Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001753-TA|BGIBMGA001753-PA|IPR001128|Cytochrome P450
(536 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomy... 42 3e-04
SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces ... 40 0.001
SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|... 33 0.076
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 29 2.1
SPBC776.17 |||rRNA processing protein Rrp7 |Schizosaccharomyces ... 28 2.8
SPAC869.03c |||urea transporter |Schizosaccharomyces pombe|chr 1... 28 2.8
SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1 |Sc... 28 2.8
SPBC800.03 |clr3||histone deacetylase |Schizosaccharomyces pombe... 27 5.0
SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein Urb1|Schi... 27 8.7
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 8.7
>SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 541
Score = 41.5 bits (93), Expect = 3e-04
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 330 VARDPEVGRKIRQEIDAVTRGKR--PVGLTDRSHLPYTEATILECLRYASSPI-VPHVAT 386
+A P+V +K+R+E + +G P+ L + YT A + ECLR + VP+
Sbjct: 335 LADHPDVLQKVREEQLRIRKGDIDVPLSLDLMEKMTYTRAVVKECLRLRPPVLMVPYRVK 394
Query: 387 ENANIS-GYGIEKGTVVFINNYVLNNSEQYWSEPEKFDPSRF 427
+ I+ Y + K +V Y + + + EPE F+P R+
Sbjct: 395 KAFPITPDYTVPKDAMVIPTLYGALHDSKVYPEPETFNPDRW 436
>SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 495
Score = 39.5 bits (88), Expect = 0.001
Identities = 63/293 (21%), Positives = 119/293 (40%), Gaps = 41/293 (13%)
Query: 224 FDEIFWEINQGYA-VDFL-PWLAPFYKKHMEKLSNWSQDIRSFILSRIVEQREINLDTEA 281
F +++ +++QG++ V+F+ PWL + ++ Q ++++ +I++ R + TE
Sbjct: 200 FADLYHDLDQGFSPVNFVFPWLPLPRNRRRDRAHKIMQ--KTYL--KIIKDRRSS--TEN 253
Query: 282 PEKDFLDGLLRVLHED--PTMDRNTIIFMLEDFLGG-HSSVGNLVMLCLTAVARDPEVGR 338
P D + L+ + D P + M+ + G H+S +V + L + PE+
Sbjct: 254 PGTDMIWTLMSCKYRDGRPLKEHEIAGMMIALLMAGQHTSAATIVWV-LALLGSKPEIIE 312
Query: 339 KIRQEIDAVTRGKRPVGLTDRSHLPYTEATILECLRYASSPIVPHVATENANISGYGIEK 398
+ +E V + +P I E LR PI H+ ++ G +
Sbjct: 313 MLWEEQKRVVGENLELKFDQYKDMPLLNYVIQETLRL-HPPIHSHMRKVKRDLPVPGSK- 370
Query: 399 GTVVFINNYVLN------NSEQYWSEPEKFDPSRFLEKTRVRTRRNS-QCDSGLESDSER 451
V+ NNY+L E+Y++ FDP R+ + RV N+ Q D G
Sbjct: 371 -IVIPANNYLLAAPGLTATEEEYFTHATDFDPKRWND--RVNEDENAEQIDYGYG----- 422
Query: 452 APVGKPDVEREMLSVKKNIPHFIPFSIGKRTCIGQTMVTSMSFTMFANIMQSF 504
L K ++PF G+ CIG+ T+ + + +
Sbjct: 423 ------------LVTKGAASPYLPFGAGRHRCIGEQFAYMHLSTIISKFVHDY 463
>SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 330
Score = 33.5 bits (73), Expect = 0.076
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 312 FLGGHSSVGNLVMLCLTAVARDPEVGRKIRQEIDAVTRGKRPVGLTDRSHLPYTEATILE 371
F+GG + +GN+ V DPE R + + + GK + D +H +A I++
Sbjct: 163 FMGGSTGIGNITSQAEFNVYADPEAARLVLETKSLI--GKLFMVPLDVTHKVLLDANIIQ 220
Query: 372 CLRYASSP 379
LR S+P
Sbjct: 221 LLRQHSNP 228
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 28.7 bits (61), Expect = 2.1
Identities = 28/141 (19%), Positives = 53/141 (37%), Gaps = 6/141 (4%)
Query: 383 HVATENANISGYGIEKGTVVFINNYVLNNSEQYWSEPEKFDPSRFLEKTRVRTRRNSQCD 442
