Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001750-TA|BGIBMGA001750-PA|IPR013026|Tetratricopeptide
region, IPR001179|Peptidylprolyl isomerase, FKBP-type,
IPR001440|Tetratricopeptide TPR_1, IPR013105|Tetratricopeptide TPR_2
(437 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 3e-05
SB_44772| Best HMM Match : TPR_2 (HMM E-Value=0) 37 0.037
SB_21064| Best HMM Match : TPR_2 (HMM E-Value=3.5e-09) 37 0.037
SB_1408| Best HMM Match : TPR_1 (HMM E-Value=2.6e-05) 33 0.34
SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10) 33 0.46
SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15) 31 1.4
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 31 1.4
SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0) 31 1.4
SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_42965| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17) 31 1.8
SB_39326| Best HMM Match : TPR_2 (HMM E-Value=3.5e-05) 31 2.4
SB_20703| Best HMM Match : TPR_1 (HMM E-Value=0) 30 3.2
SB_14077| Best HMM Match : TPR_1 (HMM E-Value=0) 30 3.2
SB_25538| Best HMM Match : Kinesin (HMM E-Value=0) 30 4.2
SB_40377| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_22503| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 29 5.6
SB_46974| Best HMM Match : TPR_1 (HMM E-Value=1.5e-10) 29 5.6
SB_45906| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.4
SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.4
SB_25713| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.8
SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 29 9.8
>SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 47.2 bits (107), Expect = 3e-05
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 233 QQAISVLRLSRPGTADEELDIKNNKVNAYLNLAVCYYKTNKPKHVLNMCECLDRLIDTEK 292
Q A+ + L +EE + K +LN+A C+ K + C ++ +D +K
Sbjct: 993 QYAVVIRVLEGYFDEEEEKAVDPIKCAGHLNIAACHLKLGNNFKCIKAC---NKALDIDK 1049
Query: 293 -HCKALYYYGKAHEMLGKTEMAIKYYKKALKLEPKNKEIGKILADLDTKTKDFAVNEKAM 351
+ KAL+ GKA L E + + + + L+L+PKN+E + L ++ KD EK +
Sbjct: 1050 ENIKALFRRGKALLNLKDYEKSKEDFTQVLELDPKNREAREQLKIVNGMLKDHHQKEKKL 1109
Query: 352 WLKAFN--VEVPA-TNAVYDVDATFQSDVLDMCQSLAGR 387
+ F E+ A N + +A + DV A R
Sbjct: 1110 YSNIFERLAEMKAKENKDQEAEAAEKPDVFQQAVDEAER 1148
>SB_44772| Best HMM Match : TPR_2 (HMM E-Value=0)
Length = 845
Score = 36.7 bits (81), Expect = 0.037
Identities = 19/54 (35%), Positives = 26/54 (48%)
Query: 276 HVLNMCECLDRLIDTEKHCKALYYYGKAHEMLGKTEMAIKYYKKALKLEPKNKE 329
H R D + KA + G AH + GK E AI +YK+AL+L K +
Sbjct: 253 HYKEALRLYQRTSDDQGQGKAHLFIGNAHNLQGKYEEAIGHYKEALRLYQKTSD 306
Score = 34.7 bits (76), Expect = 0.15
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 275 KHVLNMCECLDRLIDTEKHCKALYYYGKAHEMLGKTEMAIKYYKKALKLEPKNKE 329
+H + D ++ KA G AH + GK E AI +YK+AL+L + +
Sbjct: 212 EHYKEALRLYQKTSDDQRQGKAHLLIGNAHNLQGKYEEAIGHYKEALRLYQRTSD 266
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 289 DTEKHCKALYYYGKAHEMLGKTEMAIKYYKKALKLEPKNKE 329
D + +A GK H GK E AI +YK+AL+L K +
Sbjct: 626 DDQGQGEAHLLIGKTHNFQGKYEEAIGHYKEALRLYQKTSD 666
>SB_21064| Best HMM Match : TPR_2 (HMM E-Value=3.5e-09)
Length = 372
Score = 36.7 bits (81), Expect = 0.037
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Query: 243 RPGTADEELDIKNNKVNAYLNLAVCYYKTNKPKHVLNMCECLDRLIDTEKHCKALYYYGK 302
+PG +E + + K+ LN + C + V+ + L + + KAL+ K
Sbjct: 259 KPGD-EEWVKLDQMKIPFLLNFSQCKLLLGEYYEVIKHTSTV--LEKDKDNVKALFRRAK 315
Query: 303 AHEMLGKTEMAIKYYKKALKLEPK-NKEIGKILADLDTKTKDFAVNEKAMWLKAF 356
AH+ E A +K+A +L+P K + K +++LD KD ++ K F
Sbjct: 316 AHKACWDPEEARSDFKRAAELDPSLTKVVRKEVSELDQMIKDHNAEDREKMKKLF 370
>SB_1408| Best HMM Match : TPR_1 (HMM E-Value=2.6e-05)
Length = 190
Score = 33.5 bits (73), Expect = 0.34
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 293 HCKALYYYGKAHEMLGKTEMAIKYYKKALKLEPKNKEIGKILADLDTK 340
