Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001748-TA|BGIBMGA001748-PA|IPR007205|Protein of unknown
function DUF383, IPR007206|Protein of unknown function DUF384
(361 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.12c |||conserved eukaryotic protein|Schizosaccharomyces... 124 2e-29
SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pomb... 30 0.44
SPAC926.09c |fas1||fatty acid synthase beta subunit Fas1|Schizos... 30 0.58
SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|ch... 29 0.77
SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pomb... 28 1.8
SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces pomb... 28 1.8
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 28 2.4
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 28 2.4
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce... 27 4.1
SPBC887.17 |||uracil permease |Schizosaccharomyces pombe|chr 2||... 27 4.1
SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase |Schizo... 27 4.1
SPAC1B3.01c |||uracil phosphoribosyltransferase |Schizosaccharom... 27 5.4
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 27 5.4
SPBC216.06c |swi1||replication fork protection complex subunit S... 27 5.4
SPAC27E2.03c |||GTP binding protein |Schizosaccharomyces pombe|c... 26 7.2
SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces pom... 26 7.2
SPBC1604.15 |gpi16||pig-T |Schizosaccharomyces pombe|chr 2|||Manual 26 7.2
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 26 9.5
SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr ... 26 9.5
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 26 9.5
>SPAC26F1.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 356
Score = 124 bits (299), Expect = 2e-29
Identities = 93/281 (33%), Positives = 149/281 (53%), Gaps = 21/281 (7%)
Query: 62 EIAKHALLMLVNISAYTRGATELLKYKPLRYKNIIDLLISYVLNPNKTDADAACMTLSNI 121
+IA A+ LVN+S E ++ K L + L+ S V NP AD +CM L N+
Sbjct: 60 QIASQAVTALVNVSQ-----NEKVR-KVLMDDEFLQLIFSIVTNPLHGLADLSCMLLCNL 113
Query: 122 TRLED-----ELEVCLNTFIPHLN---DIMNAFVN-TEFN-KTGSNLHYLAPMFSNLACS 171
+ ED +++V L F N +M+ FV T+ +N +LA +F+++
Sbjct: 114 AKEEDFARILDMQVPLREFSLSKNIIDQLMDLFVKGTDHGINEYANFDFLANVFADMTRF 173
Query: 172 HRIRKWLC--EENPHV-PLIKLIPFCNYDVSNIRKGGAIGTIRNISFDTDYHEFLVSPD- 227
R RK+ +E HV P KL+ F + S +R+ G I+NISFD + + L+ +
Sbjct: 174 ERGRKYFTTLQEYDHVIPASKLVVFTEHK-SLLRRTGVAAIIKNISFDIPFQKVLMDEEG 232
Query: 228 LDLLTYILYPLMGNEDYPDDEMEPLPVTLQYLPKEKRREPDIDIRILILETLNKLCAQRR 287
+++L Y+L PL G E+ +++M+ + LQ LP +K+REPD I ++ETL L A R
Sbjct: 233 INVLPYLLLPLAGPEELSEEDMDGMFDELQLLPDDKKREPDHFIMKTLVETLVLLTATRE 292
Query: 288 GRPYLRENGVYYIMREYHKWEKDPKALIACENVVDILIQKE 328
GR ++R VY I+RE H D + C+ +V +L++ E
Sbjct: 293 GREHMRRRKVYPIIRELHLNVDDEEIREVCDQLVQMLVRDE 333
>SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1647
Score = 30.3 bits (65), Expect = 0.44
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 178 LCEENPHV--PLIKLIPFCNYDVSNIRKGGAIGTIRNISFDTDYHEFL-VS-----PDLD 229
LCE ++ I IP + VS I K A G I +S D+ EF+ +S +L+
Sbjct: 161 LCENGNNLVKTCIDTIPILDNKVSEILKSEAGGQILGVSEVVDFQEFIRLSHEAHVAELE 220
Query: 230 LLTYILYPLMGNEDYPDDEMEPLPVTLQ 257
++ ILY L + + + E L V L+
Sbjct: 221 TISVILYQLAKVDLFQNSHFESLLVMLR 248
>SPAC926.09c |fas1||fatty acid synthase beta subunit
Fas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2073
Score = 29.9 bits (64), Expect = 0.58
