GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001749-TA|BGIBMGA001749-PA|undefined
         (97 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095039-1|AAM11367.1| 1710|Drosophila melanogaster LD28380p pro...    26   6.3  
AE014134-2294|AAF53256.2| 1710|Drosophila melanogaster CG16972-P...    26   6.3  

>AY095039-1|AAM11367.1| 1710|Drosophila melanogaster LD28380p
           protein.
          Length = 1710

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 11/78 (14%)

Query: 10  IKVVLHGMACGSETSVLICV-----GHVLGL------GASCVVGTALVEPVTGGRDRARA 58
           I V   G+AC  E +  I +     G +LGL         C+ GTA +E V      A A
Sbjct: 224 IIVATQGVACEQEFARAIMMAGNGTGALLGLLSEESDANECLNGTAYIEEVVEDMGVAEA 283

Query: 59  RLNLSRHVLTIRRALNRP 76
           RL    +V     AL +P
Sbjct: 284 RLAAGNNVYLSDAALEQP 301


>AE014134-2294|AAF53256.2| 1710|Drosophila melanogaster CG16972-PA
           protein.
          Length = 1710

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 11/78 (14%)

Query: 10  IKVVLHGMACGSETSVLICV-----GHVLGL------GASCVVGTALVEPVTGGRDRARA 58
           I V   G+AC  E +  I +     G +LGL         C+ GTA +E V      A A
Sbjct: 224 IIVATQGVACEQEFARAIMMAGNGTGALLGLLSEESDANECLNGTAYIEEVVEDMGVAEA 283

Query: 59  RLNLSRHVLTIRRALNRP 76
           RL    +V     AL +P
Sbjct: 284 RLAAGNNVYLSDAALEQP 301


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.328    0.141    0.422 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,335,420
Number of Sequences: 52641
Number of extensions: 143085
Number of successful extensions: 348
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 348
Number of HSP's gapped (non-prelim): 2
length of query: 97
length of database: 24,830,863
effective HSP length: 73
effective length of query: 24
effective length of database: 20,988,070
effective search space: 503713680
effective search space used: 503713680
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 54 (25.8 bits)