+ KA GKA L K ++ +K+AL+LEP NK+ + + +L K
Sbjct: 118 YTKAYLRRGKARSHLNKLHESLSDFKEALRLEPGNKQAQQEILNLKQK 165
>SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10)
Length = 559
Score = 33.1 bits (72), Expect = 0.46
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 265 AVCYYKTNKPKHVLNMCECLDRLIDTEKHCKALYYY-GKAHEMLGKTEMAIKYYKKALKL 323
A C+ + KP + C D+ +Y + G+AHE LG E A K +ALKL
Sbjct: 89 ASCFIRMKKPNAAIRDC---DKAAQINPDSAQIYKWRGRAHEFLGHWEKADKDLAQALKL 145
Query: 324 E 324
+
Sbjct: 146 D 146
>SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15)
Length = 206
Score = 31.5 bits (68), Expect = 1.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 295 KALYYYGKAHEMLGKTEMAIKYYKKALKLEPKNKE 329
K Y K H +G A++ +K L+L+PKNK+
Sbjct: 103 KGHYRAAKCHLAMGSASNALREIRKVLELDPKNKD 137
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 31.5 bits (68), Expect = 1.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 163 GVPPRIRPEPALFVIVLYDVKDNY 186
G PP++ +PA+ VI + D+ DNY
Sbjct: 1301 GEPPQLSRDPAIVVITIEDINDNY 1324
>SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1981
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 249 EELDIKNNKVNAYLNLAVCYYK----TNKPKHVLNMCECLDRLIDTEKHCKALYYYGKAH 304
+EL K N+ A NL Y TN + +L D CKA + G AH
Sbjct: 549 QELKDKMNESVALSNLGNFYSSCGEFTNAVPYYEKFLNVTRQLGDHAGECKACHNLGFAH 608
Query: 305 EMLGKTEMAIKYYKKALKL 323
LG A+K+Y++ + L
Sbjct: 609 FSLGNHSEAVKFYERNVAL 627
>SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1061
Score = 31.1 bits (67), Expect = 1.8
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Query: 256 NKVNAYLNLAVCYYKTNKPKHVLNMCECLDRLIDTEKHCKALYYYGKAH--EMLGKTEMA 313
N + A L A ++ K+ L + + + T +C G H L K + A
Sbjct: 129 NNIPALLGKACIFFNKRDYKNALAFYK---KALRTNPNCPGAVRLGMGHCFVKLNKLDKA 185
Query: 314 IKYYKKALKLEPK--NKEIGKILADLDTKTKDFAVNEKAMWLKAFN-VEVPATNA 365
+K+AL+LEP+ +G + +L++K KD++ + + L AF+ EV A A
Sbjct: 186 RLAFKRALELEPRCTGAMVGLAILELNSK-KDYS-KVQHLALHAFHGTEVEAMQA 238
>SB_42965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 289 DTEKHCKALYYYGKAHEMLGKTEMAIKYYKKALKLEPKNKE 329
D + +A GK H GK E AI +YK+AL+L K +
Sbjct: 521 DVQGQGEAHLRIGKTHYQQGKYEEAIGHYKEALRLYQKTSD 561
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 289 DTEKHCKALYYYGKAHEMLGKTEMAIKYYKKALKLEPKNKE 329
D + KA GK H GK E A +YK+AL+L K+ +
Sbjct: 401 DDQGQGKANLLIGKTHYQQGKYEEARGHYKEALRLYQKSSD 441
>SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17)
Length = 455
Score = 31.1 bits (67), Expect = 1.8
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 248 DEELDIKNNKVNAYLNLAVCYYKTNKPKHVL-NMCECLDRLIDTEKHCKALYYYGKAHEM 306
+++ + + K Y N A C K K + + + + LD ++ + KAL+ +A E
Sbjct: 43 EKDKEKQKEKAVIYKNRAACQLKLEKYEAAIKDATKALD-IVPNDP--KALFRRSQAFEA 99
Query: 307 LGKTEMAIKYYKKALKLEPKNKEI 330
G+ E A K + LEPK++ +
Sbjct: 100 TGRLEEAFKDARTLSHLEPKSERV 123
>SB_39326| Best HMM Match : TPR_2 (HMM E-Value=3.5e-05)
Length = 187
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 295 KALYYYGKAHEMLGKTEMAIKYYKKALKLEPKNKEIGKILADLDTKTKDFAVNEKAMW 352
KAL+ GK G+ A+ KKA +L+P NK I L L + E++M+
Sbjct: 12 KALFRKGKVLASKGELSEALPLIKKANQLDPNNKTIRAELRSLRKRKSIQDEKERSMY 69
>SB_20703| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 693
Score = 30.3 bits (65), Expect = 3.2
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 254 KNNKVNAYLNLAVCYYKTNKPKHVLNMCE-CLDRLIDT---EKHCKALYYYGKAHEMLGK 309
++++ + LN+ Y + + C+ L I T K G + LG
Sbjct: 48 ESDQADVRLNIGAVYQSKGNYEEAMKYCQQALQVYISTGNESKQADVRQSIGLVQQSLGN 107
Query: 310 TEMAIKYYKKALKL 323
E AIKYY++AL++
Sbjct: 108 YEEAIKYYQQALQV 121
>SB_14077| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 357
Score = 30.3 bits (65), Expect = 3.2
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 254 KNNKVNAYLNLAVCYYKTNKPKHVLNMCE-CLDRLIDT---EKHCKALYYYGKAHEMLGK 309
