Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001749-TA|BGIBMGA001749-PA|undefined
(97 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g31330.1 68417.m04444 expressed protein contains Pfam profile... 29 0.64
At3g62020.1 68416.m06966 germin-like protein (GLP10) identical t... 28 0.84
At2g05760.1 68415.m00620 xanthine/uracil permease family protein... 28 1.1
At2g18660.1 68415.m02174 expansin family protein (EXPR3) identic... 27 1.5
At1g24140.1 68414.m03045 matrixin family protein similar to matr... 27 2.0
At3g14360.1 68416.m01817 lipase class 3 family protein low simil... 27 2.6
At2g34000.1 68415.m04163 zinc finger protein-related contains we... 26 3.4
At2g30630.2 68415.m03733 expressed protein similar to H1-1flk [A... 26 3.4
At2g30630.1 68415.m03732 expressed protein similar to H1-1flk [A... 26 3.4
At1g59970.1 68414.m06755 matrixin family protein similar to SP|P... 26 4.5
At1g56145.1 68414.m06448 leucine-rich repeat family protein / pr... 26 4.5
At4g02390.1 68417.m00323 poly (ADP-ribose) polymerase / NAD(+) A... 25 7.9
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 25 7.9
At1g70170.1 68414.m08074 matrixin family protein similar to SP|P... 25 7.9
>At4g31330.1 68417.m04444 expressed protein contains Pfam profile
PF04654: Protein of unknown function, DUF599
Length = 239
Score = 28.7 bits (61), Expect = 0.64
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 5 IAIRTIKVVLHGMACGSETSVLICVGHVLGLGASCVVGTALVEPVTGGR 53
+A++T++ + G + TS+L+C G L ++ V L + V G R
Sbjct: 64 LAVQTLRNCIMGSTLMATTSILLCAGLAAVLSSTYAVKKPLNDAVFGAR 112
>At3g62020.1 68416.m06966 germin-like protein (GLP10) identical to
germin-like protein subfamily 2 member 4 [SP|Q9M263]
Length = 220
Score = 28.3 bits (60), Expect = 0.84
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 5 IAIRTIKVVLHGMACGSETSVLICVGHVLGLGASCVVGTALVEPVTGGRDRARARLN 61
+A RT + ++G C E+++ G+G VV + VTG A LN
Sbjct: 32 VADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLN 88
>At2g05760.1 68415.m00620 xanthine/uracil permease family protein
contains Pfam profile: PF00860 permease family
Length = 520
Score = 27.9 bits (59), Expect = 1.1
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 22 ETSVLICVGHVLGLGASCVVGTALVEPVTGGRDRARARL 60
ET +L ++L LG S + AL+ P GG D RAR+
Sbjct: 27 ETVLLAFQNYILMLGTSAFI-PALLVPAMGGSDGDRARV 64
>At2g18660.1 68415.m02174 expansin family protein (EXPR3) identical
to Expansin-related protein 3 precursor
(Ath-ExpGamma-1.2) (Swiss-Prot:Q9ZV52) [Arabidopsis
thaliana]; contains Prosite PS00092: N-6
Adenine-specific DNA methylases signature;
Length = 130
Score = 27.5 bits (58), Expect = 1.5
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 15 HGMACGSETSVLICVGHVLGLGASCVVGTALVEPVTGGRDRARARLNLSRHVLTI 69
+G ACG V C+G +C T V+ V R+ LNLSR +
Sbjct: 61 NGRACGRRYRVR-CIGATYNFDRACTGRTVDVKVVDFCREPCNGDLNLSRDAFRV 114
>At1g24140.1 68414.m03045 matrixin family protein similar to matrix
metalloproteinase [Cucumis sativus] GI:7159629; contains
InterPro accession IPR001818: Matrixin
Length = 384
Score = 27.1 bits (57), Expect = 2.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 29 VGHVLGLGASCVVGTALVEPVTGGR 53
+GH+LGLG S V G+ + + GR
Sbjct: 287 IGHLLGLGHSSVEGSIMYPTIRTGR 311
>At3g14360.1 68416.m01817 lipase class 3 family protein low
similarity to Chain A, Lipase Ii From Rhizopus Niveus
GI:1942798; contains Pfam profile PF01764: Lipase
Length = 518
Score = 26.6 bits (56), Expect = 2.6
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 1 MIDRIAIRTIKVVLHGMACGSETSVLICVGHVLGLGASCVVGTALV 46
M++R A ++V+L + E + + GH LG + + T LV
Sbjct: 308 MVERSAYYAVRVILKRLLSEHENARFVVTGHSLGGALAILFPTLLV 353
>At2g34000.1 68415.m04163 zinc finger protein-related contains weak
hit to Pfam profile: PF00097 zinc finger, C3HC4 type
