA 261
P V+ YT++ LC S + + R + I+P V Y+++ LC +
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 262 QTDTDPTYIQPRVLYYTTIDTVLC 285
+P ++ YTT+ T LC
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGLC 308
Score = 31.5 bits (68), Expect = 1.4
Identities = 23/99 (23%), Positives = 40/99 (40%)
Query: 242 YTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTD 301
Y T+ + LC I + + T+ P V+ YT++ LC S + + R +
Sbjct: 195 YGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMK 254
Query: 302 PTYIQPRVLYYTTVDIVLCSSVFVSKVKPTFESLNNGDC 340
I+P V Y+++ LC + FE + C
Sbjct: 255 SKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGC 293
>At1g79540.1 68414.m09272 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 780
Score = 34.7 bits (76), Expect = 0.15
Identities = 24/123 (19%), Positives = 46/123 (37%)
Query: 200 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 259
I+P ++ YT + L + I + + + I P Y + LC L+
Sbjct: 334 IKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGR 393
Query: 260 RAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVL 319
Q + T P +T + +C + L+ + T+ + + P V + + L
Sbjct: 394 SLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGL 453
Query: 320 CSS 322
C S
Sbjct: 454 CKS 456
Score = 31.5 bits (68), Expect = 1.4
Identities = 20/106 (18%), Positives = 38/106 (35%)
Query: 235 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 294
I+P ++ YT + L + I + + + I P Y + LC L+
Sbjct: 334 IKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGR 393
Query: 295 RAQTDTDPTYIQPRVLYYTTVDIVLCSSVFVSKVKPTFESLNNGDC 340
Q + T P +T + +C + V + + F + C
Sbjct: 394 SLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGC 439
>At1g13040.1 68414.m01512 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 517
Score = 34.3 bits (75), Expect = 0.20
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 8/121 (6%)
Query: 270 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVLCSSVFVSKVK 329
+ P ++YTTI LC S + + D I P + Y ++ LC S V++
Sbjct: 391 LSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAI 450
Query: 330 PTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQ--DHNGRADIEVVD 387
FE + +C D F F+ G+ R K ++ A ++ DQ D D +V D
Sbjct: 451 KLFEDMKGKECC---PDELTFKFI---IGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSD 504
Query: 388 S 388
+
Sbjct: 505 T 505
>At1g06580.1 68414.m00697 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 500
Score = 34.3 bits (75), Expect = 0.20
Identities = 36/172 (20%), Positives = 69/172 (40%), Gaps = 1/172 (0%)
Query: 201 QPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSR 260
+P V+ Y TI LC + ++ I+P V+ Y ++ T L S S+R
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 261 AQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVLC 320
+D I P V+ ++ + V + + + + + P ++ Y ++ LC
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 321 SSVFVSKVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGV-ERMKAITVANQ 371
+ + K L + F V + + KAK V + MK + V ++
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSR 352
>At3g48810.1 68416.m05330 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 659
Score = 33.9 bits (74), Expect = 0.27
Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 5/122 (4%)
Query: 201 QPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSR 260
+P V Y + LC + + + + + P + YTT+ + +C L+ R
Sbjct: 178 EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLV-KEGR 236
Query: 261 AQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVLC 320
+ +P V Y + LC + + I P V+ Y+T+ VLC
Sbjct: 237 ELAER----FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLC 292
Query: 321 SS 322
+S
Sbjct: 293 NS 294
>At1g63150.1 68414.m07137 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 629
Score = 33.5 bits (73), Expect = 0.35
Identities = 25/115 (21%), Positives = 48/115 (41%)
Query: 201 QPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSR 260
QP ++ Y T+ LC I + + I+ V+ + TI LC + +
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVD 279
Query: 261 AQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTV 315
T+ + I+P V+ Y ++ LC+ +SR ++ I P V+ + +
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Score = 33.5 bits (73), Expect = 0.35
Identities = 26/141 (18%), Positives = 55/141 (39%)
Query: 200 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 259
