Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001751-TA|BGIBMGA001751-PA|IPR002048|Calcium-binding
EF-hand
(217 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0202 + 1605703-1606402,1606681-1606824,1606911-1607063,160... 32 0.41
12_01_0217 + 1647319-1648327,1648462-1648577,1648650-1648817,164... 31 0.55
11_06_0212 - 21319441-21319498,21319737-21319867,21319944-213200... 31 0.95
11_01_0449 - 3473662-3475049,3476026-3476128,3476215-3476439,347... 29 2.2
04_04_0934 + 29504806-29505532,29506059-29506202,29506291-295064... 29 2.2
07_03_1756 - 29239137-29239325,29239741-29240259,29240693-292408... 29 3.8
03_06_0239 - 32578231-32578353,32578431-32578655,32579081-325792... 29 3.8
02_05_1339 + 35793795-35794922,35795009-35795233,35795314-35795460 29 3.8
12_02_0370 + 18139557-18140469,18140561-18140704,18140804-181409... 28 5.1
04_04_0349 + 24588184-24588315,24588481-24588543,24588674-245887... 28 5.1
04_01_0490 - 6440176-6440448,6440785-6441074,6441156-6441304,644... 28 5.1
11_06_0022 + 19321886-19321918,19323059-19323131,19323587-193236... 28 6.7
09_04_0557 + 18503380-18503793 28 6.7
04_04_0786 - 28052981-28053040,28053123-28053222,28053447-280535... 28 6.7
04_04_0419 + 25086456-25086768,25087302-25087369,25087458-250876... 28 6.7
12_01_0450 - 3552701-3552865,3552971-3553195,3553306-3553473,355... 27 8.9
11_04_0105 - 13505786-13505800,13505940-13506043,13506421-135066... 27 8.9
11_01_0203 - 1610086-1610192,1610620-1610669,1610888-1611348 27 8.9
10_08_0781 + 20509033-20509714,20510048-20510191,20510604-205107... 27 8.9
09_04_0397 + 17273013-17273570 27 8.9
07_01_0437 - 3322132-3322251,3322345-3322569,3322953-3323120,332... 27 8.9
03_06_0235 + 32539025-32539886,32540330-32540473,32540595-325407... 27 8.9
02_04_0593 + 24177897-24178182,24178442-24178509,24178617-241788... 27 8.9
>03_01_0202 +
1605703-1606402,1606681-1606824,1606911-1607063,
1607236-1607351,1607737-1607904,1607990-1608214,
1608711-1608833
Length = 542
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 184 NLIDPILNMDDHNRDGYIDYPEFVRAQQKS 213
+L++ I++ D N DG IDY EFV Q S
Sbjct: 489 SLLEEIISEVDQNNDGQIDYAEFVAMMQGS 518
>12_01_0217 +
1647319-1648327,1648462-1648577,1648650-1648817,
1648911-1649038,1649121-1649220,1649329-1649433
Length = 541
Score = 31.5 bits (68), Expect = 0.55
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 121 SKMSDQELQFHYFKMHDADNNNKLDGCELIKSLIHWHEQGHKQE--------NPPSEAPV 172
+K SD E++ + DAD N +D E + + +H ++ ++ + + +
Sbjct: 418 TKFSDNEIE-QLMEAADADGNGIIDYEEFVTATVHMNKMDREEHLYTAFQYFDKDNSGYI 476
Query: 173 G----EKIFNEDEL--VNLIDPILNMDDHNRDGYIDYPEFVRAQQK 212
E+ E L N I ++ D N DG IDY EFV +K
Sbjct: 477 TKEELEQALKEQGLYDANEIKDVITDADSNNDGRIDYSEFVAMMRK 522
>11_06_0212 -
21319441-21319498,21319737-21319867,21319944-21320033,
21320141-21320298,21320646-21320721
Length = 170
Score = 30.7 bits (66), Expect = 0.95
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 170 APVGEKIFNEDELVNLIDPILNMDDHNRDGYIDYPEFVRAQQKS 213
A +GE++ EDE ID ++ D N DG +DY EF R +
Sbjct: 114 ASLGEEM-TEDE----IDDMMKAADSNNDGQVDYEEFKRVMMST 152
>11_01_0449 -
3473662-3475049,3476026-3476128,3476215-3476439,
3476689-3476856,3477414-3477529,3477640-3477792,
3477879-3478022,3478980-3479583
Length = 966
Score = 29.5 bits (63), Expect = 2.2
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 18/107 (16%)
Query: 121 SKMSDQELQFHYFKMHDADNNNKLDGCELIKSLIHWHEQGHKQENPPSEAPVGEK----I 176
S++++ E+Q + D DN+ +D E I + +H ++ ++EN S +K
Sbjct: 382 SELTEHEIQA-LMEAADIDNSGTIDYGEFIAATLHMNKL-EREENLVSAFSFFDKDGSGF 439
