Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001750-TA|BGIBMGA001750-PA|IPR013026|Tetratricopeptide
region, IPR001179|Peptidylprolyl isomerase, FKBP-type,
IPR001440|Tetratricopeptide TPR_1, IPR013105|Tetratricopeptide TPR_2
(437 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC839.17c |fkh1||FKBP-type peptidyl-prolyl cis-trans isomerase... 43 7e-05
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 36 0.011
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ... 34 0.045
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 31 0.42
SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4 |Schiz... 29 1.3
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 29 1.7
SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces ... 29 1.7
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 28 2.2
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 27 5.2
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 27 5.2
SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces p... 27 6.8
SPBC31F10.14c |hip3|hir3|HIRA interacting protein Hip3|Schizosac... 27 6.8
SPAC1486.06 |||nicotinate phosphoribosyltransferase |Schizosacch... 27 6.8
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 27 6.8
>SPBC839.17c |fkh1||FKBP-type peptidyl-prolyl cis-trans isomerase
Fkh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 112
Score = 43.2 bits (97), Expect = 7e-05
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 76 VKMLIIEEGKGPLVPVDSE-VTIHYAAYWEKAVIPFDSTLTMNMGAPKRLRLGTGKIIPG 134
V+ +I G G P + +T+HY FDS++ + G+P +G G++I G
Sbjct: 3 VEKQVISSGNGQDFPKPGDRITMHYTGTLTNGK-KFDSSV--DRGSPFVCTIGVGQLIRG 59
Query: 135 LEIGLT-MVKGPQARLNLLVQPAAAWGPRGVPPRIRPEPA-LFVIVLYDVKDNYA 187
+ G+ M G +A+L + P +GPRG P I P LF + L + D A
Sbjct: 60 WDEGVPKMSLGEKAKLT--ITPDYGYGPRGFPGLIPPNSTLLFDVELLAINDKKA 112
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 35.9 bits (79), Expect = 0.011
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 257 KVNAYLNLAVCYYKTNKPKHVL-NMCECLDRLIDTE-KHCKALYYYGKAHEMLGKTEMAI 314
+ + Y NLA+ K NKP+ + N ++ TE + KA Y G A +L E +
Sbjct: 258 RYSIYANLALVALKQNKPQEAIRNANIVIEASNSTELEKQKAYYRLGCAQGLLKNFEES- 316
Query: 315 KYYKKALKLEPKNKEIGKILADLDTKTKDFAVNEKAMWLKAF 356
+KAL + I K LA++ K KD+ ++ + K F
Sbjct: 317 ---EKALAKAGNDPAISKKLAEIRQKKKDYKKRQQKAYAKMF 355
>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 33.9 bits (74), Expect = 0.045
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 295 KALYYYGKAHEMLGKTEMAIKYYKKALKLEPKNK 328
+ALY GKA+ +G A+KYY+ L L P ++
Sbjct: 925 EALYNLGKAYHFIGLEHYAVKYYEAVLGLSPMSQ 958
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 30.7 bits (66), Expect = 0.42
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 262 LNLAVCYYKTNKPKHVLNMCECLDRLIDTEKHCKALYYYGKAHEMLGKTEM--AIKYYKK 319
LN A Y K + LN + L R ID+ + Y KA + + +M A K
Sbjct: 109 LNEAEVYLKNKQAGLALNALDRLQRRIDSTTQPPMSWMYLKAQVYIFQNDMDRAQKIAHD 168
Query: 320 ALKLEPKNKE 329
L+L PKN E
Sbjct: 169 VLRLNPKNVE 178
Score = 27.9 bits (59), Expect = 3.0
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 292 KHCKALYYYGKAHEMLGKTEMAIKYYKKALKLEP 325
K+ +AL GK G+ AI ++++ALKL+P
Sbjct: 175 KNVEALVLRGKVMYYSGENAKAITHFQEALKLDP 208
>SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 674
Score = 29.1 bits (62), Expect = 1.3
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Query: 248 DEELDIKNNKVNAYLNLAVCYYKTNKPKHVLNMCECLDRLIDTEKHCKALYY-YGKAHEM 306
+ LD+ + + +L C K H N+ DR + L+Y Y EM
Sbjct: 94 ERALDVDSTYIPLWLKYIECEMKNRNINHARNL---FDRAVTQLPRVDKLWYKYVYMEEM 150
Query: 307 LGKTEMAIKYYKKALKLEP 325
LG + +++ LK EP
Sbjct: 151 LGNITGCRQVFERWLKWEP 169
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 28.7 bits (61), Expect = 1.7
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 74 GDVKMLIIEEGKGPLVPVDSEVTIHYAAYWEKAVIPFDSTLTMNMGAPKRLRLGTGKIIP 133
G V + ++ G G +V + Y E + FD G P LG G++I