HV+ + +N S Y +F+ N S Y F ++FL T + ++ D
Sbjct: 208 HVSLDASNFSSYAENSSKFLFLQELFKNLSPSYSKTFFLFISNQFLANTLTQWLKSQNID 267
Query: 443 SGLESDSERAPVGKPDVEREMLSVKKNIP---HFIPFSIGKRTCIGQTMVTSMSFTMFAN 499
+ L ++ + P + + V K P HF+ I + MS T
Sbjct: 268 AELWAEEDAKTSQHPAI---WICVSKKAPSASHFLQSCPDLSATIFYDIEAYMSVTSSLP 324
Query: 500 IMQSFEVGVENINDLKQKPAC 520
+QS + + ++ ++ C
Sbjct: 325 SIQSLVLRLIHLGSIEHAIKC 345
>SPBC776.17 |||rRNA processing protein Rrp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 254
Score = 28.3 bits (60), Expect = 2.8
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Query: 393 GYGIEKGTVVFINNYVLNNSEQYWSEPEKFDPSRFLEKTRVRTRRNSQCDSGLES--DSE 450
GY +E F+N VL +E S ++ EK R+ +N + G + S
Sbjct: 133 GY-VESYDRQFVNPRVL--AESVDSYMKRVTKKEIAEKRRLFAMKNQPDEDGFVTVVRSG 189
Query: 451 RAPVGKP-DVEREM 463
RAPVG+P D ER++
Sbjct: 190 RAPVGRPQDAERQL 203
>SPAC869.03c |||urea transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 23 TVRWVKTNKYGGVETAILRTAPGPVCWPIIGSLH 56
T+ W K NKYG + + + G VCW +GS +
Sbjct: 444 TLFWKKMNKYGMIIGCPMGSITGVVCW--VGSCY 475
>SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/50 (28%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 166 TFESVELIQTLKGLTSRSDASIDLKPILMKSAMNMFSNYMCSVRFDDEDL 215
TF+ V+ ++ L+GL ++ + P + +N F+NY+C V ++++L
Sbjct: 840 TFQHVQSLEDLRGLLTKWYSKASKGPNIHD--VNYFANYVCRVIREEKNL 887
>SPBC800.03 |clr3||histone deacetylase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 687
Score = 27.5 bits (58), Expect = 5.0
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 149 CGPKQHTDSHARIGTVGTFESVELIQTLKGLTSRSDASIDLKPILMKSAMNMFSN-YMCS 207
C +H D++ + V V I+T + D I PIL S N+F+N +CS
Sbjct: 417 CMRPKHFDANPKDAHVDRLHDV--IRTYQAKKLFEDWKITNMPILRDSVSNVFNNQVLCS 474
Query: 208 VRFDDED 214
F +D
Sbjct: 475 SNFFQKD 481
>SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein
Urb1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1568
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 149 CGPKQHTDSHARIGTVGTFESVELIQTLKGLTSRSDASIDLKPILMKSAMNMFSNYMCS 207
C K +S + + SV LI+ + + D S D K ++ ++FSN +C+
Sbjct: 589 CFKKHSVNSQKKTAPEVSPISVTLIEQIPFFLQKRDISDDSKDAVLSWLSDLFSNLVCT 647
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 409 LNNS--EQYWSEPEKFDPSRFLEKTRVRTRRNSQCDSGLESDSERAPVGKPDVERE 462
L+NS E+ W EP + D +K+ ++ N++ D + D +A K E+E
Sbjct: 3995 LSNSLNEKLWDEPNEEDLLETEQKSNEQSAANNESDLVSKEDDNKALEDKDRQEKE 4050
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.321 0.137 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,450,871
Number of Sequences: 5004
Number of extensions: 104712
Number of successful extensions: 289
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 283
Number of HSP's gapped (non-prelim): 13
length of query: 536
length of database: 2,362,478
effective HSP length: 76
effective length of query: 460
effective length of database: 1,982,174
effective search space: 911800040
effective search space used: 911800040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 56 (26.6 bits)
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