Query: 177 FNEDEL-----------VNLIDPILNMDDHNRDGYIDYPEFVRAQQK 212
DEL ++L D I ++D +N DG IDY EF +K
Sbjct: 440 ITIDELSQACREFGLDDLHLEDMIKDVDQNN-DGQIDYSEFTAMMRK 485
>04_04_0934 +
29504806-29505532,29506059-29506202,29506291-29506443,
29506589-29506704,29507180-29507347,29507716-29507778,
29507827-29508051,29508472-29508594
Length = 572
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 186 IDPILNMDDHNRDGYIDYPEFVRAQQK 212
+D ++N D + DG IDY EFV K
Sbjct: 521 LDDVINEADQDNDGRIDYGEFVAMMTK 547
>07_03_1756 -
29239137-29239325,29239741-29240259,29240693-29240800,
29240856-29241155,29241730-29241831,29243042-29243209,
29243878-29243991,29244184-29244288,29244372-29244502,
29244794-29244918,29245001-29245172,29245277-29245316,
29245636-29245722,29245803-29245868,29246412-29246510,
29246714-29246836,29247066-29247107,29247195-29247260,
29247362-29247553,29247672-29247737,29248839-29249141
Length = 1038
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 88 GHTHHGDPQ--LLNPANIAQERDHIQEHMDVPIDTSKM 123
G H GDP LL + Q + + ++DVPID SK+
Sbjct: 541 GRGHSGDPASALLELLDPEQNVNFLDHYLDVPIDLSKV 578
>03_06_0239 -
32578231-32578353,32578431-32578655,32579081-32579248,
32579331-32579446,32579540-32579692,32579779-32579922,
32580775-32581576
Length = 576
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 186 IDPILNMDDHNRDGYIDYPEFVRAQQK 212
I+ I+ D + DG IDY EFV QK
Sbjct: 525 IEDIIGDIDQDNDGRIDYNEFVEMMQK 551
>02_05_1339 + 35793795-35794922,35795009-35795233,35795314-35795460
Length = 499
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 186 IDPILNMDDHNRDGYIDYPEFVRAQQK 212
ID I+ D + DG IDY EFV +K
Sbjct: 440 IDDIIREVDQDNDGRIDYGEFVAMMKK 466
>12_02_0370 +
18139557-18140469,18140561-18140704,18140804-18140956,
18141032-18141147,18141231-18141398,18142110-18142334,
18142458-18142577
Length = 612
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 181 ELVNLIDPILNMDDHNRDGYIDYPEFVRAQQKS 213
E V L D I +D N DG IDY EFV QK+
Sbjct: 558 EDVRLEDMIGEVDQDN-DGRIDYNEFVAMMQKT 589
>04_04_0349 +
24588184-24588315,24588481-24588543,24588674-24588740,
24588819-24588919,24589082-24589126,24589236-24589697,
24589905-24590075
Length = 346
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 135 MHDADNNNKLDGCELIKSLIHWHEQGHKQENPPSEAPV 172
+H D N + C I +++ EQ ++N PSE+PV
Sbjct: 141 VHFQDTNAETIRCRAIPNVLANLEQARDRQNRPSESPV 178
>04_01_0490 -
6440176-6440448,6440785-6441074,6441156-6441304,
6441432-6441890,6441973-6442269,6442604-6443502,
6443793-6443827,6443984-6444078,6444184-6444247,
6446099-6446175,6446330-6446514
Length = 940
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 87 AGHTHHGDPQLLNPANIAQERDHIQEHMDVPIDTS 121
AG T H P + N A+ERD I+ H+ P D S
Sbjct: 655 AGSTPHCLPHVRNA--FAEERDRIEHHLSKPKDLS 687
>11_06_0022 +
19321886-19321918,19323059-19323131,19323587-19323680,
19324383-19324499,19324584-19324641,19324713-19325114
Length = 258
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 138 ADNNNKLDGCELIKSLIHWHEQGHKQENPPSEAPVGEKI 176
AD L G E + IH E +PP+EAP +I
Sbjct: 168 ADQGEALPGEETVPETIHGTESVPPSTHPPAEAPSAAEI 206
>09_04_0557 + 18503380-18503793
Length = 137
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 172 VGEKIFNEDELVNLIDPILNMDDHNRDGYIDYPEFVRAQQK 212
V E + DELV + + DH+ +G +D EF RA+ K
Sbjct: 61 VDEAAMSSDELVEMYRGLYARFDHDGNGTVDLEEF-RAEMK 100
>04_04_0786 -
28052981-28053040,28053123-28053222,28053447-28053574,
28053654-28053821,28053901-28054013,28054135-28054287,
28054385-28054528,28054794-28055529
Length = 533
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 186 IDPILNMDDHNRDGYIDYPEFVRAQQK 212