Sbjct: 257 GGVVVTDVKTGSGASATNGKKVEMRYIGKLENGKV-FDKN---TKGKPFAFILGRGEVIR 312
Query: 134 GLEIGLT-MVKGPQARLNLLVQPAAAWGPRGVPPRIRPEPALFVIVLYDV 182
G ++G+ M +G + ++ + A+G + +P + +F + L V
Sbjct: 313 GWDVGVAGMQEGGERKIT--IPAPMAYGNQSIPGIPKNSTLVFEVKLVRV 360
>SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1213
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 239 LRLSRPGTADEELDIKNNK-VNAYLNLAVCYYKTNKPKHVLNMCECLDRLIDTEK 292
+ + GT L + ++K + LN+ +C Y +KP + + C+ RL D K
Sbjct: 650 MNIQNIGTVRFRLYLDSSKALTDRLNVLLCNYIADKPNSSIQLLSCIKRLNDDVK 704
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 28.3 bits (60), Expect = 2.2
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 261 YLNLAVCYYKTNKPKHVLNMCECLDRLIDTEKHCKALYYYGKAHEMLGKTEMAIKYYKKA 320
Y N A Y + + ++ + + L L H +A G+A LG A YKK
Sbjct: 120 YSNRAAAYNQLGQFENAVE--DALTCLSLDPHHARAFGRLGRAKLSLGDAAAAADAYKKG 177
Query: 321 LKLEPKNK 328
L +P N+
Sbjct: 178 LDFDPNNE 185
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 27.1 bits (57), Expect = 5.2
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 263 NLAVCYYKTNKPKHVLNMCECL-----DRLIDTEKHCKALYYYGKAHEMLGKTEMAIKYY 317
NLA Y++ ++ + CE + D + KAL G ++ G AI YY
Sbjct: 303 NLAAAYFEADQLDDCIKTCEDAIEQGRELRADFKLIAKALGRLGTTYQKRGDLVKAIDYY 362
Query: 318 KKALKLEPKNKEIGKILADLDTKTKDFAVNE 348
+++L E + +I L D + K+K+ E
Sbjct: 363 QRSL-TEHRTPDILSRLKDAE-KSKELQDRE 391
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 27.1 bits (57), Expect = 5.2
Identities = 12/47 (25%), Positives = 25/47 (53%)
Query: 289 DTEKHCKALYYYGKAHEMLGKTEMAIKYYKKALKLEPKNKEIGKILA 335
+ +H +A + G+ H +LG ++ +A+KL+ N ++ LA
Sbjct: 323 ENPQHFEAWKWLGRIHTLLGNESRVVEALLEAVKLDSTNLDLMMDLA 369
>SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1028
Score = 26.6 bits (56), Expect = 6.8
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 326 KNKEIGKILADLDTKTKDFAVNEKAMWLKAFNVEVPATNAVYDVDATFQSDVLDMCQSLA 385
KN+ + ++ L + K+ ++ + + L+ T YD+ TF DVL + S +
Sbjct: 792 KNEVLKRMAYYLIDENKEISILRRILSLRIVEPTTSFTRYEYDLWRTFYPDVLYLNYSKS 851
Query: 386 GR 387
GR
Sbjct: 852 GR 853
>SPBC31F10.14c |hip3|hir3|HIRA interacting protein
Hip3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1630
Score = 26.6 bits (56), Expect = 6.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 41 RNIEETTKKMMLASPDYLSFEELGANMID 69
R+I KM+L S D L E+G+ ++D
Sbjct: 1026 RDISPQLTKMLLKSNDILGLREIGSKVVD 1054
>SPAC1486.06 |||nicotinate phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 410
Score = 26.6 bits (56), Expect = 6.8
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 261 YLNLAVCYYKTNK-PKHVLNMCECLDRLIDTEKHCKALYYYGKAHEMLGKTEMAIK--YY 317
Y + V Y TN+ PK LN E + L + + + L+ + + L K +K +Y
Sbjct: 27 YPDAQVSYKYTNRSPKMALNQ-EAYNWLREQIRGLRNLHLLPEEEQWLRKNCPYLKESFY 85
Query: 318 K--KALKLEPKNKEIGKILADLDTKTKDFAVNEKAMWLKAFNVEVP 361
+ + +P+N I + D++TKD ++ +W E+P
Sbjct: 86 EFMHEFEFDPENS----ISLNYDSETKDLSIFIHGLWKNTIFYEIP 127
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 26.6 bits (56), Expect = 6.8
Identities = 11/53 (20%), Positives = 26/53 (49%)
Query: 292 KHCKALYYYGKAHEMLGKTEMAIKYYKKALKLEPKNKEIGKILADLDTKTKDF 344
+H A Y G + G+ + A ++++A ++ P N + + + + KD+
Sbjct: 497 RHYNAWYGLGMVYLKTGRNDQADFHFQRAAEINPNNSVLITCIGMIYERCKDY 549
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.136 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,871,888
Number of Sequences: 5004
Number of extensions: 75222
Number of successful extensions: 178
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 166
Number of HSP's gapped (non-prelim): 17
length of query: 437
length of database: 2,362,478
effective HSP length: 75
effective length of query: 362
effective length of database: 1,987,178
effective search space: 719358436
effective search space used: 719358436
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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