I+ V+ + TI LC + + T+ + I+P V+ Y ++ LC+ +S
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Query: 260 RAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVL 319
R ++ I P V+ + + + + + + I P + Y +
Sbjct: 314 RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373
Query: 320 CSSVFVSKVKPTFESLNNGDC 340
C + + K F+ + + DC
Sbjct: 374 CMHNRLDEAKQMFKFMVSKDC 394
Score = 29.1 bits (62), Expect = 7.6
Identities = 20/86 (23%), Positives = 37/86 (43%)
Query: 236 QPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSR 295
QP ++ Y T+ LC I + + I+ V+ + TI LC + +
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVD 279
Query: 296 AQTDTDPTYIQPRVLYYTTVDIVLCS 321
T+ + I+P V+ Y ++ LC+
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCN 305
>At1g20300.1 68414.m02534 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535 PPR repeat
Length = 537
Score = 33.1 bits (72), Expect = 0.47
Identities = 38/165 (23%), Positives = 68/165 (41%), Gaps = 10/165 (6%)
Query: 217 SVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSR------AQT--DTDPT 268
++LI RA ++ + R+ Y + + S++I + SR AQ+ D+
Sbjct: 190 TILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKD 249
Query: 269 YIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVLCSSVFVSKV 328
+P V+ YT + C + I + + + I+P V Y+ V LC +S+
Sbjct: 250 RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRA 309
Query: 329 KPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIK 373
F + + C + + V KA E K + V NQ+K
Sbjct: 310 HDVFADMLDSGCAPNAITFNNLMRVHVKAGRTE--KVLQVYNQMK 352
>At1g02060.1 68414.m00126 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 710
Score = 33.1 bits (72), Expect = 0.47
Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 3/121 (2%)
Query: 198 TY-IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLC--SSVL 254
TY + P + T+ C + ++ + R D + + P V+ Y TI LC V
Sbjct: 202 TYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVK 261
Query: 255 IPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTT 314
I + + T + P V+ YTT+ C I + D ++P + Y T
Sbjct: 262 IAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNT 321
Query: 315 V 315
+
Sbjct: 322 L 322
>At5g59900.1 68418.m07512 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 907
Score = 32.7 bits (71), Expect = 0.62
Identities = 28/146 (19%), Positives = 59/146 (40%)
Query: 200 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 259
++P V+ YT++ CS I + R + I P + +TT+ + L + LI +
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 260 RAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVL 319
+ + ++P + Y + C + + + I P Y + L
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 320 CSSVFVSKVKPTFESLNNGDCFILDV 345
C + S+ K + L+ G+C + ++
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEI 613
>At1g09900.1 68414.m01114 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 598
Score = 32.7 bits (71), Expect = 0.62
Identities = 24/136 (17%), Positives = 51/136 (37%)
Query: 187 QVSCTRTYIDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTID 246
+++ + +D + P V+ Y TI LC S + + P V+ YT +
Sbjct: 187 EINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILI 246
Query: 247 TVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQ 306
C + + + + P V+ Y + +C + + + D + Q
Sbjct: 247 EATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ 306
Query: 307 PRVLYYTTVDIVLCSS 322
P V+ + + +CS+
Sbjct: 307 PNVITHNIILRSMCST 322
Score = 29.1 bits (62), Expect = 7.6
Identities = 23/139 (16%), Positives = 48/139 (34%)
Query: 202 PRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRA 261
P V+ YT + C + + + + P V+ Y + +C + + +
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 262 QTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVLCS 321
D + QP V+ + I +CS+ + + D P V+ + + LC
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 322 SVFVSKVKPTFESLNNGDC 340
+ + E + C
Sbjct: 357 KGLLGRAIDILEKMPQHGC 375
>At4g00450.1 68417.m00062 expressed protein
Length = 2124
Score = 31.1 bits (67), Expect = 1.9
Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 157 HASGFSHVTINEGTEKRLFQIKG-KRNVRVKQVSCTRTYIDPTYI---QPRVLYYTTIDT 212
++S H+T N+ +KR F+I + +++ S +R + P + P V Y T +
Sbjct: 1713 NSSSSDHITANKAGKKRKFEITSIEEGEVIEEGSGSRKVLLPRVLDENSPSVGYGITTER 1772
Query: 213 VLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDT 265
