Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001754-TA|BGIBMGA001754-PA|IPR007122|Gelsolin,
IPR007123|Gelsolin region
(527 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 116 3e-26
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 65 1e-10
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 65 1e-10
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 42 8e-04
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 36 0.053
Z75542-2|CAA99862.2| 712|Caenorhabditis elegans Hypothetical pr... 35 0.16
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 33 0.37
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 32 0.87
Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical pr... 32 1.1
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 31 1.5
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 31 2.0
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 31 2.0
U64608-4|AAB04595.2| 282|Caenorhabditis elegans Hypothetical pr... 31 2.6
AF099920-3|AAK29845.1| 216|Caenorhabditis elegans Hypothetical ... 30 3.5
AF003134-2|AAB54141.5| 691|Caenorhabditis elegans Hypothetical ... 30 3.5
U40419-8|AAA81428.3| 673|Caenorhabditis elegans Hypothetical pr... 30 4.6
Z81131-6|CAE17977.2| 734|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z81131-5|CAB03422.2| 608|Caenorhabditis elegans Hypothetical pr... 29 6.1
AY241925-2|AAO85273.1| 734|Caenorhabditis elegans chondroitin d... 29 6.1
AY241925-1|AAO85274.1| 736|Caenorhabditis elegans chondroitin d... 29 6.1
AB088398-1|BAC76781.1| 715|Caenorhabditis elegans chondroitin s... 29 6.1
AB088397-1|BAC76780.1| 726|Caenorhabditis elegans chondroitin s... 29 6.1
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 29 8.1
L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical pr... 29 8.1
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 116 bits (280), Expect = 3e-26
Identities = 62/209 (29%), Positives = 120/209 (57%), Gaps = 9/209 (4%)
Query: 322 SVFVSKVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRA 381
+V ++V+ SLN GD FILD+ ++V++ ++ +ER+K + A I D + G
Sbjct: 145 NVRCTEVECEVNSLNLGDVFILDLGKDLYVWMPPESGRLERIKGMARAKNIADHERMGIP 204
Query: 382 DIEVVDSEA--HDGIFDRFFDALGSGNKEAIADAEEGGDDQEFERVVTKEVSLSEISDKT 439
+ ++D +D F +F + S K ++ ++ DD + + +T++++L ++SD +
Sbjct: 205 KVHILDDVEWDNDSTFWSYFGGVSSVRK--VSKGKD--DDDNYWKRLTEQITLWKVSDAS 260
Query: 440 GSIRITRLPAP--LKKEQLNTDECYVLDTGSYSGIYVWVGRGSNLKEKAEAMNRAEQYLK 497
G+ +++ + ++KEQL+ + ++LD + GI+VW+G L+E+++A+ + YLK
Sbjct: 261 GAAKVSMVSQGENIRKEQLDPKDAFILDAIN-GGIFVWIGHECTLEERSKALIWGQNYLK 319
Query: 498 YHDYPAWVHVSKVPEGAEPIPFKQYFEDW 526
H P W V++V E AE F Q+F DW
Sbjct: 320 QHHLPRWTQVTRVLESAESTQFTQWFRDW 348
Score = 103 bits (247), Expect = 3e-22
Identities = 52/104 (50%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