I +L+ D ++DG IDY EFV +K
Sbjct: 503 IKQVLDEVDKDKDGRIDYEEFVEMMRK 529
>04_04_0419 +
25086456-25086768,25087302-25087369,25087458-25087681,
25087929-25088012,25088593-25088806,25089252-25089428,
25089526-25089645,25089865-25089991,25090104-25090130,
25090526-25091007
Length = 611
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 185 LIDPILNMDDHNRDGYIDYPEFVRAQQKSQ 214
++D I ++ D N DG + EFVRA Q+ +
Sbjct: 410 VVDIIFHVFDTNHDGNLSSEEFVRALQRRE 439
>12_01_0450 -
3552701-3552865,3552971-3553195,3553306-3553473,
3554514-3554629,3554735-3554887,3554978-3555121,
3556667-3557276
Length = 526
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 183 VNLIDPILNMDDHNRDGYIDYPEFVRAQQK 212
V+L D I ++D +N DG IDY EF +K
Sbjct: 459 VHLEDMIKDVDQNN-DGQIDYSEFAAMMRK 487
>11_04_0105 -
13505786-13505800,13505940-13506043,13506421-13506649,
13506661-13506954,13507139-13507338,13507531-13507585
Length = 298
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 142 NKLDGCELIKSLIHWHEQGHKQENPPSEAP 171
NKL G L+ S ++GHK N P++ P
Sbjct: 205 NKLHGVRLLHSNSRSKQEGHKDCNVPTDLP 234
>11_01_0203 - 1610086-1610192,1610620-1610669,1610888-1611348
Length = 205
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 170 APVGEKIFNEDELVNLIDPILNMDDHNRDGYIDYPEFVRAQQKSQKQN 217
A +G+ + ++DEL ++ L+ D + DG I+Y EF++ ++QN
Sbjct: 116 ANLGDPL-SDDELADM----LHEADSDGDGQINYNEFLKVMMAKRRQN 158
>10_08_0781 +
20509033-20509714,20510048-20510191,20510604-20510719,
20511356-20511520,20511822-20512043,20512613-20512735
Length = 483
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 194 DHNRDGYIDYPEFVRAQQKS 213
D N DG IDY EFV Q +
Sbjct: 440 DQNNDGQIDYAEFVTMMQSN 459
>09_04_0397 + 17273013-17273570
Length = 185
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 194 DHNRDGYIDYPEFVRAQQKSQKQ 216
D NRDG++D +F+ +S+K+
Sbjct: 162 DRNRDGFVDMDDFMAMMTRSRKK 184
>07_01_0437 -
3322132-3322251,3322345-3322569,3322953-3323120,
3323207-3323322,3323394-3323546,3323655-3323798,
3324475-3325255
Length = 568
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 186 IDPILNMDDHNRDGYIDYPEFVRAQQK 212
++ I+ D + DG IDY EFV QK
Sbjct: 518 LEDIIKDIDQDNDGRIDYNEFVTMMQK 544
>03_06_0235 +
32539025-32539886,32540330-32540473,32540595-32540747,
32540871-32540986,32541254-32541421,32541534-32541758,
32541884-32542015
Length = 599
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 183 VNLIDPILNMDDHNRDGYIDYPEFVRAQQK 212
V L + I +D+ N DG IDY EFV QK
Sbjct: 543 VQLEEMIREVDEDN-DGRIDYNEFVAMMQK 571
>02_04_0593 +
24177897-24178182,24178442-24178509,24178617-24178840,
24179221-24179304,24180183-24180396,24181242-24181418,
24181507-24181626,24181854-24181998,24182055-24182065,
24182222-24182314
Length = 473
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 185 LIDPILNMDDHNRDGYIDYPEFVRAQQKSQ 214
++D I + D NRDG + EF+RA Q+ +
Sbjct: 401 VVDVIFLVFDANRDGSLSADEFLRALQRRE 430
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.136 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,998,518
Number of Sequences: 37544
Number of extensions: 189914
Number of successful extensions: 528
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 499
Number of HSP's gapped (non-prelim): 37
length of query: 217
length of database: 14,793,348
effective HSP length: 79
effective length of query: 138
effective length of database: 11,827,372
effective search space: 1632177336
effective search space used: 1632177336
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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