GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001750-TA|BGIBMGA001750-PA|IPR013026|Tetratricopeptide
region, IPR001179|Peptidylprolyl isomerase, FKBP-type,
IPR001440|Tetratricopeptide TPR_1, IPR013105|Tetratricopeptide TPR_2
         (437 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       24   1.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   5.6  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   5.6  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 265 AVCYYKTN--KPKHVLNMCECLDRLIDTEKHCK 295
           A+C   T+   P    N   C+DR+ D E +CK
Sbjct: 101 ALCNINTDDCSPNPCRNNGSCVDRIADFECNCK 133


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query: 251 LDIKNNKVNAYLNLAVCYY 269
           L++ NN    Y N+  C Y
Sbjct: 99  LEVSNNNFKTYSNVTTCSY 117


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 11/50 (22%), Positives = 21/50 (42%)

Query: 259 NAYLNLAVCYYKTNKPKHVLNMCECLDRLIDTEKHCKALYYYGKAHEMLG 308
           N Y+ +   +YK      +L   E   ++  T+++C   Y +   H   G
Sbjct: 79  NYYVIVVTTFYKRRTWTRLLKNLESCAKIKKTKRYCYYYYAFFGVHLAYG 128


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.136    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,802
Number of Sequences: 317
Number of extensions: 3850
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 3
length of query: 437
length of database: 114,650
effective HSP length: 59
effective length of query: 378
effective length of database: 95,947
effective search space: 36267966
effective search space used: 36267966
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)