(RING finger)
Length = 151
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 28 CVGHVLGLGASCVVGTALVEPVTGGRDRARARL 60
C+G L A+C V L EP+T D+ R+
Sbjct: 118 CIGKWLESHATCPVCRRLAEPMTSNGDKVLERI 150
>At2g30630.2 68415.m03733 expressed protein similar to H1-1flk
[Arabidopsis thaliana] GI:388260
Length = 552
Score = 26.2 bits (55), Expect = 3.4
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 13 VLHGMACGSETSVLICVGHVLGLGASCVVGTALVEPVTGGRDRARARLNLSRHVLTIRRA 72
V+ +A + VL+ +G +G G S V+ L EP G D + + I RA
Sbjct: 236 VMAPVAHKDRSPVLLLMGGGMGAGKSTVLKDILKEPFWAGADAVVIEADAFKESDVIYRA 295
Query: 73 LN 74
L+
Sbjct: 296 LS 297
>At2g30630.1 68415.m03732 expressed protein similar to H1-1flk
[Arabidopsis thaliana] GI:388260
Length = 531
Score = 26.2 bits (55), Expect = 3.4
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 13 VLHGMACGSETSVLICVGHVLGLGASCVVGTALVEPVTGGRDRARARLNLSRHVLTIRRA 72
V+ +A + VL+ +G +G G S V+ L EP G D + + I RA
Sbjct: 215 VMAPVAHKDRSPVLLLMGGGMGAGKSTVLKDILKEPFWAGADAVVIEADAFKESDVIYRA 274
Query: 73 LN 74
L+
Sbjct: 275 LS 276
>At1g59970.1 68414.m06755 matrixin family protein similar to
SP|P29136 Metalloendoproteinase 1 precursor (EC
3.4.24.-) (SMEP1) {Glycine max}; contains InterPro
accession IPR001818: Matrixin
Length = 360
Score = 25.8 bits (54), Expect = 4.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 29 VGHVLGLGASCVVGTALVEPVTGG 52
+GH+LGLG S V + ++GG
Sbjct: 272 IGHLLGLGHSSVEDAIMFPAISGG 295
>At1g56145.1 68414.m06448 leucine-rich repeat family protein /
protein kinase family protein contains Pfam profiles:
PF00069: Eukaryotic protein kinase domain, multiple
PF00560: Leucine Rich Repeat
Length = 1012
Score = 25.8 bits (54), Expect = 4.5
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 10 IKVVLHGMACGSETSVLICVGHVLGLGASCVVGTALVEPVTGGRDRA 56
I V + + S+ +++I VG ++G G C++ A++ + R RA
Sbjct: 613 IPTVKNKLPSKSKKNIVIIVGAIVGAGMLCILVIAILLFIRRKRKRA 659
>At4g02390.1 68417.m00323 poly (ADP-ribose) polymerase / NAD(+)
ADP-ribosyltransferase / poly[ADP-ribose] synthetase
(APP) identical to SP|Q11207 Poly [ADP-ribose]
polymerase (EC 2.4.2.30) (PARP) (ADPRT) (NAD(+) ADP-
ribosyltransferase) (Poly[ADP-ribose] synthetase)
{Arabidopsis thaliana}
Length = 637
Score = 25.0 bits (52), Expect = 7.9
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 56 ARARLNLSRHVLTIRRALNRPPIFYGQLRLPCRISSVRNNS 96
A + L+ +L++ L P++Y +L C ++ V N+S
Sbjct: 392 ALGEIELATKLLSVDPGLQDDPLYYHYQQLNCGLTPVGNDS 432
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 25.0 bits (52), Expect = 7.9
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 13 VLHGMACGSETSVLI--CVGHVLGLGASC 39
+LHG+ S TS I V H LGLG C
Sbjct: 348 LLHGLGIVSSTSTSIDAIVPHGLGLGLPC 376
>At1g70170.1 68414.m08074 matrixin family protein similar to
SP|P29136 Metalloendoproteinase 1 precursor (EC
3.4.24.-) (SMEP1) {Glycine max}; contains InterPro
accession IPR001818: Matrixin
Length = 378
Score = 25.0 bits (52), Expect = 7.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 29 VGHVLGLGASCVVGTALVEPVTGGR 53
+GH+LGLG S V + + +T G+
Sbjct: 282 IGHLLGLGHSSVEESIMYPTITTGK 306
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.328 0.141 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,043,831
Number of Sequences: 28952
Number of extensions: 65313
Number of successful extensions: 162
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 151
Number of HSP's gapped (non-prelim): 14
length of query: 97
length of database: 12,070,560
effective HSP length: 70
effective length of query: 27
effective length of database: 10,043,920
effective search space: 271185840
effective search space used: 271185840
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 52 (25.0 bits)
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