Query: 7 AFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHFWLGS 66
A A+ G+K GL +WRI F VP+ G+FY GD+YI L D WD+HFWLG
Sbjct: 9 ALAEIGKKNGLLVWRINKFVLEPVPEVDHGVFYIGDAYIALYQKYDG---CWDVHFWLGK 65
Query: 67 RTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYF 110
S DE G AAI TV +DD G QHRE+Q YES FL YF
Sbjct: 66 NASTDEIGVAAIKTVEIDD-SLGGIPTQHREIQNYESPLFLSYF 108
Score = 69.3 bits (162), Expect = 6e-12
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 24/199 (12%)
Query: 333 ESLNNGDCFILD-VDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGR-ADIEVVDSEA 390
E L+ D FILD ++ IFV++G + ER KA+ Q H R + V A
Sbjct: 277 EQLDPKDAFILDAINGGIFVWIGHECTLEERSKALIWGQNYLKQHHLPRWTQVTRVLESA 336
Query: 391 HDGIFDRFFDALGSGNKEAIADAEEGGDDQEFERVVTKEVSLSEISDKTGSIRITRLPAP 450
F ++F ++ + D++ + T L ++SD++G + + + A
Sbjct: 337 ESTQFTQWF-------RDWV--------DEKKKNTFTP--LLFQVSDESGLLHVEEI-AN 378
Query: 451 LKKEQLNTDECYVLDTGSYSGIYVWVGRGSNLKEKAEAMNRAEQYLKYHDYPAW--VHVS 508
+E L+ D+ +LD + + IYVWVG +N EK EA+N A+ YL+ P +
Sbjct: 379 FTQEDLDGDDVMILD--ALNSIYVWVGANANANEKKEALNTAKLYLEKDKLPRHKKTAID 436
Query: 509 KVPEGAEPIPFKQYFEDWN 527
+ +G EP FK++F W+
Sbjct: 437 TIFQGKEPPTFKKFFPSWD 455
Score = 43.6 bits (98), Expect = 4e-04
Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 147 FP-AIRYLKGGHASGFSHVTIN-EGTEKRLFQIKGKRNVRVKQVSC 190
FP IRY+ GG+ SG+ HV + + LF KGKRNVR +V C
Sbjct: 108 FPDGIRYVSGGYESGYRHVDDQFKNWKPHLFHCKGKRNVRCTEVEC 153
Score = 33.1 bits (72), Expect = 0.50
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 331 TFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRADIEVVDS 388
T E L+ D ILD + I+V+VG A E+ +A+ A ++D R +D+
Sbjct: 380 TQEDLDGDDVMILDALNSIYVWVGANANANEKKEALNTAKLYLEKDKLPRHKKTAIDT 437
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 64.9 bits (151), Expect = 1e-10
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 10 DAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGD-KDRLTWDIHFWLGSRT 68
D G G+ +W IENF P + + G FY D+Y+VL TT + +L I +WLG
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 69 SQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPE 113
S D+ +A+ V L + + RE E++EFL F E
Sbjct: 563 SLDKGMCSAVHAVGLRN-HLNATCRTQREEMNDETEEFLTLFGEE 606
Score = 61.7 bits (143), Expect = 1e-09
Identities = 52/211 (24%), Positives = 97/211 (45%), Gaps = 14/211 (6%)
Query: 321 SSVFVSKVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGR 380
++V + V + ESL+ CF+LD I+++ G K++ KA A ++ +D G+
Sbjct: 639 TAVEMEPVPLSVESLDPRFCFLLDAGETIWIWSGYKSRITVSNKARLFAERLNKRDRKGK 698
Query: 381 ADIEVVDSEAHDGIFDRFFDALGSGNKEAIADAEEGGDDQEF-ERVVTKEVSLSEISDKT 439
++IE F+ AL +GN D +G + E V + L +++
Sbjct: 699 SEIETCRQARCP---PEFWQAL-TGN----PDKPQGAIVEHVPEGFVAERKKLYKVNIGM 750
Query: 440 GSIRITRLPAP---LKKEQLNTDECYVLDTGSYSGIYVWVGRGSNLKEKAEAMNRAEQYL 496
G + + ++ P K++ L + +VLD S S I++W+G+ +N K +
