Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001751-TA|BGIBMGA001751-PA|IPR002048|Calcium-binding
EF-hand
         (217 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   3.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   3.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   3.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   3.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   3.3  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   4.3  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   7.5  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   7.5  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   9.9  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 179 EDELVNLIDPILNMDDHNRDGYI 201
           +D+  NLI P +N D    +GY+
Sbjct: 355 QDDAGNLISPSINDDGTCGNGYV 377


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 14/59 (23%), Positives = 23/59 (38%)

Query: 140 NNNKLDGCELIKSLIHWHEQGHKQENPPSEAPVGEKIFNEDELVNLIDPILNMDDHNRD 198
           + NK +  E +KS++   E    +        V +  + E E     D    + DHN D
Sbjct: 571 HENKEEMMEFLKSILRLDEDQSARRVAQKYLRVVDPDYYEFETHIFFDDAFEISDHNDD 629


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 14/59 (23%), Positives = 23/59 (38%)

Query: 140 NNNKLDGCELIKSLIHWHEQGHKQENPPSEAPVGEKIFNEDELVNLIDPILNMDDHNRD 198
           + NK +  E +KS++   E    +        V +  + E E     D    + DHN D
Sbjct: 571 HENKEEMMEFLKSILRLDEDQSARRVAQKYLRVVDPDYYEFETHIFFDDAFEISDHNDD 629


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 14/59 (23%), Positives = 23/59 (38%)

Query: 140 NNNKLDGCELIKSLIHWHEQGHKQENPPSEAPVGEKIFNEDELVNLIDPILNMDDHNRD 198
           + NK +  E +KS++   E    +        V +  + E E     D    + DHN D
Sbjct: 571 HENKEEMMEFLKSILRLDEDQSARRVAQKYLRVVDPDYYEFETHIFFDDAFEISDHNDD 629


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 14/59 (23%), Positives = 23/59 (38%)

Query: 140 NNNKLDGCELIKSLIHWHEQGHKQENPPSEAPVGEKIFNEDELVNLIDPILNMDDHNRD 198
           + NK +  E +KS++   E    +        V +  + E E     D    + DHN D
Sbjct: 571 HENKEEMMEFLKSILRLDEDQSARRVAQKYLRVVDPDYYEFETHIFFDDAFEISDHNDD 629


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 11/38 (28%), Positives = 16/38 (42%)

Query: 129 QFHYFKMHDADNNNKLDGCELIKSLIHWHEQGHKQENP 166
           Q H    H  DN+N  +    I+     H+  H  +NP
Sbjct: 246 QTHKSPSHSVDNSNSSEKKSSIQHGDDAHKTHHLDKNP 283


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 179 EDELVNLIDPILNMDDHNRDGY 200
           +D+  NLI P +N D    +GY
Sbjct: 356 QDDAGNLISPSINDDGTCGNGY 377


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)

Query: 134 KMHDADNNNKLDGCEL 149
           ++H+ DN  K  GC+L
Sbjct: 31  QVHEVDNQLKQMGCDL 46


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 179 EDELVNLIDPILNMDDHNRDGYI 201
           +D   NLI P +N D    +GY+
Sbjct: 356 QDGAGNLISPSINDDGTCGNGYV 378


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.136    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,094
Number of Sequences: 317
Number of extensions: 1591
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 217
length of database: 114,650
effective HSP length: 54
effective length of query: 163
effective length of database: 97,532
effective search space: 15897716
effective search space used: 15897716
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 41 (20.6 bits)