VL P ++ ++ T++ V ++ I+ L S ++S Q T
Sbjct: 1773 AFVQLVL-PCIDQSSDESRSTFVNELVRQFSNIEQQLSSVTNRSTTSNKQMGT 1824
>At3g46750.1 68416.m05075 hypothetical protein
Length = 415
Score = 31.1 bits (67), Expect = 1.9
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 373 KDQDHNGRADIEVVDSEAHDGIFDRFFDALGSGNKEAIADA-EEGGDDQEFERVVTKEVS 431
++++ N A+I + G + +D G KE I+ E DD+E RV++K +S
Sbjct: 280 REEEVNDVAEINTAGTNQPTGFNTKVWDK-GVSMKEYISQKFEPSEDDRELSRVISKAIS 338
Query: 432 LSEISDKTGSIRITRLPAP 450
+ S +T S AP
Sbjct: 339 PRKGSSQTSSFGAATNMAP 357
>At5g65560.1 68418.m08249 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 915
Score = 30.3 bits (65), Expect = 3.3
Identities = 24/121 (19%), Positives = 40/121 (33%)
Query: 202 PRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRA 261
P V YT + LC S + + + T I+P + YT + LCS +
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 262 QTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVLCS 321
+ P V+ Y + C +I + + + P Y + C
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 322 S 322
S
Sbjct: 441 S 441
>At4g26680.1 68417.m03844 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 521
Score = 30.3 bits (65), Expect = 3.3
Identities = 24/130 (18%), Positives = 48/130 (36%)
Query: 207 YTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTD 266
Y T+ C L+ S+ + + + +QP V+ + T+ C ++ + +S+ +
Sbjct: 276 YNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMK 335
Query: 267 PTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVLCSSVFVS 326
+ P + Y T+ + R D IQ +L Y + LC
Sbjct: 336 AVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 327 KVKPTFESLN 336
K + L+
Sbjct: 396 KAAQFVKELD 405
>At2g15980.1 68415.m01829 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 498
Score = 30.3 bits (65), Expect = 3.3
Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 18/133 (13%)
Query: 272 PRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVLCSSVFVSKVKP- 330
P V Y + C+ L+ + + + + ++ Y T+ LCS+ V K K
Sbjct: 279 PNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKEL 338
Query: 331 --------------TFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKD-- 374
T+E L NG C DVD + V+ K KG E +T+ ++
Sbjct: 339 FRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFE-ADGLTIEALVEGLC 397
Query: 375 QDHNGRADIEVVD 387
D +G+ +E D
Sbjct: 398 DDRDGQRVVEAAD 410
>At3g07290.1 68416.m00868 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile: PF01535: PPR repeat
Length = 880
Score = 29.9 bits (64), Expect = 4.4
Identities = 26/120 (21%), Positives = 41/120 (34%)
Query: 201 QPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSR 260
QP YT + LC LI + + P +P V YT + LC I ++
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG 357
Query: 261 AQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVLC 320
I P V+ Y + C + + T + +P V + + LC
Sbjct: 358 VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417
>At3g03650.1 68416.m00368 exostosin family protein contains Pfam
profile: PF03016 Exostosin family
Length = 499
Score = 29.9 bits (64), Expect = 4.4
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 370 NQIKDQDHNGRADIEVVDSEAHDGIFDRFFDALGSGNKEAIADAEEGGDDQEFERVVTKE 429
+++ + + RA I V +S D +F FF +L + ++ D+E + V K
Sbjct: 179 SELPEDSRSSRAAIRVKNSSEADVVFVPFFSSLSYNRFSKVNQKQKKSQDKELQENVVKY 238
Query: 430 VS 431
V+
Sbjct: 239 VT 240
>At1g62720.1 68414.m07079 pentatricopeptide (PPR) repeat-containing
protein contains multiple PPR repeats Pfam Profile:
PF01535
Length = 426
Score = 29.9 bits (64), Expect = 4.4
Identities = 26/140 (18%), Positives = 50/140 (35%)
Query: 201 QPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSR 260
+P V+ Y TI C L+ + + ++ + Y ++ LC S ++R
Sbjct: 112 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 171
Query: 261 AQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVLC 320
D I P V+ +T + V + + + + P V Y ++ LC
Sbjct: 172 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 231
Query: 321 SSVFVSKVKPTFESLNNGDC 340
V + K + + C
Sbjct: 232 MHGRVDEAKQMLDLMVTKGC 251
>At1g14710.2 68414.m01759 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 601
Score = 29.9 bits (64), Expect = 4.4
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 355 EKAKGVERMKAITVANQIKDQDHNGRADIEV----VDSEAHDGIFDRFFDALGSGNKEAI 410