Sbjct: 751 GFLELPQVELPKGIAKQDMLGSKGVFVLD--SNSDIFLWIGKKANRLLKMAGQKLVVELH 808
Query: 497 KYHDYPAWVHVSKVPEGAEPIPFKQYFEDWN 527
+ D P + V + EG E + F+ F W+
Sbjct: 809 QMIDRPDYAQVYRETEGEESMMFRSKFAGWD 839
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 64.9 bits (151), Expect = 1e-10
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 10 DAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGD-KDRLTWDIHFWLGSRT 68
D G G+ +W IENF P + + G FY D+Y+VL TT + +L I +WLG
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 69 SQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPE 113
S D+ +A+ V L + + RE E++EFL F E
Sbjct: 563 SLDKGMCSAVHAVGLRN-HLNATCRTQREEMNDETEEFLTLFGEE 606
Score = 61.7 bits (143), Expect = 1e-09
Identities = 52/211 (24%), Positives = 97/211 (45%), Gaps = 14/211 (6%)
Query: 321 SSVFVSKVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGR 380
++V + V + ESL+ CF+LD I+++ G K++ KA A ++ +D G+
Sbjct: 639 TAVEMEPVPLSVESLDPRFCFLLDAGETIWIWSGYKSRITVSNKARLFAERLNKRDRKGK 698
Query: 381 ADIEVVDSEAHDGIFDRFFDALGSGNKEAIADAEEGGDDQEF-ERVVTKEVSLSEISDKT 439
++IE F+ AL +GN D +G + E V + L +++
Sbjct: 699 SEIETCRQARCP---PEFWQAL-TGN----PDKPQGAIVEHVPEGFVAERKKLYKVNIGM 750
Query: 440 GSIRITRLPAP---LKKEQLNTDECYVLDTGSYSGIYVWVGRGSNLKEKAEAMNRAEQYL 496
G + + ++ P K++ L + +VLD S S I++W+G+ +N K +
Sbjct: 751 GFLELPQVELPKGIAKQDMLGSKGVFVLD--SNSDIFLWIGKKANRLLKMAGQKLVVELH 808
Query: 497 KYHDYPAWVHVSKVPEGAEPIPFKQYFEDWN 527
+ D P + V + EG E + F+ F W+
Sbjct: 809 QMIDRPDYAQVYRETEGEESMMFRSKFAGWD 839
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 42.3 bits (95), Expect = 8e-04
Identities = 46/179 (25%), Positives = 72/179 (40%), Gaps = 7/179 (3%)
Query: 322 SVFVSKVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQ-DHNGR 380
+V V V P S++ CF++ + + G + +E+ KA + +I + D N
Sbjct: 229 NVDVRLVAPAMSSVHEVACFVVVHQKHLMKYEGLYSNILEKTKASQLCIEILGKSDLNCT 288
Query: 381 AD-IEVVDSEAHDGIFDRFFDALGSGNKEAIADAEEGGDDQEFERVVTK-EVSLSEISDK 438
A+ I V + + F + S + + + + FE V K + L D
Sbjct: 289 AESIVTVTGASRSTLSKLLFCSENSESSSENNNYHQASSVEPFETTVAKLNLVLRIAGDN 348
Query: 439 TGSIRITRLPAPLKKEQLNTDECYVLDTGSYSGIYVWVGRGSNLKEKAEAMNRAEQYLK 497
T R L E + E + D GS IYVW GR SN A A A+Q +K
Sbjct: 349 TAETCSRR--ERLSYEIMKPSEVLIFDFGSE--IYVWTGRYSNKVSSAYAQEYAKQLMK 403
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 36.3 bits (80), Expect = 0.053
Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 208 TTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDP 267
T + TV SS IP S + + PT QP T+ TV SS P+SS AQ + P
Sbjct: 902 TGVSTV-ASSTTIPQGSSSSSPQSPTSAQPAQSSSTSAATVTVSSSQSPTSSPAQQSSTP 960
Query: 268 ------TYIQPRVLYYTTIDTVLCSSVLIPSS-SRAQTDTDPTYIQ 306
T Q T + SS +PS+ + + T PT Q
Sbjct: 961 AGSSTVTVQQSSSFQSPQSTTQIGSSTTVPSTQAPSSTSGGPTTTQ 1006
>Z75542-2|CAA99862.2| 712|Caenorhabditis elegans Hypothetical
protein F55D12.2 protein.