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 213 ISFDTDYHEFLVSPDLDLLTYILYPLMGNEDYPDDEMEPLPVTLQYLPKEKRREPDIDIR 272
+S TD F+ + + L T + + +P + P V E P + +R
Sbjct: 279 VSASTDSASFMENAKVALTTLFWIGVRSQQTFPTTTLPPSVVADSLASSEGNPTPMLAVR 338
Query: 273 ILILETLNK 281
L +ETLNK
Sbjct: 339 DLPIETLNK 347
>SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 611
Score = 29.5 bits (63), Expect = 0.77
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 49 TQAVIELTD-DRIKEIAKHALLMLVNISAYTRGATELLKYKPLRYKNIIDLLISYVLNPN 107
TQ +E++ D+ EI + +LV + ++ +G T ++ + Y++ ID S +
Sbjct: 251 TQIDLEMSFVDKPHEIMEVVEDLLVRLVSFAKGITLAKPFQHITYQHAIDKYGS-----D 305
Query: 108 KTDADAACMTLSNITRLEDELEVCLNTFIPHLNDIMNAFVNTEFNK 153
K D + L NIT L + + ++T I ND+ ++ N E K
Sbjct: 306 KPDIRFE-LPLKNITSLLPKQDPLISTEILVYNDLSHSLSNAESRK 350
>SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1428
Score = 28.3 bits (60), Expect = 1.8
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 21 LRHIS-MDYLVSLSGTEDGVNKMLEHERITQAVIELTDDRIK-EIAKHALLMLVNISAYT 78
L H + +D+L + S +L I + +ELT + ++A H M +++ A
Sbjct: 797 LNHFTILDFLKTKSAKTPTSPAILTFNAIEKTKVELTWAHFELKVASHVEYMQLSVKAKA 856
Query: 79 RGATELLKYKPLRY 92
R LL Y PL +
Sbjct: 857 RSHILLLYYDPLEF 870
>SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 28.3 bits (60), Expect = 1.8
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 245 PDDEMEPLPVTLQYLPKEKRREPDIDIRILILETLNKLCAQRRG-RPYLRE-----NGVY 298
P+ +EPL +Q L +E + DID ++ + LC + R Y+ E + Y
Sbjct: 246 PNSLIEPLGKIIQVLKREVVVKSDIDDEKIVFDEKTVLCFEDRSIIGYIHETFGPVSSPY 305
Query: 299 YIMREYHKWEKDPKALIAC 317
YI+R E++ A+ AC
Sbjct: 306 YIVR--FSTEEECSAINAC 322
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 285 QRRGRPYLRENGVYYIMR-EYHKWEKDP 311
QR PYL GV+Y R Y K EK P
Sbjct: 355 QRENSPYLPYKGVFYNTRPPYRKLEKQP 382
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 27.9 bits (59), Expect = 2.4
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Query: 18 RIDLRHISMDYLVSLSGTEDGVNKMLEHERITQAVIELTDDRIKEIAKH--ALLMLVNIS 75
++ L H+ D+ L GT G L++E +L I K AL +V+ S
Sbjct: 498 QLPLAHLVEDFFGRLKGTTSGF-ATLDYEESDYVPADLVRLSIFMSGKSVDALCSIVHRS 556
Query: 76 -AYTRGATELLKYKPLRYKNIIDLLISYVLNPNKTDADAACMTLSNIT 122
A RG + + KPL K + ++++ V++ ++ N+T
Sbjct: 557 LALQRGREWIQRLKPLVPKQLYEVILQAVIDNRVVARESISALRKNVT 604
>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2100
Score = 27.1 bits (57), Expect = 4.1
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 70 MLVNISAYTRGATE-LLKYKPLRYKNIIDLLISYVLNPNKTDADAA------CMTLSNIT 122
+LVN+ YT G+TE + K + ++ II L+I + + A+ + S ++
Sbjct: 1662 LLVNVVKYTEGSTEGTVSSKSVLFRKIIALIIGVFAELHNSMAEFVHQKTFFRLFSSILS 1721
Query: 123 RLEDELEVCLNTFIPHLNDIMNAFV 147
L+D +V + F+ + I+ F+
Sbjct: 1722 ELDDAKDVLESCFVDIYSVILECFL 1746
>SPBC887.17 |||uracil permease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 625
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 15 PESRIDLRHISMDYLVSLSGTEDGVNKMLEHERITQ---AVIELTDDRI 60
P+ R + + +++ S S +EDG N+ HE +T ++ ++ D+RI
Sbjct: 543 PDDRKAMDNATLEMATSRSYSEDGKNEKTTHEDVTMKETSLKKMDDERI 591
>SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 303 EYHKWEKDPKALIACENVVDILIQKEDEVGAEDLSTVEVPEELRERFNKTNSDFMMNL 360
E H W K A + + +++D + D + VPE +RER + F +++
Sbjct: 299 EDHSWANYVKVNKAFADTIVDNYEQDDMIWINDYHLLLVPEMVRERLPRAKIGFFLHI 356
>SPAC1B3.01c |||uracil phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 219