E+AK +KA++VA + +D R+D +V +SE + I GS + I
Sbjct: 165 EEAKLASDVKALSVAEEKRDGSEKPRSDSKVEKKLEESETQEEIVKNHKCNSGSKDNSLI 224
Query: 411 ADAEEGGDDQEFERVVTKEVSLSEISD 437
++ ++ +D+E + K + E+ D
Sbjct: 225 SEQKQEENDKECPASMAKTFVVQEMYD 251
>At1g14710.1 68414.m01758 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 601
Score = 29.9 bits (64), Expect = 4.4
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 355 EKAKGVERMKAITVANQIKDQDHNGRADIEV----VDSEAHDGIFDRFFDALGSGNKEAI 410
E+AK +KA++VA + +D R+D +V +SE + I GS + I
Sbjct: 165 EEAKLASDVKALSVAEEKRDGSEKPRSDSKVEKKLEESETQEEIVKNHKCNSGSKDNSLI 224
Query: 411 ADAEEGGDDQEFERVVTKEVSLSEISD 437
++ ++ +D+E + K + E+ D
Sbjct: 225 SEQKQEENDKECPASMAKTFVVQEMYD 251
>At1g13800.1 68414.m01620 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 883
Score = 29.9 bits (64), Expect = 4.4
Identities = 24/105 (22%), Positives = 40/105 (38%), Gaps = 1/105 (0%)
Query: 235 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 294
++P V YYT + C + + R + + P YT + C + +
Sbjct: 757 VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAK 816
Query: 295 RAQTDTDPTYIQPRVLYYTTVDIVLCSSVFVSK-VKPTFESLNNG 338
+ ++P V+ YT + C + FV K VK E L G
Sbjct: 817 MIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKG 861
>At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest
subunit (RPB205) (RPII) (RPB1) nearly identical to
P|P18616 DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) {Arabidopsis thaliana}
Length = 1840
Score = 29.5 bits (63), Expect = 5.8
Identities = 32/142 (22%), Positives = 49/142 (34%)
Query: 197 PTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIP 256
P Y Y T T SS +S A + T P+Y Y T + +S
Sbjct: 1564 PGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1623
Query: 257 SSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVD 316
+S + + T P+Y Y T +S +S + + T P+Y Y T
Sbjct: 1624 PTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Query: 317 IVLCSSVFVSKVKPTFESLNNG 338
+S S P + + G
Sbjct: 1684 SYSPTSPSYSPTSPAYSPTSPG 1705
>At4g05150.1 68417.m00773 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein various predicted proteins
contains Pfam profile PF00564: PB1 domain
Length = 477
Score = 29.5 bits (63), Expect = 5.8
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 373 KDQDHNGRADIEVVDSEAHDGIFDRFFDALGSGNKEAIADAEEGGDDQEFERVVTKEVSL 432
+D D + ++DS + + F DAL G+ A GG + FERV ++ S+
Sbjct: 169 EDNDSRASSISSLLDSSVNREQW--FLDALNLGSSAAATAVSNGGSGRVFERVRSEVSSI 226
Query: 433 -SEISD 437
SE+ D
Sbjct: 227 VSEVPD 232
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 29.5 bits (63), Expect = 5.8
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 405 GNKEAIADAEEGGDDQEFERVVTKEVSLSEISDKTGSIRITRLPAPLKKEQLNTDE 460
G+ E + DAE+GG+ +E + S++E D +++ R P+ ++K++ DE
Sbjct: 1054 GDLEDLLDAEDGGEGEESNK------SMNEKLDGVKGLKMRRWPSQVEKDEEIEDE 1103
>At3g04760.1 68416.m00512 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 602
Score = 29.5 bits (63), Expect = 5.8
Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 4/164 (2%)
Query: 202 PRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRA 261
P ++ Y T+ LC + + P Y T+ + L SS +
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460
Query: 262 QTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVLCS 321
+ I P + Y ++ + LC ++ + D P V+ Y V + C
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCK 520
Query: 322 SVFVSKVKPTFESLNNGDCFILDVDHQIFV----FVGEKAKGVE 361
+ + ES+ C + + + + F G +A+ +E
Sbjct: 521 AHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 564
>At2g13370.1 68415.m01476 chromodomain-helicase-DNA-binding family
protein / CHD family protein similar to SP|O14647
Chromodomain-helicase-DNA-binding protein 2 (CHD-2)
{Homo sapiens}; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00385: 'chromo' (CHRromatin
Organization MOdifier)
Length = 1722
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 374 DQDHNGRADIEVVDSEAHDGIFDRFFDALGSGNKEAIADAE-EGGDDQEFERVVTKEVSL 432
+ DHNG AD++ + E D D F+ + + + +G D + + +E+ L
Sbjct: 232 NHDHNGDADMDYEEEEDEDDPEDADFEPYDAADDGGASKKHGQGWDVSDEDPESDEEIDL 291
Query: 433 SEISDKTGS 441
S+ D G+
Sbjct: 292 SDYEDDYGT 300
>At1g63230.1 68414.m07147 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 323
Score = 29.5 bits (63), Expect = 5.8
Identities = 27/146 (18%), Positives = 53/146 (36%)
