GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001750-TA|BGIBMGA001750-PA|IPR013026|Tetratricopeptide
region, IPR001179|Peptidylprolyl isomerase, FKBP-type,
IPR001440|Tetratricopeptide TPR_1, IPR013105|Tetratricopeptide TPR_2
         (437 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    28   0.57 
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    26   2.3  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    24   7.1  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 27.9 bits (59), Expect = 0.57
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 301 GKAHEMLGKTEMAIKYYKKALKLEPKNKEIGKILADL 337
           G+ +   G +E A + ++K LK +P N E  KIL  L
Sbjct: 347 GQMYIYRGDSENAAQCFEKVLKAQPGNYETMKILGSL 383


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 25.8 bits (54), Expect = 2.3
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 7/85 (8%)

Query: 71  MSTGDVKMLIIEEG-----KGPLVPVDSEVTIHYAAYWEKAVIPFDSTLTMNMGAPKRLR 125
           ++  DV +  IEEG     + PL+ V   + I      E  ++   +  ++      R R
Sbjct: 75  LTAKDVTLYAIEEGSVAFPRVPLIKVAGPLII--VQLLETTLLTLVNYASLMATNAARYR 132

Query: 126 LGTGKIIPGLEIGLTMVKGPQARLN 150
           +  GK I  LE GL   +GP   L+
Sbjct: 133 MVAGKHIHLLEFGLRRAQGPDGGLS 157


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 24.2 bits (50), Expect = 7.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query: 96  TIHYAAYWEKAVIPFDSTLTMNMGAPKRLRLGTGKII 132
           ++H  A WE A +P D     +    KR   G GKI+
Sbjct: 454 SLHENATWEIASLPKDRKAVGSKWVFKRKMDGDGKIV 490


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.136    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 410,401
Number of Sequences: 2123
Number of extensions: 15839
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 6
length of query: 437
length of database: 516,269
effective HSP length: 66
effective length of query: 371
effective length of database: 376,151
effective search space: 139552021
effective search space used: 139552021
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)