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 300 IMREYHKWEKDPKALIACENVVDILIQKEDEVGAEDLSTVEVPEELRERF 349
IMR E+ + + ILIQ+++E L +++PE++ +R+
Sbjct: 84 IMRAGESMEQGLRECCRSVRIGKILIQRDEETHKPVLHYIKLPEDISKRY 133
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 26.6 bits (56), Expect = 5.4
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 107 NKTDADAACMTLSNITRLEDELE---VCLNTFIPHLNDIMNAFVNTEF 151
NK DA+ CM I+R+ E + N P ND +N+ VN EF
Sbjct: 3 NKPDANDQCMVKETISRMSMSKEKPFLRRNYSSPSFNDSVNS-VNDEF 49
>SPBC216.06c |swi1||replication fork protection complex subunit
Swi1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 971
Score = 26.6 bits (56), Expect = 5.4
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 108 KTDADAACMTLSNITRLEDELEVCLNTFIPHLNDIMNAFVNTEFNKTGSN 157
K A AC+ N + L DEL+V LN I I A N N+ G++
Sbjct: 705 KVAAVVACLINENKSDLLDELKVQLNCLISERKLITLADENKYINEGGND 754
>SPAC27E2.03c |||GTP binding protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 392
Score = 26.2 bits (55), Expect = 7.2
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 4 DSFDELIEFLKPESRIDLRHISMDYLVSLSGTEDGV---NKMLEHERITQAVIEL 55
+ FD L E KP+SR+ D G GV N L H R A+ ++
Sbjct: 68 ERFDWLCEAYKPKSRVPAFLTVFDIAGLTKGASTGVGLGNAFLSHVRAVDAIYQV 122
>SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 986
Score = 26.2 bits (55), Expect = 7.2
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 223 LVSPD-LDLLTYILYP--LMGNEDYPDDEMEPLPVTLQYLPKEKRREPDIDIRILILETL 279
LVS D L+ + Y L+ N DYPD+ E +P L L + E I+ + +L+ L
Sbjct: 98 LVSLDNFTLIKAVAYAVSLIANVDYPDEWPEVVPAVLHLL--QSTNENSINASLDVLDEL 155
>SPBC1604.15 |gpi16||pig-T |Schizosaccharomyces pombe|chr 2|||Manual
Length = 545
Score = 26.2 bits (55), Expect = 7.2
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 9/48 (18%)
Query: 178 LCEENPHVPLIKLIPFCNYDVSNIRKGGAIGTI-RNISFDTDYHEFLV 224
+C EN PL KL+P C RK G + ++ FDTD+H F +
Sbjct: 181 VCTENLS-PLFKLLP-CK------RKAGIASLLDSHLFFDTDWHSFSI 220
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 25.8 bits (54), Expect = 9.5
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 211 RNISFDTDYHEFLVSPDLDLLTYILYP 237
R + F T + L+SP++DL T+I+ P
Sbjct: 311 RRLVFQTITAKMLLSPEVDLDTFIMRP 337
>SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 25.8 bits (54), Expect = 9.5
Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 156 SNLHYLAPMF-SNLACSHRIRKWLCEENPHVP 186
SN+ +++ + +L +H I KWL + H+P
Sbjct: 371 SNVDHMSSLILGSLKLAHAIMKWLVSDVEHIP 402
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 25.8 bits (54), Expect = 9.5
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 303 EYHKWEKDPKALIACENVVDILIQKEDEVGAEDLSTVEVPE 343
E +WE + A E+ +D EDEVG D +T E E
Sbjct: 1941 EEFEWEDEDNASSGYEDELDY---NEDEVGENDSTTFEAME 1978
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.139 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,807,602
Number of Sequences: 5004
Number of extensions: 83992
Number of successful extensions: 234
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 224
Number of HSP's gapped (non-prelim): 22
length of query: 361
length of database: 2,362,478
effective HSP length: 74
effective length of query: 287
effective length of database: 1,992,182
effective search space: 571756234
effective search space used: 571756234
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)
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