Query: 195 IDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVL 254
++ T+I+ V+ Y I LC + T+ I P V+ Y+ + C S
Sbjct: 67 MEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGR 126
Query: 255 IPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTT 314
+ + D I P V+ ++ + L + + D I P + Y +
Sbjct: 127 WTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNS 186
Query: 315 VDIVLCSSVFVSKVKPTFESLNNGDC 340
+ C ++ K +S+ + C
Sbjct: 187 MIDGFCKQDRLNDAKRMLDSMASKSC 212
>At1g63070.1 68414.m07125 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 590
Score = 29.5 bits (63), Expect = 5.8
Identities = 28/138 (20%), Positives = 52/138 (37%), Gaps = 1/138 (0%)
Query: 200 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 259
I+ V+ Y TI LC + + + I+P V Y + + LC+ +S
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Query: 260 RAQTDTDPTYIQPRVLYYTT-IDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIV 318
R +D I P ++++ ID + L+ + + P V+ Y T+
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Query: 319 LCSSVFVSKVKPTFESLN 336
C V + F ++
Sbjct: 366 FCKYKRVEEGMEVFREMS 383
>At1g09820.1 68414.m01104 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 606
Score = 29.5 bits (63), Expect = 5.8
Identities = 23/138 (16%), Positives = 48/138 (34%)
Query: 200 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSS 259
++P V+ Y ++ LC+ I + + +QP ++ Y + C + ++ +
Sbjct: 327 VKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEAL 386
Query: 260 RAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVL 319
P Y + C I + + + I P V Y + L
Sbjct: 387 DMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446
Query: 320 CSSVFVSKVKPTFESLNN 337
C + + K F+ L +
Sbjct: 447 CRNGNIEAAKKLFDQLTS 464
>At4g00930.1 68417.m00126 COP1-interacting protein 4.1 (CIP4.1)
identical to cDNA CIP4.1 mRNA for COP1-interacting
protein 4.1, GI:13160649
Length = 976
Score = 29.1 bits (62), Expect = 7.6
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 356 KAKGVERMKAITVANQIKDQDHNGRADIEVVDSEAHDGIFDRFFDALGSGNKEAIADAEE 415
K K + K + + D I+VVD E HD + D+L N EA + E+
Sbjct: 608 KKKSSRKAKTPAKEDTLVDSGAQNVEPIKVVDGEGHDNVIRNVLDSLQQRN-EAEENMEK 666
Query: 416 GG 417
G
Sbjct: 667 SG 668
>At1g80550.1 68414.m09443 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 448
Score = 29.1 bits (62), Expect = 7.6
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 461 CYVLDTGSYSGIYVWVGRGSNLKEKAEAMNRAEQYL-KYHDYP-AWVHVSKVPEGAEPIP 518
CY D + WV R S + E NR L KY ++ +W ++++ E +P
Sbjct: 56 CYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVP 115
>At1g64100.1 68414.m07261 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 666
Score = 29.1 bits (62), Expect = 7.6
Identities = 26/112 (23%), Positives = 42/112 (37%)
Query: 204 VLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQT 263
V+ Y TI +C S+ + + T+I+P V+ Y+ I LC + +
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 264 DTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTV 315
+ I P V Y + CS + R D I P VL + +
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNAL 372
>At1g22960.1 68414.m02869 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 718
Score = 29.1 bits (62), Expect = 7.6
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 200 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTI 245
I P ++ Y T+ LC S + + R + + I P V+ YTT+
Sbjct: 405 IHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTL 450
Score = 29.1 bits (62), Expect = 7.6
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 235 IQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTI 280
I P ++ Y T+ LC S + + R + + I P V+ YTT+
Sbjct: 405 IHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTL 450
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.135 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,117,909
Number of Sequences: 28952
Number of extensions: 584632
Number of successful extensions: 1707
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 1463
Number of HSP's gapped (non-prelim): 175
length of query: 527
length of database: 12,070,560
effective HSP length: 84
effective length of query: 443
effective length of database: 9,638,592
effective search space: 4269896256
effective search space used: 4269896256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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