Length = 712
Score = 34.7 bits (76), Expect = 0.16
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 418 DDQEFERVVTKEVSLSEISDKTGSIRITRLPAPLK-KEQLNTDECYVLD-TGSYSGIYVW 475
DDQ+ E +TK S I D+ S + + +K KE+ N+ E + D T S W
Sbjct: 180 DDQKLEEFITKLQSTKRIEDEYASNILKKSVRDVKLKEEENSKEGLIKDHTAGVSDFLDW 239
Query: 476 V-GRG----SNLKEKAEAMNRAEQYLKYHD 500
+ G G ++L + A+ ++ AE +K H+
Sbjct: 240 IEGSGEKWLNSLCQVADNVDEAESLVKQHE 269
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 33.5 bits (73), Expect = 0.37
Identities = 32/141 (22%), Positives = 49/141 (34%), Gaps = 4/141 (2%)
Query: 191 TRTYIDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLC 250
T T PT TT T + P++ +T T PT P TT T
Sbjct: 82 TTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTT---ETTTTPTTTTPTTTT-TTPTTTTT 137
Query: 251 SSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVL 310
+ P+++ +T T PT TT T ++ +++ T T PT
Sbjct: 138 ETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPT 197
Query: 311 YYTTVDIVLCSSVFVSKVKPT 331
TT ++ + PT
Sbjct: 198 TTTTTPTTTTTTPTTTTTVPT 218
Score = 33.1 bits (72), Expect = 0.50
Identities = 27/113 (23%), Positives = 41/113 (36%), Gaps = 1/113 (0%)
Query: 191 TRTYIDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLC 250
T T PT P TT T + P+++ +T T PT TT T
Sbjct: 114 TETTTTPTTTTPTTTT-TTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTT 172
Query: 251 SSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPT 303
++ +++ T T PT TT T ++ ++ T T PT
Sbjct: 173 TTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPT 225
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 32.3 bits (70), Expect = 0.87
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 209 TIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPT 268
TI T + V +PS+++ + T T V TT+ TV + V IPS+ T P+
Sbjct: 253 TISTSPTTVVTVPSTAQTSSTTTVTVPTTTVTGPTTVVTVPTTVVTIPSTVVTSPITTPS 312
Query: 269 YIQPRVLYYTTIDTVLCSSVLIPSS 293
+ V +T+ TV ++V PS+
Sbjct: 313 TV---VTVPSTVVTVPSTAVTKPST 334
Score = 31.5 bits (68), Expect = 1.5
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 220 IPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTT 279
+ +S+ A T + T P TI T + V +PS+++ + T T V TT
Sbjct: 231 VTTSTMATTTANVTSAAPNTT--VTISTSPTTVVTVPSTAQTSSTTTVTVPTTTVTGPTT 288
Query: 280 IDTVLCSSVLIPSSSRAQTDTDPTYI 305
+ TV + V IPS+ T P+ +
Sbjct: 289 VVTVPTTVVTIPSTVVTSPITTPSTV 314
>Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical
protein C28D4.3 protein.
Length = 368
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 473 YVWV-GRGSNLKEKAEAMNRAEQYLKYHDYPAW 504
YVW+ G G +L+ K +N QYL +YP W
Sbjct: 34 YVWIDGTGEHLRAKTRTINTKPQYLS--EYPIW 64
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 31.5 bits (68), Expect = 1.5
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 219 LIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYT 278
L+P +++ T T T + T+ T ++ + +++ + T+PT T
Sbjct: 253 LVPETTKPTTTTPTTTTTTTIPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTSTSTPTTTT 312
Query: 279 TIDTVLCSSVLIPSSSRAQTDT--DPTYIQPRVLYYTTVDIVLCSS 322
T+ T S+ P+++ T T T I T +DI C+S
Sbjct: 313 TMQTTTPSTTSTPTTTSTTTTTSASTTTISTTKPPTTQIDIEKCTS 358
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 31.1 bits (67), Expect = 2.0
Identities = 27/113 (23%), Positives = 42/113 (37%)
Query: 222 SSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTID 281
S + Q+ P+Y Y T + +S +S + + T P+Y Y +
Sbjct: 1600 SPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1659
Query: 282 TVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVLCSSVFVSKVKPTFES 334
+ SS SS + T PTY Y T +S S P++ES
Sbjct: 1660 SYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYES 1712
Score = 29.1 bits (62), Expect = 8.1
Identities = 27/108 (25%), Positives = 37/108 (34%), Gaps = 1/108 (0%)
Query: 197 PTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIP 256
P Y Y T + +S +S + + PTY Y T S P
Sbjct: 1721 PKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSP 1780
Query: 257 SSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTY 304
+S + T P+Y Y T T S P +S + T PTY
Sbjct: 1781 TSP-TYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPTY 1827
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 31.1 bits (67), Expect = 2.0
Identities = 27/113 (23%), Positives = 42/113 (37%)
Query: 222 SSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTID 281
S + Q+ P+Y Y T + +S +S + + T P+Y Y +
Sbjct: 1607 SPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1666
Query: 282 TVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTVDIVLCSSVFVSKVKPTFES 334
+ SS SS + T PTY Y T +S S P++ES
Sbjct: 1667 SYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYES 1719
Score = 29.1 bits (62), Expect = 8.1
Identities = 27/108 (25%), Positives = 37/108 (34%), Gaps = 1/108 (0%)
Query: 197 PTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIP 256
P Y Y T + +S +S + + PTY Y T S P
Sbjct: 1728 PKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSP 1787
Query: 257 SSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDTDPTY 304
+S + T P+Y Y T T S P +S + T PTY
Sbjct: 1788 TSP-TYSPTSPSYTPSSPQYSPTSPTYTPSPSEQPGTSAQYSPTSPTY 1834
>U64608-4|AAB04595.2| 282|Caenorhabditis elegans Hypothetical
protein T22B7.3 protein.