++++ + LN+ Y + + C+ L I T K G + LG
Sbjct: 48 ESDQADVRLNIGAVYQSKGNYEEAMKYCQQALQVYISTGNESKQADVRQSIGLVQQSLGN 107
Query: 310 TEMAIKYYKKALKL 323
E AIKYY++AL++
Sbjct: 108 YEEAIKYYQQALQV 121
>SB_25538| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 711
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 311 EMAIKYYKKALKLEPKNKEIGKILADLDTKTKDFAVNEKAM 351
E+A+ Y +K +++ KNKE K+ ++ TK + + KA+
Sbjct: 407 ELAVNYDQKLQEVDAKNKENDKLNDEITTKQVELSKTTKAL 447
>SB_40377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 29.5 bits (63), Expect = 5.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 286 RLIDTEKHCKALYYYGKAHEMLGKTEMAIKYYKKALKLEPKNKE 329
R + +H + Y K M E A++ Y++ LKLEP+N E
Sbjct: 137 RALPITQHYRIWPLYLKFVRMYPVYETAVRVYRRYLKLEPENTE 180
>SB_22503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 29.5 bits (63), Expect = 5.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 286 RLIDTEKHCKALYYYGKAHEMLGKTEMAIKYYKKALKLEPKNKE 329
R + +H + Y K M E A++ Y++ LKLEP+N E
Sbjct: 30 RALPITQHYRIWPLYLKFVRMYPVYETAVRVYRRYLKLEPENTE 73
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.5 bits (63), Expect = 5.6
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 259 NAYLNLAVCYYKTNKPKHVLNMCEC-LDRLIDTEKHCKALY-YYGKAHEMLGKTEMAIKY 316
NA+ + + YYK K N+ E + + LY + G + K+E A+
Sbjct: 1436 NAWYGVGMIYYKQEK----FNLAEVHFRKALSINPSSSVLYCHVGVVQHAMRKSEAALAT 1491
Query: 317 YKKALKLEPKN 327
KA+ ++PKN
Sbjct: 1492 INKAMLIDPKN 1502
>SB_46974| Best HMM Match : TPR_1 (HMM E-Value=1.5e-10)
Length = 466
Score = 29.5 bits (63), Expect = 5.6
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 289 DTEKHCKALYYYGKAHEMLGKTEMAIKYYKKALKLEPKNKEI 330
D E CKA G A + A+K Y+ ALK++P N+ +
Sbjct: 409 DDEYRCKAYVRRGTAAYHSEEYVEALKDYESALKIDPNNESL 450
>SB_45906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 685
Score = 29.1 bits (62), Expect = 7.4
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 137 IGLTMVKGPQARLNLLVQPAAAWG--PRGVPPRIRPEPALFVIVLYDVK--DNYAATRFN 192
+G + PQ + L + WG P GVP + P LF++++ D++ D + +
Sbjct: 516 LGRRLSDAPQTAVKLSSDCLSEWGQVPAGVPQGTKLGPWLFLLMINDLRLADTHTWKYVD 575
Query: 193 DLPMAE 198
D +AE
Sbjct: 576 DTTIAE 581
>SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1769
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Query: 261 YLNLAVCYYKTNKPKHVLNMCE-CL 284
+ N A+C+ K NKPK L CE CL
Sbjct: 901 FSNRALCHLKLNKPKEALADCESCL 925
>SB_25713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 75
Score = 28.7 bits (61), Expect = 9.8
Identities = 13/45 (28%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 291 EKHCKALYYYGKAHE--MLGKTEMAIKYYKKALKLEPKNKEIGKI 333
++H L+ +G+ + LGK E+A+ Y + KL+ K++E ++
Sbjct: 21 DRHMSELHRHGEEVQDLQLGKDEVAVMYKQMEQKLQKKDEETSRL 65
>SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30)
Length = 592
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 267 CYYKTNKPKHVLNMCECLDRLIDTEKHCKALYYYGKAHEMLGKTEMAIKYYKKALKLEPK 326
CY K K E L + + K LY +A +G E A+ YY + KL P+
Sbjct: 59 CYLKLGKNDAAYRDAEAA--LEEDKDFNKGLYQKAEALYAMGDFEYALVYYHRGNKLRPE 116
Query: 327 NKE 329
+E
Sbjct: 117 LQE 119
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.136 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,415,812
Number of Sequences: 59808
Number of extensions: 542856
Number of successful extensions: 1475
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1450
Number of HSP's gapped (non-prelim): 36
length of query: 437
length of database: 16,821,457
effective HSP length: 84
effective length of query: 353
effective length of database: 11,797,585
effective search space: 4164547505
effective search space used: 4164547505
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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