Length = 282
Score = 30.7 bits (66), Expect = 2.6
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 358 KGVERMKAITVANQIKDQDHNGRADIEVVDSEAHDGIFDRFF---DALGSGNKEAIA 411
+GV R KA+ +Q+K+ N A +EV++S + + D F A+ GNK +A
Sbjct: 39 RGVNREKALKQWDQLKNTIENSGAKVEVMESTGAESLPDIVFAANAAIIKGNKAYLA 95
>AF099920-3|AAK29845.1| 216|Caenorhabditis elegans Hypothetical
protein H06H21.3 protein.
Length = 216
Score = 30.3 bits (65), Expect = 3.5
Identities = 22/101 (21%), Positives = 41/101 (40%)
Query: 349 IFVFVGEKAKGVERMKAITVANQIKDQDHNGRADIEVVDSEAHDGIFDRFFDALGSGNKE 408
I + ++A+ ++ I ++ + D ++E +D +G S + +
Sbjct: 92 ILKYTPDEARRLKNEGLIPENAKLNENDEQDEGEVEFLDHVGDEGEAGEAKSDSDSSDSD 151
Query: 409 AIADAEEGGDDQEFERVVTKEVSLSEISDKTGSIRITRLPA 449
+ EE G D+E E E E SD + +IR L A
Sbjct: 152 SEKSDEEAGSDKEEESDDDSEEESDEDSDDSDNIREEDLAA 192
>AF003134-2|AAB54141.5| 691|Caenorhabditis elegans Hypothetical
protein ZC581.3 protein.
Length = 691
Score = 30.3 bits (65), Expect = 3.5
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 282 TVLCSSVLIPSSS-RAQTD--TDPTYIQPRVLYYTTVDIVLCSSVFVSKVKPTFESLNNG 338
T+ CSS L +S RA++D T P + + R L+ TT+ + + F + F+ LN
Sbjct: 114 TMRCSSFLNEASRLRAESDLSTTPRHDECRFLHLTTICLENHVNTFCPDGRKIFKRLNFR 173
Query: 339 D---CFILDVDHQIF 350
D F+L +D +F
Sbjct: 174 DYFLSFVLPMDDDLF 188
>U40419-8|AAA81428.3| 673|Caenorhabditis elegans Hypothetical
protein C27F2.1 protein.
Length = 673
Score = 29.9 bits (64), Expect = 4.6
Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 7/133 (5%)
Query: 329 KPTFE-SLNNGDCFILD-VDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRADIEVV 386
KPT ++N + +D++ + + E+ + + +A N+++ G IEV
Sbjct: 121 KPTIAPKISNAQITVQSTIDNKPYSYHNEEERQTQEQRAFGRLNKLR-----GLISIEVT 175
Query: 387 DSEAHDGIFDRFFDALGSGNKEAIADAEEGGDDQEFERVVTKEVSLSEISDKTGSIRITR 446
S+ + F+ S + G D E V T+ E + TR
Sbjct: 176 KSQVFTDLSSNIFEPFNSLPSNKSHALTQTGKDCHTEEVQTERGETEEKETQCPHSESTR 235
Query: 447 LPAPLKKEQLNTD 459
+ ++KE+ +TD
Sbjct: 236 IEDGIEKERTSTD 248
>Z81131-6|CAE17977.2| 734|Caenorhabditis elegans Hypothetical
protein T24D1.1b protein.
Length = 734
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 393 GIFDRFFDALGSGNKEAIADAEEGGDDQEFERVVTKEVSLSEISDKTGSIRITRLPAP 450
G F F L + K + D GG D + E ++V L E + K G +R+ R+P P
Sbjct: 634 GYFRHFGYGLAAMYKADLMDV--GGFDTKIEGWGKEDVDLFEKAIKNGRLRVIRVPEP 689
>Z81131-5|CAB03422.2| 608|Caenorhabditis elegans Hypothetical
protein T24D1.1a protein.
Length = 608
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 393 GIFDRFFDALGSGNKEAIADAEEGGDDQEFERVVTKEVSLSEISDKTGSIRITRLPAP 450
G F F L + K + D GG D + E ++V L E + K G +R+ R+P P
Sbjct: 508 GYFRHFGYGLAAMYKADLMDV--GGFDTKIEGWGKEDVDLFEKAIKNGRLRVIRVPEP 563
>AY241925-2|AAO85273.1| 734|Caenorhabditis elegans chondroitin
disaccharide polymerase protein.
Length = 734
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 393 GIFDRFFDALGSGNKEAIADAEEGGDDQEFERVVTKEVSLSEISDKTGSIRITRLPAP 450
G F F L + K + D GG D + E ++V L E + K G +R+ R+P P
Sbjct: 634 GYFRHFGYGLAAMYKADLMDV--GGFDTKIEGWGKEDVDLFEKAIKNGRLRVIRVPEP 689
>AY241925-1|AAO85274.1| 736|Caenorhabditis elegans chondroitin
disaccharide polymerase protein.
Length = 736
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 393 GIFDRFFDALGSGNKEAIADAEEGGDDQEFERVVTKEVSLSEISDKTGSIRITRLPAP 450
G F F L + K + D GG D + E ++V L E + K G +R+ R+P P
Sbjct: 636 GYFRHFGYGLAAMYKADLMDV--GGFDTKIEGWGKEDVDLFEKAIKNGRLRVIRVPEP 691
>AB088398-1|BAC76781.1| 715|Caenorhabditis elegans chondroitin
synthase-S protein.
Length = 715
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 393 GIFDRFFDALGSGNKEAIADAEEGGDDQEFERVVTKEVSLSEISDKTGSIRITRLPAP 450
G F F L + K + D GG D + E ++V L E + K G +R+ R+P P
Sbjct: 615 GYFRHFGYGLAAMYKADLMDV--GGFDTKIEGWGKEDVDLFEKAIKNGRLRVIRVPEP 670
>AB088397-1|BAC76780.1| 726|Caenorhabditis elegans chondroitin
synthase protein.
Length = 726
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 393 GIFDRFFDALGSGNKEAIADAEEGGDDQEFERVVTKEVSLSEISDKTGSIRITRLPAP 450
G F F L + K + D GG D + E ++V L E + K G +R+ R+P P
Sbjct: 626 GYFRHFGYGLAAMYKADLMDV--GGFDTKIEGWGKEDVDLFEKAIKNGRLRVIRVPEP 681
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical protein
F26C11.3 protein.
Length = 1317
Score = 29.1 bits (62), Expect = 8.1
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 204 VLYYTTIDTVLCSSVLIPSSSRAQTDTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQT 263
++ Y TVL + PS+++ +T+T T Q TT T + ++ P+ +T
Sbjct: 963 LIAYKNCTTVLMQLIYNPSTNKTRTET-TTDAQGCKATITT-PTPITTTYNWPTGGTTRT 1020
Query: 264 -DTDPTYIQPRVLYYTTIDTVLCSSVLIPSSSRAQTDT 300
+ + ++ Y TVL + PS+++ +T+T
Sbjct: 1021 LPSGEIILSESLIAYKNCTTVLMQLIYNPSTNKTRTET 1058
>L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical protein
F54F2.1 protein.
Length = 1226
Score = 29.1 bits (62), Expect = 8.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 406 NKEAIADAEEGGDDQEFERVVTKEVSLSEISDKTGSIRITRLPAPLKKEQ 455
+K+ D E DDQE++ +E E D+ GS R+ R P P KK++
Sbjct: 976 DKKKKGDYEYIPDDQEYDGDDFEEED-DEDFDRAGSKRVKRNPTPKKKKK 1024
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.135 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,702,101
Number of Sequences: 27539
Number of extensions: 617128
Number of successful extensions: 1529
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1438
Number of HSP's gapped (non-prelim): 77
length of query: 527
length of database: 12,573,161
effective HSP length: 85
effective length of query: 442
effective length of database: 10,232,346
effective search space: 4522696932
effective search space used: 4522696932
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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